RNA–Protein interactions for RNA: ENST00000489979.1

VARS-227, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-227ENST00000489979 PROS1P07225 676 aa15.13■□□□□ 0.01
VARS-227ENST00000489979 TAF12Q16514 161 aa15.13■□□□□ 0.01
VARS-227ENST00000489979 PLK5Q496M5 336 aa15.13■□□□□ 0.01
VARS-227ENST00000489979 SPATA1Q5VX52 437 aa15.13■□□□□ 0.01
VARS-227ENST00000489979 PSAPL1Q6NUJ1 521 aa15.13■□□□□ 0.01
VARS-227ENST00000489979 DTHD1Q6ZMT9 781 aa15.13■□□□□ 0.01
VARS-227ENST00000489979 CMTM8Q8IZV2 173 aa15.13■□□□□ 0.01
VARS-227ENST00000489979 CAMKK1Q8N5S9 505 aa15.13■□□□□ 0.01
VARS-227ENST00000489979 FAM212AQ96EL1 285 aa15.13■□□□□ 0.01
VARS-227ENST00000489979 HHIPQ96QV1 700 aa15.13■□□□□ 0.01
VARS-227ENST00000489979 ZCWPW1Q9H0M4 648 aa15.13■□□□□ 0.01
VARS-227ENST00000489979 CCL26Q9Y258 94 aa15.13■□□□□ 0.01
VARS-227ENST00000489979 NPHP3-ACAD11A0A0J9YXS1 232 aa15.12■□□□□ 0.01
VARS-227ENST00000489979 FAM189A1O60320 539 aa15.12■□□□□ 0.01
VARS-227ENST00000489979 LIG4P49917 911 aa15.12■□□□□ 0.01
VARS-227ENST00000489979 KYAT1Q16773 422 aa15.12■□□□□ 0.01
VARS-227ENST00000489979 C9orf57Q5W0N0 161 aa15.12■□□□□ 0.01
VARS-227ENST00000489979 JADE1Q6IE81 842 aa15.12■□□□□ 0.01
VARS-227ENST00000489979 MAB21L3Q8N8X9 362 aa15.12■□□□□ 0.01
VARS-227ENST00000489979 SYT2Q8N9I0 419 aaPredicted RBP15.12■□□□□ 0.01
VARS-227ENST00000489979 USP13Q92995 863 aaPredicted RBP15.12■□□□□ 0.01
VARS-227ENST00000489979 PNMA5Q96PV4 448 aa15.12■□□□□ 0.01
VARS-227ENST00000489979 TSPAN18Q96SJ8 248 aa15.12■□□□□ 0.01
VARS-227ENST00000489979 PLIN2Q99541 437 aa15.12■□□□□ 0.01
VARS-227ENST00000489979 LLPHQ9BRT6 129 aaKnown RBP15.12■□□□□ 0.01
VARS-227ENST00000489979 FBRSL1Q9HCM7 1045 aaKnown RBP15.12■□□□□ 0.01
VARS-227ENST00000489979 TCHHQ07283 1943 aa15.11■□□□□ 0.01
VARS-227ENST00000489979 H0YCG3 227 aa15.11■□□□□ 0.01
VARS-227ENST00000489979 LAD1O00515 517 aa15.11■□□□□ 0.01
VARS-227ENST00000489979 PIRO00625 290 aa15.11■□□□□ 0.01
VARS-227ENST00000489979 HNRNPDLO14979 420 aaKnown RBP15.11■□□□□ 0.01
VARS-227ENST00000489979 DCLK1O15075 740 aa15.11■□□□□ 0.01
VARS-227ENST00000489979 OGTO15294 1046 aa15.11■□□□□ 0.01
VARS-227ENST00000489979 CYP11A1P05108 521 aa15.11■□□□□ 0.01
VARS-227ENST00000489979 ADRB2P07550 413 aa15.11■□□□□ 0.01
VARS-227ENST00000489979 ARSAP15289 507 aa15.11■□□□□ 0.01
VARS-227ENST00000489979 PAX3P23760 479 aa15.11■□□□□ 0.01
VARS-227ENST00000489979 U2AF2P26368 475 aaKnown RBP eCLIP15.11■□□□□ 0.01
VARS-227ENST00000489979 NMT1P30419 496 aaKnown RBP15.11■□□□□ 0.01
VARS-227ENST00000489979 AVPR1AP37288 418 aa15.11■□□□□ 0.01
VARS-227ENST00000489979 PRPHP41219 470 aa15.11■□□□□ 0.01
VARS-227ENST00000489979 GALK1P51570 392 aa15.11■□□□□ 0.01
VARS-227ENST00000489979 SLC12A3P55017 1021 aa15.11■□□□□ 0.01
VARS-227ENST00000489979 NCKAP1LP55160 1127 aa15.11■□□□□ 0.01
VARS-227ENST00000489979 BFSP1Q12934 665 aa15.11■□□□□ 0.01
VARS-227ENST00000489979 HYIQ5T013 277 aa15.11■□□□□ 0.01
VARS-227ENST00000489979 TMEM150AQ86TG1 271 aa15.11■□□□□ 0.01
VARS-227ENST00000489979 FAM184AQ8NB25 1140 aa15.11■□□□□ 0.01
VARS-227ENST00000489979 EDEM2Q9BV94 578 aa15.11■□□□□ 0.01
VARS-227ENST00000489979 DUSP15Q9H1R2 295 aaPredicted RBP15.11■□□□□ 0.01
VARS-227ENST00000489979 ZMYM5Q9UJ78 669 aa15.11■□□□□ 0.01
VARS-227ENST00000489979 LIMCH1Q9UPQ0 1083 aa15.11■□□□□ 0.01
VARS-227ENST00000489979 OBSL1O75147 1896 aa15.11■□□□□ 0.01
VARS-227ENST00000489979 ABCA7Q8IZY2 2146 aa15.11■□□□□ 0.01
VARS-227ENST00000489979 NUP205Q92621 2012 aa15.1■□□□□ 0.01
VARS-227ENST00000489979 ASPMQ8IZT6 3477 aa15.1■□□□□ 0.01
VARS-227ENST00000489979 C1QTNF9BB2RNN3 333 aa15.1■□□□□ 0.01
VARS-227ENST00000489979 CYB561D2O14569 222 aa15.1■□□□□ 0.01
VARS-227ENST00000489979 GIPC1O14908 333 aa15.1■□□□□ 0.01
VARS-227ENST00000489979 NFICP08651 508 aa15.1■□□□□ 0.01
VARS-227ENST00000489979 C1QTNF9P0C862 333 aa15.1■□□□□ 0.01
VARS-227ENST00000489979 PLA2G4BP0C869 781 aa15.1■□□□□ 0.01
VARS-227ENST00000489979 HAPLN1P10915 354 aaPredicted RBP15.1■□□□□ 0.01
VARS-227ENST00000489979 DRD1P21728 446 aa15.1■□□□□ 0.01
VARS-227ENST00000489979 NOVA1P51513 510 aaKnown RBP15.1■□□□□ 0.01
VARS-227ENST00000489979 NLRP12P59046 1061 aa15.1■□□□□ 0.01
VARS-227ENST00000489979 HMGN5P82970 282 aaKnown RBP15.1■□□□□ 0.01
VARS-227ENST00000489979 AMPD2Q01433 879 aa15.1■□□□□ 0.01
VARS-227ENST00000489979 CREB5Q02930 508 aa15.1■□□□□ 0.01
VARS-227ENST00000489979 ELF2Q15723 593 aa15.1■□□□□ 0.01
VARS-227ENST00000489979 NAIF1Q69YI7 327 aaPredicted RBP15.1■□□□□ 0.01
VARS-227ENST00000489979 LRRTM3Q86VH5 581 aa15.1■□□□□ 0.01
VARS-227ENST00000489979 RIN3Q8TB24 985 aa15.1■□□□□ 0.01
VARS-227ENST00000489979 C2orf15Q8WU43 125 aaKnown RBP15.1■□□□□ 0.01
VARS-227ENST00000489979 MSTO1Q9BUK6 570 aa15.1■□□□□ 0.01
VARS-227ENST00000489979 TDP1Q9NUW8 608 aa15.1■□□□□ 0.01
VARS-227ENST00000489979 ABI2Q9NYB9 513 aaPredicted RBP15.1■□□□□ 0.01
VARS-227ENST00000489979 KCND2Q9NZV8 630 aa15.1■□□□□ 0.01
VARS-227ENST00000489979 LARSQ9P2J5 1176 aaKnown RBP15.1■□□□□ 0.01
VARS-227ENST00000489979 DSEQ9UL01 958 aa15.1■□□□□ 0.01
VARS-227ENST00000489979 BAHCC1Q9P281 2608 aa15.1■□□□□ 0.01
VARS-227ENST00000489979 MYO16Q9Y6X6 1858 aa15.1■□□□□ 0.01
VARS-227ENST00000489979 ANO9A1A5B4 782 aa15.09■□□□□ 0.01
VARS-227ENST00000489979 C4orf47A7E2U8 309 aa15.09■□□□□ 0.01
VARS-227ENST00000489979 RHOBTB1O94844 696 aa15.09■□□□□ 0.01
VARS-227ENST00000489979 CAVIN2O95810 425 aa15.09■□□□□ 0.01
VARS-227ENST00000489979 F11P03951 625 aa15.09■□□□□ 0.01
VARS-227ENST00000489979 HMGA1P17096 107 aaKnown RBP15.09■□□□□ 0.01
VARS-227ENST00000489979 DDX6P26196 483 aaKnown RBP eCLIP15.09■□□□□ 0.01
VARS-227ENST00000489979 TMEM132DQ14C87 1099 aa15.09■□□□□ 0.01
VARS-227ENST00000489979 ARSHQ5FYA8 562 aa15.09■□□□□ 0.01
VARS-227ENST00000489979 TXNDC8Q6A555 127 aa15.09■□□□□ 0.01
VARS-227ENST00000489979 CC2D1AQ6P1N0 951 aaPredicted RBP15.09■□□□□ 0.01
VARS-227ENST00000489979 UNQ6494/PRO21346Q6UXR6 183 aa15.09■□□□□ 0.01
VARS-227ENST00000489979 METTL23Q86XA0 190 aa15.09■□□□□ 0.01
VARS-227ENST00000489979 CD302Q8IX05 232 aa15.09■□□□□ 0.01
VARS-227ENST00000489979 THEM5Q8N1Q8 247 aa15.09■□□□□ 0.01
VARS-227ENST00000489979 RPLP0P6Q8NHW5 317 aa15.09■□□□□ 0.01
VARS-227ENST00000489979 SPPL2BQ8TCT7 592 aa15.09■□□□□ 0.01
VARS-227ENST00000489979 KCNN1Q92952 543 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms