RNA–Protein interactions for RNA: ENST00000489921.1

TNFRSF1B-202, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 3

Gene TNFRSF1B, Length 409 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-202ENST00000489921 SUMF1Q8NBK3 374 aa20.92■□□□□ 0.94
TNFRSF1B-202ENST00000489921 C2orf15Q8WU43 125 aaKnown RBP20.92■□□□□ 0.94
TNFRSF1B-202ENST00000489921 E2F7Q96AV8 911 aa20.92■□□□□ 0.94
TNFRSF1B-202ENST00000489921 TRIM9Q9C026 710 aa20.92■□□□□ 0.94
TNFRSF1B-202ENST00000489921 TNMDQ9H2S6 317 aa20.92■□□□□ 0.94
TNFRSF1B-202ENST00000489921 ATXN3LQ9H3M9 355 aa20.92■□□□□ 0.94
TNFRSF1B-202ENST00000489921 PDE11AQ9HCR9 933 aa20.92■□□□□ 0.94
TNFRSF1B-202ENST00000489921 L1RE1Q9UN81 338 aa20.92■□□□□ 0.94
TNFRSF1B-202ENST00000489921 MRPS17Q9Y2R5 130 aaKnown RBP20.92■□□□□ 0.94
TNFRSF1B-202ENST00000489921 PIAS3Q9Y6X2 628 aa20.92■□□□□ 0.94
TNFRSF1B-202ENST00000489921 PTPRJQ12913 1337 aa20.92■□□□□ 0.94
TNFRSF1B-202ENST00000489921 MAN2B1O00754 1011 aa20.91■□□□□ 0.94
TNFRSF1B-202ENST00000489921 NCAM2O15394 837 aa20.91■□□□□ 0.94
TNFRSF1B-202ENST00000489921 WEE1P30291 646 aa20.91■□□□□ 0.94
TNFRSF1B-202ENST00000489921 PNPLA4P41247 253 aa20.91■□□□□ 0.94
TNFRSF1B-202ENST00000489921 MLLT6P55198 1093 aaPredicted RBP20.91■□□□□ 0.94
TNFRSF1B-202ENST00000489921 CSTF1Q05048 431 aaKnown RBP20.91■□□□□ 0.94
TNFRSF1B-202ENST00000489921 SMARCB1Q12824 385 aa20.91■□□□□ 0.94
TNFRSF1B-202ENST00000489921 MTAPQ13126 283 aa20.91■□□□□ 0.94
TNFRSF1B-202ENST00000489921 MGAT5BQ3V5L5 792 aa20.91■□□□□ 0.94
TNFRSF1B-202ENST00000489921 WDR44Q5JSH3 913 aa20.91■□□□□ 0.94
TNFRSF1B-202ENST00000489921 GPR158Q5T848 1215 aa20.91■□□□□ 0.94
TNFRSF1B-202ENST00000489921 CNNM4Q6P4Q7 775 aa20.91■□□□□ 0.94
TNFRSF1B-202ENST00000489921 GPR179Q6PRD1 2367 aa20.91■□□□□ 0.94
TNFRSF1B-202ENST00000489921 EPM2AIP1Q7L775 607 aaPredicted RBP20.91■□□□□ 0.94
TNFRSF1B-202ENST00000489921 CCDC65Q8IXS2 484 aa20.91■□□□□ 0.94
TNFRSF1B-202ENST00000489921 SPPL2BQ8TCT7 592 aa20.91■□□□□ 0.94
TNFRSF1B-202ENST00000489921 GIPC2Q8TF65 315 aa20.91■□□□□ 0.94
TNFRSF1B-202ENST00000489921 FAM3CQ92520 227 aa20.91■□□□□ 0.94
TNFRSF1B-202ENST00000489921 ZNF560Q96MR9 790 aa20.91■□□□□ 0.94
TNFRSF1B-202ENST00000489921 PKMYT1Q99640 499 aa20.91■□□□□ 0.94
TNFRSF1B-202ENST00000489921 TMEM206Q9H813 350 aa20.91■□□□□ 0.94
TNFRSF1B-202ENST00000489921 PRMT8Q9NR22 394 aaPredicted RBP20.91■□□□□ 0.94
TNFRSF1B-202ENST00000489921 GDAP2Q9NXN4 497 aa20.91■□□□□ 0.94
TNFRSF1B-202ENST00000489921 NDRG2Q9UN36 371 aaKnown RBP20.91■□□□□ 0.94
TNFRSF1B-202ENST00000489921 CHADO15335 359 aa20.9■□□□□ 0.94
TNFRSF1B-202ENST00000489921 PRAMEF12O95522 483 aa20.9■□□□□ 0.94
TNFRSF1B-202ENST00000489921 YEATS4O95619 227 aa20.9■□□□□ 0.94
TNFRSF1B-202ENST00000489921 FGF19O95750 216 aa20.9■□□□□ 0.94
TNFRSF1B-202ENST00000489921 TDGF1P13385 188 aa20.9■□□□□ 0.94
TNFRSF1B-202ENST00000489921 HMGA1P17096 107 aaKnown RBP20.9■□□□□ 0.94
TNFRSF1B-202ENST00000489921 CYP4F8P98187 520 aa20.9■□□□□ 0.94
TNFRSF1B-202ENST00000489921 ZC3H14Q6PJT7 736 aaKnown RBP20.9■□□□□ 0.94
TNFRSF1B-202ENST00000489921 TSSK4Q6SA08 328 aa20.9■□□□□ 0.94
TNFRSF1B-202ENST00000489921 MAMSTRQ6ZN01 415 aa20.9■□□□□ 0.94
TNFRSF1B-202ENST00000489921 OSTM1Q86WC4 334 aa20.9■□□□□ 0.94
TNFRSF1B-202ENST00000489921 GPD1LQ8N335 351 aa20.9■□□□□ 0.94
TNFRSF1B-202ENST00000489921 CSGALNACT2Q8N6G5 542 aa20.9■□□□□ 0.94
TNFRSF1B-202ENST00000489921 LRRC52Q8N7C0 313 aa20.9■□□□□ 0.94
TNFRSF1B-202ENST00000489921 ZBTB44Q8NCP5 570 aa20.9■□□□□ 0.94
TNFRSF1B-202ENST00000489921 KCNG4Q8TDN1 519 aa20.9■□□□□ 0.94
TNFRSF1B-202ENST00000489921 CACTINQ8WUQ7 758 aaKnown RBP20.9■□□□□ 0.94
TNFRSF1B-202ENST00000489921 SLC46A2Q9BY10 475 aa20.9■□□□□ 0.94
TNFRSF1B-202ENST00000489921 CHRDQ9H2X0 955 aa20.9■□□□□ 0.94
TNFRSF1B-202ENST00000489921 ITGA11Q9UKX5 1188 aa20.9■□□□□ 0.94
TNFRSF1B-202ENST00000489921 CHRNB1P11230 501 aa20.89■□□□□ 0.93
TNFRSF1B-202ENST00000489921 GPR15P49685 360 aa20.89■□□□□ 0.93
TNFRSF1B-202ENST00000489921 EHHADHQ08426 723 aa20.89■□□□□ 0.93
TNFRSF1B-202ENST00000489921 CCDC142Q17RM4 750 aa20.89■□□□□ 0.93
TNFRSF1B-202ENST00000489921 LIMS2Q7Z4I7 341 aa20.89■□□□□ 0.93
TNFRSF1B-202ENST00000489921 DCP1BQ8IZD4 617 aaKnown RBP20.89■□□□□ 0.93
TNFRSF1B-202ENST00000489921 OR5B17Q8NGF7 314 aa20.89■□□□□ 0.93
TNFRSF1B-202ENST00000489921 ZFYVE19Q96K21 471 aa20.89■□□□□ 0.93
TNFRSF1B-202ENST00000489921 ZNF396Q96N95 335 aaPredicted RBP20.89■□□□□ 0.93
TNFRSF1B-202ENST00000489921 ACBD6Q9BR61 282 aa20.89■□□□□ 0.93
TNFRSF1B-202ENST00000489921 MTMR12Q9C0I1 747 aa20.89■□□□□ 0.93
TNFRSF1B-202ENST00000489921 TASP1Q9H6P5 420 aa20.89■□□□□ 0.93
TNFRSF1B-202ENST00000489921 OBP2AQ9NY56 170 aa20.89■□□□□ 0.93
TNFRSF1B-202ENST00000489921 ABI2Q9NYB9 513 aaPredicted RBP20.89■□□□□ 0.93
TNFRSF1B-202ENST00000489921 TGFB1I1O43294 461 aa20.88■□□□□ 0.93
TNFRSF1B-202ENST00000489921 HCRTO43612 131 aa20.88■□□□□ 0.93
TNFRSF1B-202ENST00000489921 CUTAO60888 179 aa20.88■□□□□ 0.93
TNFRSF1B-202ENST00000489921 F11P03951 625 aa20.88■□□□□ 0.93
TNFRSF1B-202ENST00000489921 CCNE1P24864 410 aa20.88■□□□□ 0.93
TNFRSF1B-202ENST00000489921 SOX9P48436 509 aa20.88■□□□□ 0.93
TNFRSF1B-202ENST00000489921 GAS6Q14393 721 aa20.88■□□□□ 0.93
TNFRSF1B-202ENST00000489921 FOXD4L5Q5VV16 416 aaPredicted RBP20.88■□□□□ 0.93
TNFRSF1B-202ENST00000489921 LMBRD2Q68DH5 695 aaPredicted RBP20.88■□□□□ 0.93
TNFRSF1B-202ENST00000489921 CBWD2Q8IUF1 395 aa20.88■□□□□ 0.93
TNFRSF1B-202ENST00000489921 STKLD1Q8NE28 680 aa20.88■□□□□ 0.93
TNFRSF1B-202ENST00000489921 ZNF507Q8TCN5 953 aa20.88■□□□□ 0.93
TNFRSF1B-202ENST00000489921 FAM200AQ8TCP9 573 aa20.88■□□□□ 0.93
TNFRSF1B-202ENST00000489921 LEO1Q8WVC0 666 aaPredicted RBP20.88■□□□□ 0.93
TNFRSF1B-202ENST00000489921 FOXD4L4Q8WXT5 416 aaPredicted RBP20.88■□□□□ 0.93
TNFRSF1B-202ENST00000489921 DHX58Q96C10 678 aa20.88■□□□□ 0.93
TNFRSF1B-202ENST00000489921 CUEDC2Q9H467 287 aa20.88■□□□□ 0.93
TNFRSF1B-202ENST00000489921 LMAN1LQ9HAT1 526 aa20.88■□□□□ 0.93
TNFRSF1B-202ENST00000489921 INTS13Q9NVM9 706 aa20.88■□□□□ 0.93
TNFRSF1B-202ENST00000489921 DDX43Q9NXZ2 648 aaKnown RBP20.88■□□□□ 0.93
TNFRSF1B-202ENST00000489921 PCDHB5Q9Y5E4 795 aa20.88■□□□□ 0.93
TNFRSF1B-202ENST00000489921 GREB1Q4ZG55 1949 aa20.88■□□□□ 0.93
TNFRSF1B-202ENST00000489921 ZNF638Q14966 1978 aaKnown RBP20.87■□□□□ 0.93
TNFRSF1B-202ENST00000489921 GABRDO14764 452 aa20.87■□□□□ 0.93
TNFRSF1B-202ENST00000489921 LILRB5O75023 590 aa20.87■□□□□ 0.93
TNFRSF1B-202ENST00000489921 ACAT1P24752 427 aaKnown RBP20.87■□□□□ 0.93
TNFRSF1B-202ENST00000489921 CASP1P29466 404 aa20.87■□□□□ 0.93
TNFRSF1B-202ENST00000489921 RBP5P82980 135 aa20.87■□□□□ 0.93
TNFRSF1B-202ENST00000489921 BFSP1Q12934 665 aa20.87■□□□□ 0.93
TNFRSF1B-202ENST00000489921 VEPH1Q14D04 833 aa20.87■□□□□ 0.93
TNFRSF1B-202ENST00000489921 SOWAHAQ2M3V2 549 aa20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms