RNA–Protein interactions for RNA: ENST00000490166.1

RPN1-205, Transcript of ribophorin I, humanhuman

TSL 3

Gene RPN1, Length 573 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPN1-205ENST00000490166 ZAR1Q86SH2 424 aa4.34□□□□□ -1.71
RPN1-205ENST00000490166 RTN4RL1Q86UN2 441 aaPredicted RBP4.34□□□□□ -1.71
RPN1-205ENST00000490166 ZNF410Q86VK4 478 aa4.34□□□□□ -1.71
RPN1-205ENST00000490166 PALB2Q86YC2 1186 aa4.34□□□□□ -1.71
RPN1-205ENST00000490166 EXOC8Q8IYI6 725 aa4.34□□□□□ -1.71
RPN1-205ENST00000490166 KREMEN2Q8NCW0 462 aa4.34□□□□□ -1.71
RPN1-205ENST00000490166 RDM1Q8NG50 284 aa4.34□□□□□ -1.71
RPN1-205ENST00000490166 PRPF31Q8WWY3 499 aaKnown RBP4.34□□□□□ -1.71
RPN1-205ENST00000490166 RIN2Q8WYP3 895 aaPredicted RBP4.34□□□□□ -1.71
RPN1-205ENST00000490166 P2RX5Q93086 422 aa4.34□□□□□ -1.71
RPN1-205ENST00000490166 NKD1Q969G9 470 aa4.34□□□□□ -1.71
RPN1-205ENST00000490166 ACSF2Q96CM8 615 aaPredicted RBP4.34□□□□□ -1.71
RPN1-205ENST00000490166 WDR89Q96FK6 387 aaPredicted RBP4.34□□□□□ -1.71
RPN1-205ENST00000490166 ZNF274Q96GC6 653 aaPredicted RBP4.34□□□□□ -1.71
RPN1-205ENST00000490166 B3GALT6Q96L58 329 aa4.34□□□□□ -1.71
RPN1-205ENST00000490166 DRC1Q96MC2 740 aa4.34□□□□□ -1.71
RPN1-205ENST00000490166 TBC1D32Q96NH3 1257 aa4.34□□□□□ -1.71
RPN1-205ENST00000490166 FANCD2OSQ96PS1 177 aa4.34□□□□□ -1.71
RPN1-205ENST00000490166 CDCA3Q99618 268 aaPredicted RBP4.34□□□□□ -1.71
RPN1-205ENST00000490166 EIF2AK1Q9BQI3 630 aaKnown RBP4.34□□□□□ -1.71
RPN1-205ENST00000490166 PHF7Q9BWX1 381 aaPredicted RBP4.34□□□□□ -1.71
RPN1-205ENST00000490166 RAB34Q9BZG1 259 aa4.34□□□□□ -1.71
RPN1-205ENST00000490166 NXF3Q9H4D5 531 aaKnown RBP4.34□□□□□ -1.71
RPN1-205ENST00000490166 SLITRK6Q9H5Y7 841 aa4.34□□□□□ -1.71
RPN1-205ENST00000490166 TTC12Q9H892 705 aaPredicted RBP4.34□□□□□ -1.71
RPN1-205ENST00000490166 NGRNQ9NPE2 291 aaKnown RBP4.34□□□□□ -1.71
RPN1-205ENST00000490166 CD320Q9NPF0 282 aa4.34□□□□□ -1.71
RPN1-205ENST00000490166 MAN1C1Q9NR34 630 aa4.34□□□□□ -1.71
RPN1-205ENST00000490166 UBP1Q9NZI7 540 aa4.34□□□□□ -1.71
RPN1-205ENST00000490166 DNAJB4Q9UDY4 337 aa4.34□□□□□ -1.71
RPN1-205ENST00000490166 PRKAG3Q9UGI9 489 aa4.34□□□□□ -1.71
RPN1-205ENST00000490166 STRIP2Q9ULQ0 834 aa4.34□□□□□ -1.71
RPN1-205ENST00000490166 CA14Q9ULX7 337 aa4.34□□□□□ -1.71
RPN1-205ENST00000490166 PCDHA12Q9UN75 941 aa4.34□□□□□ -1.71
RPN1-205ENST00000490166 HES2Q9Y543 173 aa4.34□□□□□ -1.71
RPN1-205ENST00000490166 PCDHB2Q9Y5E7 798 aa4.34□□□□□ -1.71
RPN1-205ENST00000490166 HCFC2Q9Y5Z7 792 aa4.34□□□□□ -1.71
RPN1-205ENST00000490166 KIAA1217Q5T5P2 1943 aa4.33□□□□□ -1.72
RPN1-205ENST00000490166 DOCK5Q9H7D0 1870 aa4.33□□□□□ -1.72
RPN1-205ENST00000490166 STK36Q9NRP7 1315 aa4.33□□□□□ -1.72
RPN1-205ENST00000490166 KDM3AQ9Y4C1 1321 aa4.33□□□□□ -1.72
RPN1-205ENST00000490166 BTBD18B2RXH4 712 aa4.33□□□□□ -1.72
RPN1-205ENST00000490166 C2CD4DB7Z1M9 353 aa4.33□□□□□ -1.72
RPN1-205ENST00000490166 C5orf67F2Z3F1 127 aa4.33□□□□□ -1.72
RPN1-205ENST00000490166 PRRG1O14668 218 aa4.33□□□□□ -1.72
RPN1-205ENST00000490166 B4GALT5O43286 388 aa4.33□□□□□ -1.72
RPN1-205ENST00000490166 PFKFB2O60825 505 aa4.33□□□□□ -1.72
RPN1-205ENST00000490166 CLASP2O75122 1294 aaKnown RBP4.33□□□□□ -1.72
RPN1-205ENST00000490166 MAFO75444 373 aaPredicted RBP4.33□□□□□ -1.72
RPN1-205ENST00000490166 PSMD10O75832 226 aa4.33□□□□□ -1.72
RPN1-205ENST00000490166 ATE1O95260 518 aa4.33□□□□□ -1.72
RPN1-205ENST00000490166 PRKCBP05771 671 aa4.33□□□□□ -1.72
RPN1-205ENST00000490166 RPL17P18621 184 aaKnown RBP4.33□□□□□ -1.72
RPN1-205ENST00000490166 MTHFRP42898 656 aa4.33□□□□□ -1.72
RPN1-205ENST00000490166 GLUD2P49448 558 aa4.33□□□□□ -1.72
RPN1-205ENST00000490166 ADAM17P78536 824 aa4.33□□□□□ -1.72
RPN1-205ENST00000490166 CDC42EP1Q00587 391 aa4.33□□□□□ -1.72
RPN1-205ENST00000490166 STRN3Q13033 797 aa4.33□□□□□ -1.72
RPN1-205ENST00000490166 PRPF4BQ13523 1007 aaKnown RBP4.33□□□□□ -1.72
RPN1-205ENST00000490166 CAPSQ13938 189 aa4.33□□□□□ -1.72
RPN1-205ENST00000490166 EPHA7Q15375 998 aa4.33□□□□□ -1.72
RPN1-205ENST00000490166 SMAD2Q15796 467 aaKnown RBP4.33□□□□□ -1.72
RPN1-205ENST00000490166 PTPN21Q16825 1174 aa4.33□□□□□ -1.72
RPN1-205ENST00000490166 DUSP6Q16828 381 aa4.33□□□□□ -1.72
RPN1-205ENST00000490166 ZNF568Q3ZCX4 644 aa4.33□□□□□ -1.72
RPN1-205ENST00000490166 TTC38Q5R3I4 469 aa4.33□□□□□ -1.72
RPN1-205ENST00000490166 ATAT1Q5SQI0 421 aa4.33□□□□□ -1.72
RPN1-205ENST00000490166 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.33□□□□□ -1.72
RPN1-205ENST00000490166 HDXQ7Z353 690 aa4.33□□□□□ -1.72
RPN1-205ENST00000490166 SLC39A11Q8N1S5 342 aa4.33□□□□□ -1.72
RPN1-205ENST00000490166 DAGLBQ8NCG7 672 aa4.33□□□□□ -1.72
RPN1-205ENST00000490166 FBXO27Q8NI29 283 aa4.33□□□□□ -1.72
RPN1-205ENST00000490166 ING5Q8WYH8 240 aa4.33□□□□□ -1.72
RPN1-205ENST00000490166 SMG7Q92540 1137 aaKnown RBP4.33□□□□□ -1.72
RPN1-205ENST00000490166 STAMQ92783 540 aa4.33□□□□□ -1.72
RPN1-205ENST00000490166 GTF3C6Q969F1 213 aa4.33□□□□□ -1.72
RPN1-205ENST00000490166 ZNF689Q96CS4 500 aaPredicted RBP4.33□□□□□ -1.72
RPN1-205ENST00000490166 FBXL18Q96ME1 805 aa4.33□□□□□ -1.72
RPN1-205ENST00000490166 FAM20AQ96MK3 541 aa4.33□□□□□ -1.72
RPN1-205ENST00000490166 CASD1Q96PB1 797 aa4.33□□□□□ -1.72
RPN1-205ENST00000490166 GAD1Q99259 594 aa4.33□□□□□ -1.72
RPN1-205ENST00000490166 KIFC3Q9BVG8 833 aa4.33□□□□□ -1.72
RPN1-205ENST00000490166 PHF20Q9BVI0 1012 aa4.33□□□□□ -1.72
RPN1-205ENST00000490166 COLEC11Q9BWP8 271 aa4.33□□□□□ -1.72
RPN1-205ENST00000490166 EIF2AQ9BY44 585 aaKnown RBP4.33□□□□□ -1.72
RPN1-205ENST00000490166 ADAMTS10Q9H324 1103 aa4.33□□□□□ -1.72
RPN1-205ENST00000490166 POMKQ9H5K3 350 aa4.33□□□□□ -1.72
RPN1-205ENST00000490166 SFXN1Q9H9B4 322 aa4.33□□□□□ -1.72
RPN1-205ENST00000490166 POLD4Q9HCU8 107 aa4.33□□□□□ -1.72
RPN1-205ENST00000490166 GPRC5CQ9NQ84 441 aa4.33□□□□□ -1.72
RPN1-205ENST00000490166 AGPAT5Q9NUQ2 364 aa4.33□□□□□ -1.72
RPN1-205ENST00000490166 TBC1D13Q9NVG8 400 aa4.33□□□□□ -1.72
RPN1-205ENST00000490166 CACNG4Q9UBN1 327 aa4.33□□□□□ -1.72
RPN1-205ENST00000490166 IPPQ9Y573 584 aa4.33□□□□□ -1.72
RPN1-205ENST00000490166 NUB1Q9Y5A7 615 aa4.33□□□□□ -1.72
RPN1-205ENST00000490166 SQORQ9Y6N5 450 aa4.33□□□□□ -1.72
RPN1-205ENST00000490166 CUL9Q8IWT3 2517 aa4.32□□□□□ -1.72
RPN1-205ENST00000490166 NID2Q14112 1375 aa4.32□□□□□ -1.72
RPN1-205ENST00000490166 SF3B1O75533 1304 aaKnown RBP eCLIP4.32□□□□□ -1.72
RPN1-205ENST00000490166 CNTNAP2Q9UHC6 1331 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms