RNA–Protein interactions for RNA: ENST00000489927.1

PLOD3-216, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 562 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-216ENST00000489927 ABCD1P33897 745 aa17.15■□□□□ 0.34
PLOD3-216ENST00000489927 TAF6P49848 677 aa17.15■□□□□ 0.34
PLOD3-216ENST00000489927 PLCB2Q00722 1185 aa17.15■□□□□ 0.34
PLOD3-216ENST00000489927 WSCD1Q658N2 575 aa17.15■□□□□ 0.34
PLOD3-216ENST00000489927 METTL23Q86XA0 190 aa17.15■□□□□ 0.34
PLOD3-216ENST00000489927 NETO1Q8TDF5 533 aa17.15■□□□□ 0.34
PLOD3-216ENST00000489927 GCNAQ96QF7 691 aa17.15■□□□□ 0.34
PLOD3-216ENST00000489927 IKZF4Q9H2S9 585 aa17.15■□□□□ 0.34
PLOD3-216ENST00000489927 DPP3Q9NY33 737 aa17.15■□□□□ 0.34
PLOD3-216ENST00000489927 AGO2Q9UKV8 859 aaKnown RBP17.15■□□□□ 0.34
PLOD3-216ENST00000489927 STYXL1Q9Y6J8 313 aa17.15■□□□□ 0.34
PLOD3-216ENST00000489927 SLC30A4O14863 429 aa17.14■□□□□ 0.33
PLOD3-216ENST00000489927 LONP1P36776 959 aaKnown RBP17.14■□□□□ 0.33
PLOD3-216ENST00000489927 MCM2P49736 904 aa17.14■□□□□ 0.33
PLOD3-216ENST00000489927 TAF12Q16514 161 aa17.14■□□□□ 0.33
PLOD3-216ENST00000489927 CSRP2Q16527 193 aa17.14■□□□□ 0.33
PLOD3-216ENST00000489927 ITPRIPL2Q3MIP1 535 aa17.14■□□□□ 0.33
PLOD3-216ENST00000489927 SLFN12LQ6IEE8 588 aa17.14■□□□□ 0.33
PLOD3-216ENST00000489927 PRR23CQ6ZRP0 262 aa17.14■□□□□ 0.33
PLOD3-216ENST00000489927 EFCAB13Q8IY85 973 aa17.14■□□□□ 0.33
PLOD3-216ENST00000489927 CMTM8Q8IZV2 173 aa17.14■□□□□ 0.33
PLOD3-216ENST00000489927 THEM5Q8N1Q8 247 aa17.14■□□□□ 0.33
PLOD3-216ENST00000489927 SYNPOQ8N3V7 929 aa17.14■□□□□ 0.33
PLOD3-216ENST00000489927 SPPL2BQ8TCT7 592 aa17.14■□□□□ 0.33
PLOD3-216ENST00000489927 C2orf15Q8WU43 125 aaKnown RBP17.14■□□□□ 0.33
PLOD3-216ENST00000489927 LARP4BQ92615 738 aaKnown RBP17.14■□□□□ 0.33
PLOD3-216ENST00000489927 CCSER1Q9C0I3 900 aa17.14■□□□□ 0.33
PLOD3-216ENST00000489927 ST6GALNAC4Q9H4F1 302 aa17.14■□□□□ 0.33
PLOD3-216ENST00000489927 THG1LQ9NWX6 298 aaKnown RBP17.14■□□□□ 0.33
PLOD3-216ENST00000489927 ABI2Q9NYB9 513 aaPredicted RBP17.14■□□□□ 0.33
PLOD3-216ENST00000489927 ANK1P16157 1881 aa17.14■□□□□ 0.33
PLOD3-216ENST00000489927 EXTL3O43909 919 aa17.13■□□□□ 0.33
PLOD3-216ENST00000489927 HAPLN1P10915 354 aaPredicted RBP17.13■□□□□ 0.33
PLOD3-216ENST00000489927 HOXA6P31267 233 aa17.13■□□□□ 0.33
PLOD3-216ENST00000489927 SMARCB1Q12824 385 aa17.13■□□□□ 0.33
PLOD3-216ENST00000489927 CRELD2Q6UXH1 353 aaPredicted RBP17.13■□□□□ 0.33
PLOD3-216ENST00000489927 CEP68Q76N32 757 aa17.13■□□□□ 0.33
PLOD3-216ENST00000489927 TMEM150AQ86TG1 271 aa17.13■□□□□ 0.33
PLOD3-216ENST00000489927 FAM160A2Q8N612 972 aaPredicted RBP17.13■□□□□ 0.33
PLOD3-216ENST00000489927 FAM83CQ9BQN1 747 aa17.13■□□□□ 0.33
PLOD3-216ENST00000489927 GKN1Q9NS71 199 aa17.13■□□□□ 0.33
PLOD3-216ENST00000489927 CCL26Q9Y258 94 aa17.13■□□□□ 0.33
PLOD3-216ENST00000489927 SPTBN2O15020 2390 aa17.13■□□□□ 0.33
PLOD3-216ENST00000489927 KPNA7A9QM74 516 aa17.12■□□□□ 0.33
PLOD3-216ENST00000489927 GDF9O60383 454 aa17.12■□□□□ 0.33
PLOD3-216ENST00000489927 BMP15O95972 392 aa17.12■□□□□ 0.33
PLOD3-216ENST00000489927 HMGA1P17096 107 aaKnown RBP17.12■□□□□ 0.33
PLOD3-216ENST00000489927 ADSSP30520 456 aa17.12■□□□□ 0.33
PLOD3-216ENST00000489927 DDIT3P35638 169 aa17.12■□□□□ 0.33
PLOD3-216ENST00000489927 NLRP12P59046 1061 aa17.12■□□□□ 0.33
PLOD3-216ENST00000489927 SF3A1Q15459 793 aaKnown RBP17.12■□□□□ 0.33
PLOD3-216ENST00000489927 LARP1BQ659C4 914 aaKnown RBP17.12■□□□□ 0.33
PLOD3-216ENST00000489927 PKN3Q6P5Z2 889 aa17.12■□□□□ 0.33
PLOD3-216ENST00000489927 ZNF720Q7Z2F6 126 aa17.12■□□□□ 0.33
PLOD3-216ENST00000489927 WDR5BQ86VZ2 330 aa17.12■□□□□ 0.33
PLOD3-216ENST00000489927 MAB21L3Q8N8X9 362 aa17.12■□□□□ 0.33
PLOD3-216ENST00000489927 USP13Q92995 863 aaPredicted RBP17.12■□□□□ 0.33
PLOD3-216ENST00000489927 CHFRQ96EP1 664 aa17.12■□□□□ 0.33
PLOD3-216ENST00000489927 HPS4Q9NQG7 708 aa17.12■□□□□ 0.33
PLOD3-216ENST00000489927 TMLHEQ9NVH6 421 aa17.12■□□□□ 0.33
PLOD3-216ENST00000489927 ZMYM5Q9UJ78 669 aa17.12■□□□□ 0.33
PLOD3-216ENST00000489927 SMC3Q9UQE7 1217 aa17.12■□□□□ 0.33
PLOD3-216ENST00000489927 SCN1AP35498 2009 aa17.12■□□□□ 0.33
PLOD3-216ENST00000489927 OTOL1A6NHN0 477 aaPredicted RBP17.11■□□□□ 0.33
PLOD3-216ENST00000489927 F11P03951 625 aa17.11■□□□□ 0.33
PLOD3-216ENST00000489927 ADRB1P08588 477 aa17.11■□□□□ 0.33
PLOD3-216ENST00000489927 AVPR1AP37288 418 aa17.11■□□□□ 0.33
PLOD3-216ENST00000489927 PXNP49023 591 aaPredicted RBP17.11■□□□□ 0.33
PLOD3-216ENST00000489927 GPR15P49685 360 aa17.11■□□□□ 0.33
PLOD3-216ENST00000489927 POU5F1Q01860 360 aaKnown RBP17.11■□□□□ 0.33
PLOD3-216ENST00000489927 RUNX3Q13761 415 aa17.11■□□□□ 0.33
PLOD3-216ENST00000489927 PTPAQ15257 358 aa17.11■□□□□ 0.33
PLOD3-216ENST00000489927 SV2CQ496J9 727 aa17.11■□□□□ 0.33
PLOD3-216ENST00000489927 TMEM196Q5HYL7 178 aa17.11■□□□□ 0.33
PLOD3-216ENST00000489927 PPM1JQ5JR12 505 aa17.11■□□□□ 0.33
PLOD3-216ENST00000489927 TRIM68Q6AZZ1 485 aa17.11■□□□□ 0.33
PLOD3-216ENST00000489927 USP49Q70CQ1 688 aa17.11■□□□□ 0.33
PLOD3-216ENST00000489927 DYMQ7RTS9 669 aa17.11■□□□□ 0.33
PLOD3-216ENST00000489927 SFR1Q86XK3 245 aa17.11■□□□□ 0.33
PLOD3-216ENST00000489927 DCP1BQ8IZD4 617 aaKnown RBP17.11■□□□□ 0.33
PLOD3-216ENST00000489927 KRI1Q8N9T8 703 aaKnown RBP17.11■□□□□ 0.33
PLOD3-216ENST00000489927 STKLD1Q8NE28 680 aa17.11■□□□□ 0.33
PLOD3-216ENST00000489927 POMGNT1Q8WZA1 660 aa17.11■□□□□ 0.33
PLOD3-216ENST00000489927 EPSTI1Q96J88 318 aa17.11■□□□□ 0.33
PLOD3-216ENST00000489927 EBF3Q9H4W6 596 aa17.11■□□□□ 0.33
PLOD3-216ENST00000489927 PCDHB5Q9Y5E4 795 aa17.11■□□□□ 0.33
PLOD3-216ENST00000489927 ZFHX4Q86UP3 3567 aa17.11■□□□□ 0.33
PLOD3-216ENST00000489927 EPG5Q9HCE0 2579 aa17.11■□□□□ 0.33
PLOD3-216ENST00000489927 KIF26AQ9ULI4 1882 aaPredicted RBP17.1■□□□□ 0.33
PLOD3-216ENST00000489927 PPP1R37O75864 691 aa17.1■□□□□ 0.33
PLOD3-216ENST00000489927 IL18RAPO95256 599 aa17.1■□□□□ 0.33
PLOD3-216ENST00000489927 DDX6P26196 483 aaKnown RBP eCLIP17.1■□□□□ 0.33
PLOD3-216ENST00000489927 WNT7BP56706 349 aa17.1■□□□□ 0.33
PLOD3-216ENST00000489927 KCNA1Q09470 495 aa17.1■□□□□ 0.33
PLOD3-216ENST00000489927 BFSP1Q12934 665 aa17.1■□□□□ 0.33
PLOD3-216ENST00000489927 TXNDC8Q6A555 127 aa17.1■□□□□ 0.33
PLOD3-216ENST00000489927 FSTL4Q6MZW2 842 aa17.1■□□□□ 0.33
PLOD3-216ENST00000489927 BRAPQ7Z569 592 aa17.1■□□□□ 0.33
PLOD3-216ENST00000489927 NT5DC4Q86YG4 428 aa17.1■□□□□ 0.33
PLOD3-216ENST00000489927 RIN3Q8TB24 985 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms