RNA–Protein interactions for RNA: ENST00000489230.1

COL4A5-206, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 5

Gene COL4A5, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-206ENST00000489230 FAM81BQ96LP2 452 aa13.32□□□□□ -0.28
COL4A5-206ENST00000489230 TUBGCP2Q9BSJ2 902 aa13.32□□□□□ -0.28
COL4A5-206ENST00000489230 DNAJC25Q9H1X3 360 aa13.32□□□□□ -0.28
COL4A5-206ENST00000489230 DDX43Q9NXZ2 648 aaKnown RBP13.32□□□□□ -0.28
COL4A5-206ENST00000489230 AFF4Q9UHB7 1163 aaKnown RBP13.32□□□□□ -0.28
COL4A5-206ENST00000489230 L1RE1Q9UN81 338 aa13.32□□□□□ -0.28
COL4A5-206ENST00000489230 ANK1P16157 1881 aa13.31□□□□□ -0.28
COL4A5-206ENST00000489230 GTPBP10A4D1E9 387 aaKnown RBP13.31□□□□□ -0.28
COL4A5-206ENST00000489230 KCNJ18B7U540 433 aa13.31□□□□□ -0.28
COL4A5-206ENST00000489230 HNRNPA1P09651 372 aaKnown RBP eCLIP13.31□□□□□ -0.28
COL4A5-206ENST00000489230 CPB1P15086 417 aa13.31□□□□□ -0.28
COL4A5-206ENST00000489230 RPL17P18621 184 aaKnown RBP13.31□□□□□ -0.28
COL4A5-206ENST00000489230 GTF2F1P35269 517 aaKnown RBP eCLIP13.31□□□□□ -0.28
COL4A5-206ENST00000489230 TUFMP49411 452 aaKnown RBP13.31□□□□□ -0.28
COL4A5-206ENST00000489230 MRE11P49959 708 aa13.31□□□□□ -0.28
COL4A5-206ENST00000489230 ARPP19P56211 112 aa13.31□□□□□ -0.28
COL4A5-206ENST00000489230 YWHAEP62258 255 aaKnown RBP13.31□□□□□ -0.28
COL4A5-206ENST00000489230 KCNJ12Q14500 433 aa13.31□□□□□ -0.28
COL4A5-206ENST00000489230 MAN2A1Q16706 1144 aa13.31□□□□□ -0.28
COL4A5-206ENST00000489230 CBWD6Q4V339 395 aa13.31□□□□□ -0.28
COL4A5-206ENST00000489230 TCP11X2Q5H9J9 407 aa13.31□□□□□ -0.28
COL4A5-206ENST00000489230 CBWD3Q5JTY5 395 aa13.31□□□□□ -0.28
COL4A5-206ENST00000489230 CBWD5Q5RIA9 395 aa13.31□□□□□ -0.28
COL4A5-206ENST00000489230 LIN9Q5TKA1 542 aa13.31□□□□□ -0.28
COL4A5-206ENST00000489230 CES5AQ6NT32 575 aa13.31□□□□□ -0.28
COL4A5-206ENST00000489230 ANKRD54Q6NXT1 300 aa13.31□□□□□ -0.28
COL4A5-206ENST00000489230 LLGL2Q6P1M3 1020 aa13.31□□□□□ -0.28
COL4A5-206ENST00000489230 UNC93AQ86WB7 457 aa13.31□□□□□ -0.28
COL4A5-206ENST00000489230 TMEM130Q8N3G9 435 aa13.31□□□□□ -0.28
COL4A5-206ENST00000489230 OR6B3Q8NGW1 331 aa13.31□□□□□ -0.28
COL4A5-206ENST00000489230 FAM84AQ96KN4 292 aa13.31□□□□□ -0.28
COL4A5-206ENST00000489230 ANP32EQ9BTT0 268 aa13.31□□□□□ -0.28
COL4A5-206ENST00000489230 FANCLQ9NW38 375 aa13.31□□□□□ -0.28
COL4A5-206ENST00000489230 ZDHHC7Q9NXF8 308 aa13.31□□□□□ -0.28
COL4A5-206ENST00000489230 CDH9Q9ULB4 789 aa13.31□□□□□ -0.28
COL4A5-206ENST00000489230 LRRC10BA6NIK2 292 aa13.3□□□□□ -0.28
COL4A5-206ENST00000489230 EPCAMP16422 314 aa13.3□□□□□ -0.28
COL4A5-206ENST00000489230 TBXAS1P24557 533 aaPredicted RBP13.3□□□□□ -0.28
COL4A5-206ENST00000489230 NOP14P78316 857 aaKnown RBP13.3□□□□□ -0.28
COL4A5-206ENST00000489230 ROR1Q01973 937 aa13.3□□□□□ -0.28
COL4A5-206ENST00000489230 VWA3BQ502W6 1294 aa13.3□□□□□ -0.28
COL4A5-206ENST00000489230 ATAT1Q5SQI0 421 aa13.3□□□□□ -0.28
COL4A5-206ENST00000489230 RSPO2Q6UXX9 243 aaPredicted RBP13.3□□□□□ -0.28
COL4A5-206ENST00000489230 GBP6Q6ZN66 633 aa13.3□□□□□ -0.28
COL4A5-206ENST00000489230 C11orf57Q6ZUT1 292 aaPredicted RBP13.3□□□□□ -0.28
COL4A5-206ENST00000489230 GLYCTKQ8IVS8 523 aa13.3□□□□□ -0.28
COL4A5-206ENST00000489230 TCEAL8Q8IYN2 117 aa13.3□□□□□ -0.28
COL4A5-206ENST00000489230 CMASQ8NFW8 434 aaPredicted RBP13.3□□□□□ -0.28
COL4A5-206ENST00000489230 TNIP3Q96KP6 325 aa13.3□□□□□ -0.28
COL4A5-206ENST00000489230 FUCA2Q9BTY2 467 aa13.3□□□□□ -0.28
COL4A5-206ENST00000489230 RHOBTB2Q9BYZ6 727 aa13.3□□□□□ -0.28
COL4A5-206ENST00000489230 NIF3L1Q9GZT8 377 aa13.3□□□□□ -0.28
COL4A5-206ENST00000489230 ZCWPW1Q9H0M4 648 aa13.3□□□□□ -0.28
COL4A5-206ENST00000489230 KCNH6Q9H252 994 aa13.3□□□□□ -0.28
COL4A5-206ENST00000489230 NDST4Q9H3R1 872 aa13.3□□□□□ -0.28
COL4A5-206ENST00000489230 SFXN1Q9H9B4 322 aa13.3□□□□□ -0.28
COL4A5-206ENST00000489230 MAN1C1Q9NR34 630 aa13.3□□□□□ -0.28
COL4A5-206ENST00000489230 SAMSN1Q9NSI8 373 aaKnown RBP13.3□□□□□ -0.28
COL4A5-206ENST00000489230 PRKAG3Q9UGI9 489 aa13.3□□□□□ -0.28
COL4A5-206ENST00000489230 CD207Q9UJ71 328 aa13.3□□□□□ -0.28
COL4A5-206ENST00000489230 A8MXQ7 604 aa13.29□□□□□ -0.28
COL4A5-206ENST00000489230 PRRG1O14668 218 aa13.29□□□□□ -0.28
COL4A5-206ENST00000489230 LINC01565O15544 149 aa13.29□□□□□ -0.28
COL4A5-206ENST00000489230 ADAM12O43184 909 aa13.29□□□□□ -0.28
COL4A5-206ENST00000489230 XYLBO75191 536 aa13.29□□□□□ -0.28
COL4A5-206ENST00000489230 ZMYND10O75800 440 aa13.29□□□□□ -0.28
COL4A5-206ENST00000489230 SPATA31D3P0C874 917 aa13.29□□□□□ -0.28
COL4A5-206ENST00000489230 HOXA9P31269 272 aa13.29□□□□□ -0.28
COL4A5-206ENST00000489230 LTBRP36941 435 aa13.29□□□□□ -0.28
COL4A5-206ENST00000489230 NHLH1Q02575 133 aa13.29□□□□□ -0.28
COL4A5-206ENST00000489230 PLD1Q13393 1074 aa13.29□□□□□ -0.28
COL4A5-206ENST00000489230 PPM1LQ5SGD2 360 aa13.29□□□□□ -0.28
COL4A5-206ENST00000489230 CDKAL1Q5VV42 579 aa13.29□□□□□ -0.28
COL4A5-206ENST00000489230 SCARA3Q6AZY7 606 aa13.29□□□□□ -0.28
COL4A5-206ENST00000489230 C4orf50Q6ZRC1 276 aa13.29□□□□□ -0.28
COL4A5-206ENST00000489230 SPATA31D4Q6ZUB0 917 aa13.29□□□□□ -0.28
COL4A5-206ENST00000489230 SPPL2BQ8TCT7 592 aa13.29□□□□□ -0.28
COL4A5-206ENST00000489230 SEMA4DQ92854 862 aa13.29□□□□□ -0.28
COL4A5-206ENST00000489230 JAKMIP2Q96AA8 810 aa13.29□□□□□ -0.28
COL4A5-206ENST00000489230 MSLNLQ96KJ4 702 aa13.29□□□□□ -0.28
COL4A5-206ENST00000489230 NECTIN4Q96NY8 510 aa13.29□□□□□ -0.28
COL4A5-206ENST00000489230 NT5C1BQ96P26 610 aa13.29□□□□□ -0.28
COL4A5-206ENST00000489230 BCO2Q9BYV7 579 aa13.29□□□□□ -0.28
COL4A5-206ENST00000489230 ADAM7Q9H2U9 754 aa13.29□□□□□ -0.28
COL4A5-206ENST00000489230 CYP4F11Q9HBI6 524 aa13.29□□□□□ -0.28
COL4A5-206ENST00000489230 CLEC1BQ9P126 229 aa13.29□□□□□ -0.28
COL4A5-206ENST00000489230 FBXW11Q9UKB1 542 aa13.29□□□□□ -0.28
COL4A5-206ENST00000489230 MYO7AQ13402 2215 aa13.29□□□□□ -0.28
COL4A5-206ENST00000489230 CCDC195A0A1B0GUA6 201 aa13.28□□□□□ -0.28
COL4A5-206ENST00000489230 WDR27A2RRH5 827 aa13.28□□□□□ -0.28
COL4A5-206ENST00000489230 PAPLNO95428 1278 aa13.28□□□□□ -0.28
COL4A5-206ENST00000489230 POU2F2P09086 479 aa13.28□□□□□ -0.28
COL4A5-206ENST00000489230 PDGFRBP09619 1106 aa13.28□□□□□ -0.28
COL4A5-206ENST00000489230 MTHFRP42898 656 aa13.28□□□□□ -0.28
COL4A5-206ENST00000489230 ALDH1A3P47895 512 aa13.28□□□□□ -0.28
COL4A5-206ENST00000489230 ZP2Q05996 745 aa13.28□□□□□ -0.28
COL4A5-206ENST00000489230 ADCY1Q08828 1119 aa13.28□□□□□ -0.28
COL4A5-206ENST00000489230 EXOC3L4Q17RC7 722 aa13.28□□□□□ -0.28
COL4A5-206ENST00000489230 SLC39A12Q504Y0 691 aa13.28□□□□□ -0.28
COL4A5-206ENST00000489230 INTS6LQ5JSJ4 861 aaKnown RBP13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms