RNA–Protein interactions for RNA: ENST00000489402.1

SNX17-207, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 743 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-207ENST00000489402 Q6ZS52 159 aa10.12□□□□□ -0.79
SNX17-207ENST00000489402 CEP68Q76N32 757 aa10.12□□□□□ -0.79
SNX17-207ENST00000489402 SYNPOQ8N3V7 929 aa10.12□□□□□ -0.79
SNX17-207ENST00000489402 KRI1Q8N9T8 703 aaKnown RBP10.12□□□□□ -0.79
SNX17-207ENST00000489402 OR10T2Q8NGX3 314 aa10.12□□□□□ -0.79
SNX17-207ENST00000489402 SPPL2BQ8TCT7 592 aa10.12□□□□□ -0.79
SNX17-207ENST00000489402 LARP4BQ92615 738 aaKnown RBP10.12□□□□□ -0.79
SNX17-207ENST00000489402 RAD54LQ92698 747 aa10.12□□□□□ -0.79
SNX17-207ENST00000489402 TMX3Q96JJ7 454 aa10.12□□□□□ -0.79
SNX17-207ENST00000489402 ZFYVE19Q96K21 471 aa10.12□□□□□ -0.79
SNX17-207ENST00000489402 LPIN3Q9BQK8 851 aa10.12□□□□□ -0.79
SNX17-207ENST00000489402 PYM1Q9BRP8 204 aaKnown RBP10.12□□□□□ -0.79
SNX17-207ENST00000489402 ZCWPW1Q9H0M4 648 aa10.12□□□□□ -0.79
SNX17-207ENST00000489402 SEMA4GQ9NTN9 838 aa10.12□□□□□ -0.79
SNX17-207ENST00000489402 BLOC1S4Q9NUP1 217 aa10.12□□□□□ -0.79
SNX17-207ENST00000489402 DPP3Q9NY33 737 aa10.12□□□□□ -0.79
SNX17-207ENST00000489402 AGO2Q9UKV8 859 aaKnown RBP10.12□□□□□ -0.79
SNX17-207ENST00000489402 SMC3Q9UQE7 1217 aa10.12□□□□□ -0.79
SNX17-207ENST00000489402 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.12□□□□□ -0.79
SNX17-207ENST00000489402 RALGAPA1Q6GYQ0 2036 aa10.12□□□□□ -0.79
SNX17-207ENST00000489402 SCN1AP35498 2009 aa10.11□□□□□ -0.79
SNX17-207ENST00000489402 CEP250Q9BV73 2442 aa10.11□□□□□ -0.79
SNX17-207ENST00000489402 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.11□□□□□ -0.79
SNX17-207ENST00000489402 ANKRD63C9JTQ0 380 aa10.11□□□□□ -0.79
SNX17-207ENST00000489402 PRAMEF12O95522 483 aa10.11□□□□□ -0.79
SNX17-207ENST00000489402 ATF6P18850 670 aa10.11□□□□□ -0.79
SNX17-207ENST00000489402 NMT1P30419 496 aaKnown RBP10.11□□□□□ -0.79
SNX17-207ENST00000489402 AVPR1AP37288 418 aa10.11□□□□□ -0.79
SNX17-207ENST00000489402 POU5F1Q01860 360 aaKnown RBP10.11□□□□□ -0.79
SNX17-207ENST00000489402 BFSP1Q12934 665 aa10.11□□□□□ -0.79
SNX17-207ENST00000489402 KARSQ15046 597 aaKnown RBP10.11□□□□□ -0.79
SNX17-207ENST00000489402 CSRP2Q16527 193 aa10.11□□□□□ -0.79
SNX17-207ENST00000489402 ITPRIPL2Q3MIP1 535 aa10.11□□□□□ -0.79
SNX17-207ENST00000489402 SV2CQ496J9 727 aa10.11□□□□□ -0.79
SNX17-207ENST00000489402 TXNDC11Q6PKC3 985 aa10.11□□□□□ -0.79
SNX17-207ENST00000489402 PRR23CQ6ZRP0 262 aa10.11□□□□□ -0.79
SNX17-207ENST00000489402 BRAPQ7Z569 592 aa10.11□□□□□ -0.79
SNX17-207ENST00000489402 NT5DC4Q86YG4 428 aa10.11□□□□□ -0.79
SNX17-207ENST00000489402 DCP1BQ8IZD4 617 aaKnown RBP10.11□□□□□ -0.79
SNX17-207ENST00000489402 CMTM8Q8IZV2 173 aa10.11□□□□□ -0.79
SNX17-207ENST00000489402 ZSWIM2Q8NEG5 633 aa10.11□□□□□ -0.79
SNX17-207ENST00000489402 POMGNT1Q8WZA1 660 aa10.11□□□□□ -0.79
SNX17-207ENST00000489402 HVCN1Q96D96 273 aa10.11□□□□□ -0.79
SNX17-207ENST00000489402 ZNF560Q96MR9 790 aa10.11□□□□□ -0.79
SNX17-207ENST00000489402 FIZ1Q96SL8 496 aa10.11□□□□□ -0.79
SNX17-207ENST00000489402 ABI2Q9NYB9 513 aaPredicted RBP10.11□□□□□ -0.79
SNX17-207ENST00000489402 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.11□□□□□ -0.79
SNX17-207ENST00000489402 ZNF638Q14966 1978 aaKnown RBP10.11□□□□□ -0.79
SNX17-207ENST00000489402 DENND4CQ5VZ89 1909 aa10.1□□□□□ -0.79
SNX17-207ENST00000489402 KPNA7A9QM74 516 aa10.1□□□□□ -0.79
SNX17-207ENST00000489402 K7ESF4 209 aa10.1□□□□□ -0.79
SNX17-207ENST00000489402 TULP1O00294 542 aaPredicted RBP10.1□□□□□ -0.79
SNX17-207ENST00000489402 SLC30A4O14863 429 aa10.1□□□□□ -0.79
SNX17-207ENST00000489402 HRO43593 1189 aa10.1□□□□□ -0.79
SNX17-207ENST00000489402 IL18RAPO95256 599 aa10.1□□□□□ -0.79
SNX17-207ENST00000489402 HAPLN1P10915 354 aaPredicted RBP10.1□□□□□ -0.79
SNX17-207ENST00000489402 DDX6P26196 483 aaKnown RBP eCLIP10.1□□□□□ -0.79
SNX17-207ENST00000489402 HOXA6P31267 233 aa10.1□□□□□ -0.79
SNX17-207ENST00000489402 PNPLA4P41247 253 aa10.1□□□□□ -0.79
SNX17-207ENST00000489402 WNT7BP56706 349 aa10.1□□□□□ -0.79
SNX17-207ENST00000489402 AMPD2Q01433 879 aa10.1□□□□□ -0.79
SNX17-207ENST00000489402 TSPY1Q01534 308 aa10.1□□□□□ -0.79
SNX17-207ENST00000489402 TNK2Q07912 1038 aa10.1□□□□□ -0.79
SNX17-207ENST00000489402 GRSF1Q12849 480 aaKnown RBP eCLIP10.1□□□□□ -0.79
SNX17-207ENST00000489402 SRSF5Q13243 272 aaKnown RBP10.1□□□□□ -0.79
SNX17-207ENST00000489402 CCINQ13939 588 aa10.1□□□□□ -0.79
SNX17-207ENST00000489402 POSTNQ15063 836 aa10.1□□□□□ -0.79
SNX17-207ENST00000489402 ZC2HC1CQ53FD0 456 aaPredicted RBP10.1□□□□□ -0.79
SNX17-207ENST00000489402 WSCD1Q658N2 575 aa10.1□□□□□ -0.79
SNX17-207ENST00000489402 LARP1BQ659C4 914 aaKnown RBP10.1□□□□□ -0.79
SNX17-207ENST00000489402 USP49Q70CQ1 688 aa10.1□□□□□ -0.79
SNX17-207ENST00000489402 WDR5BQ86VZ2 330 aa10.1□□□□□ -0.79
SNX17-207ENST00000489402 STKLD1Q8NE28 680 aa10.1□□□□□ -0.79
SNX17-207ENST00000489402 GIPC2Q8TF65 315 aa10.1□□□□□ -0.79
SNX17-207ENST00000489402 EXOC4Q96A65 974 aa10.1□□□□□ -0.79
SNX17-207ENST00000489402 CNTNAP3BQ96NU0 1288 aa10.1□□□□□ -0.79
SNX17-207ENST00000489402 CNTNAP3Q9BZ76 1288 aa10.1□□□□□ -0.79
SNX17-207ENST00000489402 CCSER1Q9C0I3 900 aa10.1□□□□□ -0.79
SNX17-207ENST00000489402 SMG9Q9H0W8 520 aaKnown RBP10.1□□□□□ -0.79
SNX17-207ENST00000489402 ST6GALNAC4Q9H4F1 302 aa10.1□□□□□ -0.79
SNX17-207ENST00000489402 KIF9Q9HAQ2 790 aa10.1□□□□□ -0.79
SNX17-207ENST00000489402 UPF2Q9HAU5 1272 aaKnown RBP10.1□□□□□ -0.79
SNX17-207ENST00000489402 IL21Q9HBE4 155 aa10.1□□□□□ -0.79
SNX17-207ENST00000489402 POLR3BQ9NW08 1133 aaPredicted RBP10.1□□□□□ -0.79
SNX17-207ENST00000489402 CCDC39Q9UFE4 941 aa10.1□□□□□ -0.79
SNX17-207ENST00000489402 EXOC7Q9UPT5 735 aa10.1□□□□□ -0.79
SNX17-207ENST00000489402 PCDHB5Q9Y5E4 795 aa10.1□□□□□ -0.79
SNX17-207ENST00000489402 STYXL1Q9Y6J8 313 aa10.1□□□□□ -0.79
SNX17-207ENST00000489402 NCOR2Q9Y618 2525 aa10.09□□□□□ -0.79
SNX17-207ENST00000489402 OBSL1O75147 1896 aa10.09□□□□□ -0.79
SNX17-207ENST00000489402 ATG13O75143 517 aa10.09□□□□□ -0.79
SNX17-207ENST00000489402 PRPF40AO75400 957 aaKnown RBP10.09□□□□□ -0.79
SNX17-207ENST00000489402 CSH1P0DML2 217 aa10.09□□□□□ -0.79
SNX17-207ENST00000489402 CSH2P0DML3 217 aa10.09□□□□□ -0.79
SNX17-207ENST00000489402 DDIT3P35638 169 aa10.09□□□□□ -0.79
SNX17-207ENST00000489402 RUNX3Q13761 415 aa10.09□□□□□ -0.79
SNX17-207ENST00000489402 SF3A1Q15459 793 aaKnown RBP10.09□□□□□ -0.79
SNX17-207ENST00000489402 NFE2Q16621 373 aaPredicted RBP10.09□□□□□ -0.79
SNX17-207ENST00000489402 PPM1JQ5JR12 505 aa10.09□□□□□ -0.79
SNX17-207ENST00000489402 CC2D1AQ6P1N0 951 aaPredicted RBP10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms