RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-206ENST00000489853 CCDC62Q6P9F0 684 aa5.01□□□□□ -1.61
SNRNP40-206ENST00000489853 H2AFVQ71UI9 128 aa5.01□□□□□ -1.61
SNRNP40-206ENST00000489853 ZNF410Q86VK4 478 aa5.01□□□□□ -1.61
SNRNP40-206ENST00000489853 GJD3Q8N144 294 aa5.01□□□□□ -1.61
SNRNP40-206ENST00000489853 MARVELD2Q8N4S9 558 aa5.01□□□□□ -1.61
SNRNP40-206ENST00000489853 FAM172AQ8WUF8 416 aa5.01□□□□□ -1.61
SNRNP40-206ENST00000489853 EME1Q96AY2 570 aa5.01□□□□□ -1.61
SNRNP40-206ENST00000489853 CLIP3Q96DZ5 547 aa5.01□□□□□ -1.61
SNRNP40-206ENST00000489853 SGF29Q96ES7 293 aa5.01□□□□□ -1.61
SNRNP40-206ENST00000489853 TTC1Q99614 292 aa5.01□□□□□ -1.61
SNRNP40-206ENST00000489853 NEURL2Q9BR09 285 aa5.01□□□□□ -1.61
SNRNP40-206ENST00000489853 OSBPL8Q9BZF1 889 aa5.01□□□□□ -1.61
SNRNP40-206ENST00000489853 UNKQ9C0B0 810 aaKnown RBP5.01□□□□□ -1.61
SNRNP40-206ENST00000489853 TGIF2Q9GZN2 237 aa5.01□□□□□ -1.61
SNRNP40-206ENST00000489853 SENP6Q9GZR1 1112 aaPredicted RBP5.01□□□□□ -1.61
SNRNP40-206ENST00000489853 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.01□□□□□ -1.61
SNRNP40-206ENST00000489853 Q9H521 79 aa5.01□□□□□ -1.61
SNRNP40-206ENST00000489853 PIF1Q9H611 641 aa5.01□□□□□ -1.61
SNRNP40-206ENST00000489853 RETREG1Q9H6L5 497 aa5.01□□□□□ -1.61
SNRNP40-206ENST00000489853 LGR6Q9HBX8 967 aa5.01□□□□□ -1.61
SNRNP40-206ENST00000489853 TBC1D23Q9NUY8 699 aa5.01□□□□□ -1.61
SNRNP40-206ENST00000489853 RRN3Q9NYV6 651 aa5.01□□□□□ -1.61
SNRNP40-206ENST00000489853 ANKFY1Q9P2R3 1169 aa5.01□□□□□ -1.61
SNRNP40-206ENST00000489853 NAGPAQ9UK23 515 aa5.01□□□□□ -1.61
SNRNP40-206ENST00000489853 SMG5Q9UPR3 1016 aaKnown RBP5.01□□□□□ -1.61
SNRNP40-206ENST00000489853 LZTS1Q9Y250 596 aa5.01□□□□□ -1.61
SNRNP40-206ENST00000489853 MTO1Q9Y2Z2 717 aaKnown RBP5.01□□□□□ -1.61
SNRNP40-206ENST00000489853 RTCBQ9Y3I0 505 aaKnown RBP5.01□□□□□ -1.61
SNRNP40-206ENST00000489853 PCDHB2Q9Y5E7 798 aa5.01□□□□□ -1.61
SNRNP40-206ENST00000489853 SLC4A4Q9Y6R1 1079 aa5.01□□□□□ -1.61
SNRNP40-206ENST00000489853 SEC23IPQ9Y6Y8 1000 aaKnown RBP5.01□□□□□ -1.61
SNRNP40-206ENST00000489853 MYH4Q9Y623 1939 aa5.01□□□□□ -1.61
SNRNP40-206ENST00000489853 CASZ1Q86V15 1759 aa5.01□□□□□ -1.61
SNRNP40-206ENST00000489853 C1orf167Q5SNV9 1468 aa5.01□□□□□ -1.61
SNRNP40-206ENST00000489853 C15orf38-AP3S2A0A0A6YYH1 394 aa5.01□□□□□ -1.61
SNRNP40-206ENST00000489853 A0A1W2PRG0 241 aa5.01□□□□□ -1.61
SNRNP40-206ENST00000489853 NKRFO15226 690 aaKnown RBP eCLIP5.01□□□□□ -1.61
SNRNP40-206ENST00000489853 ADCY6O43306 1168 aa5.01□□□□□ -1.61
SNRNP40-206ENST00000489853 TIMM44O43615 452 aa5.01□□□□□ -1.61
SNRNP40-206ENST00000489853 CNOT3O75175 753 aaKnown RBP5.01□□□□□ -1.61
SNRNP40-206ENST00000489853 CSDE1O75534 798 aaKnown RBP5.01□□□□□ -1.61
SNRNP40-206ENST00000489853 TM7SF2O76062 418 aa5.01□□□□□ -1.61
SNRNP40-206ENST00000489853 PARNO95453 639 aaKnown RBP5.01□□□□□ -1.61
SNRNP40-206ENST00000489853 ESRRBO95718 433 aa5.01□□□□□ -1.61
SNRNP40-206ENST00000489853 OCM2P0CE71 109 aa5.01□□□□□ -1.61
SNRNP40-206ENST00000489853 OCMP0CE72 109 aaPredicted RBP5.01□□□□□ -1.61
SNRNP40-206ENST00000489853 HSPA8P11142 646 aaKnown RBP5.01□□□□□ -1.61
SNRNP40-206ENST00000489853 ITIH2P19823 946 aa5.01□□□□□ -1.61
SNRNP40-206ENST00000489853 CTNNA2P26232 953 aa5.01□□□□□ -1.61
SNRNP40-206ENST00000489853 PCSK6P29122 969 aa5.01□□□□□ -1.61
SNRNP40-206ENST00000489853 CETN2P41208 172 aa5.01□□□□□ -1.61
SNRNP40-206ENST00000489853 CDK9P50750 372 aaKnown RBP5.01□□□□□ -1.61
SNRNP40-206ENST00000489853 CREB5Q02930 508 aa5.01□□□□□ -1.61
SNRNP40-206ENST00000489853 FOLH1Q04609 750 aa5.01□□□□□ -1.61
SNRNP40-206ENST00000489853 CALCOCO2Q13137 446 aa5.01□□□□□ -1.61
SNRNP40-206ENST00000489853 MSLNQ13421 630 aaPredicted RBP5.01□□□□□ -1.61
SNRNP40-206ENST00000489853 RAPGEF1Q13905 1077 aa5.01□□□□□ -1.61
SNRNP40-206ENST00000489853 RASGRF1Q13972 1273 aa5.01□□□□□ -1.61
SNRNP40-206ENST00000489853 SEPT6Q14141 434 aa5.01□□□□□ -1.61
SNRNP40-206ENST00000489853 KRT81Q14533 505 aa5.01□□□□□ -1.61
SNRNP40-206ENST00000489853 STAT4Q14765 748 aa5.01□□□□□ -1.61
SNRNP40-206ENST00000489853 USP41Q3LFD5 358 aa5.01□□□□□ -1.61
SNRNP40-206ENST00000489853 SFT2D3Q587I9 215 aa5.01□□□□□ -1.61
SNRNP40-206ENST00000489853 UBAP2Q5T6F2 1119 aaKnown RBP5.01□□□□□ -1.61
SNRNP40-206ENST00000489853 PPP1R26Q5T8A7 1209 aaPredicted RBP5.01□□□□□ -1.61
SNRNP40-206ENST00000489853 METTL21CQ5VZV1 264 aa5.01□□□□□ -1.61
SNRNP40-206ENST00000489853 FAAH2Q6GMR7 532 aa5.01□□□□□ -1.61
SNRNP40-206ENST00000489853 TMEM214Q6NUQ4 689 aaKnown RBP5.01□□□□□ -1.61
SNRNP40-206ENST00000489853 RWDD4Q6NW29 188 aaKnown RBP5.01□□□□□ -1.61
SNRNP40-206ENST00000489853 KYAT3Q6YP21 454 aaKnown RBP5.01□□□□□ -1.61
SNRNP40-206ENST00000489853 DTHD1Q6ZMT9 781 aa5.01□□□□□ -1.61
SNRNP40-206ENST00000489853 DCDC5Q6ZRR9 648 aa5.01□□□□□ -1.61
SNRNP40-206ENST00000489853 RIPOR1Q6ZS17 1223 aa5.01□□□□□ -1.61
SNRNP40-206ENST00000489853 OTOAQ7RTW8 1153 aa5.01□□□□□ -1.61
SNRNP40-206ENST00000489853 IRF2BP2Q7Z5L9 587 aa5.01□□□□□ -1.61
SNRNP40-206ENST00000489853 ARPINQ7Z6K5 226 aa5.01□□□□□ -1.61
SNRNP40-206ENST00000489853 C11orf74Q86VG3 221 aa5.01□□□□□ -1.61
SNRNP40-206ENST00000489853 VPS36Q86VN1 386 aa5.01□□□□□ -1.61
SNRNP40-206ENST00000489853 SRRM1Q8IYB3 904 aaKnown RBP5.01□□□□□ -1.61
SNRNP40-206ENST00000489853 AHI1Q8N157 1196 aa5.01□□□□□ -1.61
SNRNP40-206ENST00000489853 GUF1Q8N442 669 aaKnown RBP5.01□□□□□ -1.61
SNRNP40-206ENST00000489853 TTC39CQ8N584 583 aa5.01□□□□□ -1.61
SNRNP40-206ENST00000489853 METTL25Q8N6Q8 603 aa5.01□□□□□ -1.61
SNRNP40-206ENST00000489853 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.01□□□□□ -1.61
SNRNP40-206ENST00000489853 SKA1Q96BD8 255 aa5.01□□□□□ -1.61
SNRNP40-206ENST00000489853 SHISA4Q96DD7 197 aa5.01□□□□□ -1.61
SNRNP40-206ENST00000489853 CDK5RAP3Q96JB5 506 aa5.01□□□□□ -1.61
SNRNP40-206ENST00000489853 LSM14BQ9BX40 385 aaKnown RBP5.01□□□□□ -1.61
SNRNP40-206ENST00000489853 TRIM9Q9C026 710 aa5.01□□□□□ -1.61
SNRNP40-206ENST00000489853 NDEL1Q9GZM8 345 aa5.01□□□□□ -1.61
SNRNP40-206ENST00000489853 CDC42EP4Q9H3Q1 356 aaKnown RBP5.01□□□□□ -1.61
SNRNP40-206ENST00000489853 GOLPH3Q9H4A6 298 aa5.01□□□□□ -1.61
SNRNP40-206ENST00000489853 ZNF696Q9H7X3 374 aa5.01□□□□□ -1.61
SNRNP40-206ENST00000489853 S100A14Q9HCY8 104 aa5.01□□□□□ -1.61
SNRNP40-206ENST00000489853 SLCO1B3Q9NPD5 702 aa5.01□□□□□ -1.61
SNRNP40-206ENST00000489853 RIC8AQ9NPQ8 531 aa5.01□□□□□ -1.61
SNRNP40-206ENST00000489853 GIN1Q9NXP7 522 aa5.01□□□□□ -1.61
SNRNP40-206ENST00000489853 WHRNQ9P202 907 aa5.01□□□□□ -1.61
SNRNP40-206ENST00000489853 HEY2Q9UBP5 337 aa5.01□□□□□ -1.61
SNRNP40-206ENST00000489853 NENFQ9UMX5 172 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 107.5 ms