RNA–Protein interactions for RNA: ENST00000489430.1

MRPL55-230, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-230ENST00000489430 ELSPBP1Q96BH3 223 aa20.4■□□□□ 0.86
MRPL55-230ENST00000489430 LRRC3Q9BY71 257 aa20.4■□□□□ 0.86
MRPL55-230ENST00000489430 GTPBP4Q9BZE4 634 aaKnown RBP20.4■□□□□ 0.86
MRPL55-230ENST00000489430 TRPV4Q9HBA0 871 aa20.4■□□□□ 0.86
MRPL55-230ENST00000489430 CIZ1Q9ULV3 898 aaPredicted RBP20.4■□□□□ 0.86
MRPL55-230ENST00000489430 PCDHB5Q9Y5E4 795 aa20.4■□□□□ 0.86
MRPL55-230ENST00000489430 PDGFBP01127 241 aaPredicted RBP20.39■□□□□ 0.85
MRPL55-230ENST00000489430 NR3C1P04150 777 aa20.39■□□□□ 0.85
MRPL55-230ENST00000489430 HAPLN1P10915 354 aaPredicted RBP20.39■□□□□ 0.85
MRPL55-230ENST00000489430 CCR2P41597 374 aa20.39■□□□□ 0.85
MRPL55-230ENST00000489430 ENPEPQ07075 957 aa20.39■□□□□ 0.85
MRPL55-230ENST00000489430 MGAT5BQ3V5L5 792 aa20.39■□□□□ 0.85
MRPL55-230ENST00000489430 INTS6LQ5JSJ4 861 aaKnown RBP20.39■□□□□ 0.85
MRPL55-230ENST00000489430 TMC8Q8IU68 726 aa20.39■□□□□ 0.85
MRPL55-230ENST00000489430 PARD3BQ8TEW8 1205 aa20.39■□□□□ 0.85
MRPL55-230ENST00000489430 ING5Q8WYH8 240 aa20.39■□□□□ 0.85
MRPL55-230ENST00000489430 E2F7Q96AV8 911 aa20.39■□□□□ 0.85
MRPL55-230ENST00000489430 FAM122AQ96E09 287 aa20.39■□□□□ 0.85
MRPL55-230ENST00000489430 TCEAL4Q96EI5 215 aa20.39■□□□□ 0.85
MRPL55-230ENST00000489430 MCRS1Q96EZ8 462 aa20.39■□□□□ 0.85
MRPL55-230ENST00000489430 FUBP3Q96I24 572 aaKnown RBP eCLIP20.39■□□□□ 0.85
MRPL55-230ENST00000489430 TIGD1Q96MW7 591 aa20.39■□□□□ 0.85
MRPL55-230ENST00000489430 GZF1Q9H116 711 aaPredicted RBP20.39■□□□□ 0.85
MRPL55-230ENST00000489430 IRF2BPLQ9H1B7 796 aa20.39■□□□□ 0.85
MRPL55-230ENST00000489430 VRTNQ9H8Y1 702 aa20.39■□□□□ 0.85
MRPL55-230ENST00000489430 RMND1Q9NWS8 449 aa20.39■□□□□ 0.85
MRPL55-230ENST00000489430 ZMYM5Q9UJ78 669 aa20.39■□□□□ 0.85
MRPL55-230ENST00000489430 HOOK1Q9UJC3 728 aaKnown RBP20.39■□□□□ 0.85
MRPL55-230ENST00000489430 FRMD4BQ9Y2L6 1034 aa20.39■□□□□ 0.85
MRPL55-230ENST00000489430 ZDBF2Q9HCK1 2354 aa20.38■□□□□ 0.85
MRPL55-230ENST00000489430 IKBKBO14920 756 aa20.38■□□□□ 0.85
MRPL55-230ENST00000489430 MOSPD3O75425 235 aa20.38■□□□□ 0.85
MRPL55-230ENST00000489430 PRR29P0C7W0 189 aa20.38■□□□□ 0.85
MRPL55-230ENST00000489430 MYL4P12829 197 aa20.38■□□□□ 0.85
MRPL55-230ENST00000489430 FAM160A1Q05DH4 1040 aa20.38■□□□□ 0.85
MRPL55-230ENST00000489430 MAPRE1Q15691 268 aaKnown RBP20.38■□□□□ 0.85
MRPL55-230ENST00000489430 CFAP221Q4G0U5 840 aa20.38■□□□□ 0.85
MRPL55-230ENST00000489430 PHLDB3Q6NSJ2 640 aa20.38■□□□□ 0.85
MRPL55-230ENST00000489430 ELOA2Q8IYF1 753 aaPredicted RBP20.38■□□□□ 0.85
MRPL55-230ENST00000489430 HS6ST3Q8IZP7 471 aa20.38■□□□□ 0.85
MRPL55-230ENST00000489430 SIX5Q8N196 739 aa20.38■□□□□ 0.85
MRPL55-230ENST00000489430 ENGASEQ8NFI3 743 aa20.38■□□□□ 0.85
MRPL55-230ENST00000489430 TMC2Q8TDI7 906 aa20.38■□□□□ 0.85
MRPL55-230ENST00000489430 SMARCD2Q92925 531 aa20.38■□□□□ 0.85
MRPL55-230ENST00000489430 SYAP1Q96A49 352 aaPredicted RBP20.38■□□□□ 0.85
MRPL55-230ENST00000489430 ASB16Q96NS5 453 aa20.38■□□□□ 0.85
MRPL55-230ENST00000489430 SEPT5Q99719 369 aaPredicted RBP20.38■□□□□ 0.85
MRPL55-230ENST00000489430 RPP25Q9BUL9 199 aaKnown RBP20.38■□□□□ 0.85
MRPL55-230ENST00000489430 ZFP14Q9HCL3 533 aa20.38■□□□□ 0.85
MRPL55-230ENST00000489430 ZNF318Q5VUA4 2279 aa20.38■□□□□ 0.85
MRPL55-230ENST00000489430 TSC2P49815 1807 aa20.37■□□□□ 0.85
MRPL55-230ENST00000489430 TACC1O75410 805 aa20.37■□□□□ 0.85
MRPL55-230ENST00000489430 CST3P01034 146 aaPredicted RBP20.37■□□□□ 0.85
MRPL55-230ENST00000489430 CFHP08603 1231 aa20.37■□□□□ 0.85
MRPL55-230ENST00000489430 WARSP23381 471 aaKnown RBP20.37■□□□□ 0.85
MRPL55-230ENST00000489430 RPL13P26373 211 aaKnown RBP20.37■□□□□ 0.85
MRPL55-230ENST00000489430 TRPC3Q13507 836 aa20.37■□□□□ 0.85
MRPL55-230ENST00000489430 SNW1Q13573 536 aaKnown RBP20.37■□□□□ 0.85
MRPL55-230ENST00000489430 SCARA3Q6AZY7 606 aa20.37■□□□□ 0.85
MRPL55-230ENST00000489430 TTC9BQ8N6N2 239 aa20.37■□□□□ 0.85
MRPL55-230ENST00000489430 SHKBP1Q8TBC3 707 aa20.37■□□□□ 0.85
MRPL55-230ENST00000489430 GPR152Q8TDT2 470 aa20.37■□□□□ 0.85
MRPL55-230ENST00000489430 ZNF516Q92618 1163 aa20.37■□□□□ 0.85
MRPL55-230ENST00000489430 SHDQ96IW2 340 aa20.37■□□□□ 0.85
MRPL55-230ENST00000489430 FAM84AQ96KN4 292 aa20.37■□□□□ 0.85
MRPL55-230ENST00000489430 CEP295NLQ96MC4 621 aa20.37■□□□□ 0.85
MRPL55-230ENST00000489430 GSDMAQ96QA5 445 aa20.37■□□□□ 0.85
MRPL55-230ENST00000489430 PKMYT1Q99640 499 aa20.37■□□□□ 0.85
MRPL55-230ENST00000489430 ABI2Q9NYB9 513 aaPredicted RBP20.37■□□□□ 0.85
MRPL55-230ENST00000489430 CDH9Q9ULB4 789 aa20.37■□□□□ 0.85
MRPL55-230ENST00000489430 NOTCH4Q99466 2003 aa20.37■□□□□ 0.85
MRPL55-230ENST00000489430 SOBPA7XYQ1 873 aa20.36■□□□□ 0.85
MRPL55-230ENST00000489430 NPR3P17342 541 aa20.36■□□□□ 0.85
MRPL55-230ENST00000489430 ATF6P18850 670 aa20.36■□□□□ 0.85
MRPL55-230ENST00000489430 AOC1P19801 751 aa20.36■□□□□ 0.85
MRPL55-230ENST00000489430 WEE1P30291 646 aa20.36■□□□□ 0.85
MRPL55-230ENST00000489430 CDC25CP30307 473 aa20.36■□□□□ 0.85
MRPL55-230ENST00000489430 VCPP55072 806 aaKnown RBP20.36■□□□□ 0.85
MRPL55-230ENST00000489430 RPL10AP62906 217 aaKnown RBP20.36■□□□□ 0.85
MRPL55-230ENST00000489430 GPC5P78333 572 aa20.36■□□□□ 0.85
MRPL55-230ENST00000489430 COBLL1Q53SF7 1204 aa20.36■□□□□ 0.85
MRPL55-230ENST00000489430 FAM78AQ5JUQ0 283 aa20.36■□□□□ 0.85
MRPL55-230ENST00000489430 FAM171BQ6P995 826 aa20.36■□□□□ 0.85
MRPL55-230ENST00000489430 KBTBD7Q8WVZ9 684 aa20.36■□□□□ 0.85
MRPL55-230ENST00000489430 KXD1Q9BQD3 176 aa20.36■□□□□ 0.85
MRPL55-230ENST00000489430 ARHGEF3Q9NR81 526 aa20.36■□□□□ 0.85
MRPL55-230ENST00000489430 KRBA1A5PL33 1030 aa20.35■□□□□ 0.85
MRPL55-230ENST00000489430 PHACTR2O75167 634 aa20.35■□□□□ 0.85
MRPL55-230ENST00000489430 SMC2O95347 1197 aa20.35■□□□□ 0.85
MRPL55-230ENST00000489430 FCARP24071 287 aa20.35■□□□□ 0.85
MRPL55-230ENST00000489430 PTPN5P54829 565 aa20.35■□□□□ 0.85
MRPL55-230ENST00000489430 TNNC1P63316 161 aa20.35■□□□□ 0.85
MRPL55-230ENST00000489430 PRKCQQ04759 706 aa20.35■□□□□ 0.85
MRPL55-230ENST00000489430 TAF12Q16514 161 aa20.35■□□□□ 0.85
MRPL55-230ENST00000489430 EDRF1Q3B7T1 1238 aa20.35■□□□□ 0.85
MRPL55-230ENST00000489430 WDR72Q3MJ13 1102 aa20.35■□□□□ 0.85
MRPL55-230ENST00000489430 IER5LQ5T953 404 aa20.35■□□□□ 0.85
MRPL55-230ENST00000489430 CWF19L1Q69YN2 538 aaKnown RBP20.35■□□□□ 0.85
MRPL55-230ENST00000489430 TANGO2Q6ICL3 276 aa20.35■□□□□ 0.85
MRPL55-230ENST00000489430 POTEHQ6S545 545 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms