RNA–Protein interactions for RNA: ENST00000489045.5

COL9A3-213, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-213ENST00000489045 OBSL1O75147 1896 aa24.75■■□□□ 1.55
COL9A3-213ENST00000489045 GFRA3O60609 400 aa24.75■■□□□ 1.55
COL9A3-213ENST00000489045 HUS1O60921 280 aa24.75■■□□□ 1.55
COL9A3-213ENST00000489045 GLULP15104 373 aa24.75■■□□□ 1.55
COL9A3-213ENST00000489045 CD72P21854 359 aa24.75■■□□□ 1.55
COL9A3-213ENST00000489045 RBP5P82980 135 aa24.75■■□□□ 1.55
COL9A3-213ENST00000489045 CUL4BQ13620 913 aa24.75■■□□□ 1.55
COL9A3-213ENST00000489045 UBXN2BQ14CS0 331 aa24.75■■□□□ 1.55
COL9A3-213ENST00000489045 STXBP5Q5T5C0 1151 aa24.75■■□□□ 1.55
COL9A3-213ENST00000489045 GAREM2Q75VX8 874 aa24.75■■□□□ 1.55
COL9A3-213ENST00000489045 GRAMD1CQ8IYS0 662 aa24.75■■□□□ 1.55
COL9A3-213ENST00000489045 OR5B17Q8NGF7 314 aa24.75■■□□□ 1.55
COL9A3-213ENST00000489045 SCFD1Q8WVM8 642 aa24.75■■□□□ 1.55
COL9A3-213ENST00000489045 DNASE1L2Q92874 299 aa24.75■■□□□ 1.55
COL9A3-213ENST00000489045 TRMT61BQ9BVS5 477 aaKnown RBP24.75■■□□□ 1.55
COL9A3-213ENST00000489045 BRD9Q9H8M2 597 aa24.75■■□□□ 1.55
COL9A3-213ENST00000489045 HEBP1Q9NRV9 189 aa24.75■■□□□ 1.55
COL9A3-213ENST00000489045 ABI2Q9NYB9 513 aaPredicted RBP24.75■■□□□ 1.55
COL9A3-213ENST00000489045 NCANO14594 1321 aa24.75■■□□□ 1.55
COL9A3-213ENST00000489045 TNNC2P02585 160 aa24.74■■□□□ 1.55
COL9A3-213ENST00000489045 HAPLN1P10915 354 aaPredicted RBP24.74■■□□□ 1.55
COL9A3-213ENST00000489045 PSMC3P17980 439 aa24.74■■□□□ 1.55
COL9A3-213ENST00000489045 GABRR2P28476 465 aa24.74■■□□□ 1.55
COL9A3-213ENST00000489045 TSPY1Q01534 308 aa24.74■■□□□ 1.55
COL9A3-213ENST00000489045 VEPH1Q14D04 833 aa24.74■■□□□ 1.55
COL9A3-213ENST00000489045 SURF1Q15526 300 aa24.74■■□□□ 1.55
COL9A3-213ENST00000489045 FRMD5Q7Z6J6 570 aa24.74■■□□□ 1.55
COL9A3-213ENST00000489045 CEP57L1Q8IYX8 460 aa24.74■■□□□ 1.55
COL9A3-213ENST00000489045 ATXN3LQ9H3M9 355 aa24.74■■□□□ 1.55
COL9A3-213ENST00000489045 KIAA1586Q9HCI6 787 aa24.74■■□□□ 1.55
COL9A3-213ENST00000489045 SLC39A2Q9NP94 309 aa24.74■■□□□ 1.55
COL9A3-213ENST00000489045 LTB4R2Q9NPC1 389 aa24.74■■□□□ 1.55
COL9A3-213ENST00000489045 TMLHEQ9NVH6 421 aa24.74■■□□□ 1.55
COL9A3-213ENST00000489045 GDAP2Q9NXN4 497 aa24.74■■□□□ 1.55
COL9A3-213ENST00000489045 DDX43Q9NXZ2 648 aaKnown RBP24.74■■□□□ 1.55
COL9A3-213ENST00000489045 SERTAD1Q9UHV2 236 aa24.74■■□□□ 1.55
COL9A3-213ENST00000489045 MTF2Q9Y483 593 aaPredicted RBP24.74■■□□□ 1.55
COL9A3-213ENST00000489045 SNX9Q9Y5X1 595 aa24.74■■□□□ 1.55
COL9A3-213ENST00000489045 CACNA1IQ9P0X4 2223 aa24.73■■□□□ 1.55
COL9A3-213ENST00000489045 PVALEFA0A1B0GWK0 134 aa24.73■■□□□ 1.55
COL9A3-213ENST00000489045 CLIC2O15247 247 aa24.73■■□□□ 1.55
COL9A3-213ENST00000489045 FGF19O95750 216 aa24.73■■□□□ 1.55
COL9A3-213ENST00000489045 GDI1P31150 447 aa24.73■■□□□ 1.55
COL9A3-213ENST00000489045 TMEM86AQ8N2M4 240 aa24.73■■□□□ 1.55
COL9A3-213ENST00000489045 RDH13Q8NBN7 331 aa24.73■■□□□ 1.55
COL9A3-213ENST00000489045 GIPC2Q8TF65 315 aa24.73■■□□□ 1.55
COL9A3-213ENST00000489045 DEPDC1BQ8WUY9 529 aa24.73■■□□□ 1.55
COL9A3-213ENST00000489045 PCDHB5Q9Y5E4 795 aa24.73■■□□□ 1.55
COL9A3-213ENST00000489045 DMDP11532 3685 aa24.73■■□□□ 1.55
COL9A3-213ENST00000489045 VPS13AQ96RL7 3174 aa24.73■■□□□ 1.55
COL9A3-213ENST00000489045 HEPACAM2A8MVW5 462 aa24.72■■□□□ 1.55
COL9A3-213ENST00000489045 ACTN4O43707 911 aaKnown RBP24.72■■□□□ 1.55
COL9A3-213ENST00000489045 ACAT1P24752 427 aaKnown RBP24.72■■□□□ 1.55
COL9A3-213ENST00000489045 CYP2J2P51589 502 aa24.72■■□□□ 1.55
COL9A3-213ENST00000489045 MYL7Q01449 175 aa24.72■■□□□ 1.55
COL9A3-213ENST00000489045 SNRNP35Q16560 246 aaKnown RBP24.72■■□□□ 1.55
COL9A3-213ENST00000489045 DUOXA2Q1HG44 320 aa24.72■■□□□ 1.55
COL9A3-213ENST00000489045 BMT2Q1RMZ1 405 aa24.72■■□□□ 1.55
COL9A3-213ENST00000489045 OSTM1Q86WC4 334 aa24.72■■□□□ 1.55
COL9A3-213ENST00000489045 WDR49Q8IV35 697 aa24.72■■□□□ 1.55
COL9A3-213ENST00000489045 ADGRF2Q8IZF7 708 aa24.72■■□□□ 1.55
COL9A3-213ENST00000489045 LEO1Q8WVC0 666 aaPredicted RBP24.72■■□□□ 1.55
COL9A3-213ENST00000489045 IRF7Q92985 503 aa24.72■■□□□ 1.55
COL9A3-213ENST00000489045 RSPRY1Q96DX4 576 aa24.72■■□□□ 1.55
COL9A3-213ENST00000489045 CHAMP1Q96JM3 812 aa24.72■■□□□ 1.55
COL9A3-213ENST00000489045 ACBD6Q9BR61 282 aa24.72■■□□□ 1.55
COL9A3-213ENST00000489045 MKNK1Q9BUB5 465 aa24.72■■□□□ 1.55
COL9A3-213ENST00000489045 ZDHHC9Q9Y397 364 aa24.72■■□□□ 1.55
COL9A3-213ENST00000489045 R3HCC1Q9Y3T6 440 aaKnown RBP24.72■■□□□ 1.55
COL9A3-213ENST00000489045 ZNF638Q14966 1978 aaKnown RBP24.71■■□□□ 1.55
COL9A3-213ENST00000489045 FAM170BA6NMN3 283 aa24.71■■□□□ 1.55
COL9A3-213ENST00000489045 SLFN14P0C7P3 912 aa24.71■■□□□ 1.55
COL9A3-213ENST00000489045 MYO1EQ12965 1108 aa24.71■■□□□ 1.55
COL9A3-213ENST00000489045 NFE2Q16621 373 aaPredicted RBP24.71■■□□□ 1.55
COL9A3-213ENST00000489045 GPR158Q5T848 1215 aa24.71■■□□□ 1.55
COL9A3-213ENST00000489045 HS2ST1Q7LGA3 356 aa24.71■■□□□ 1.55
COL9A3-213ENST00000489045 MFSD6LQ8IWD5 586 aa24.71■■□□□ 1.55
COL9A3-213ENST00000489045 TOP6BLQ8N6T0 577 aa24.71■■□□□ 1.55
COL9A3-213ENST00000489045 E2F7Q96AV8 911 aa24.71■■□□□ 1.55
COL9A3-213ENST00000489045 HPDLQ96IR7 371 aa24.71■■□□□ 1.55
COL9A3-213ENST00000489045 PI4K2AQ9BTU6 479 aa24.71■■□□□ 1.55
COL9A3-213ENST00000489045 OSBPL6Q9BZF3 934 aa24.71■■□□□ 1.55
COL9A3-213ENST00000489045 FANCMQ8IYD8 2048 aa24.71■■□□□ 1.55
COL9A3-213ENST00000489045 PFKFB1P16118 471 aa24.7■■□□□ 1.54
COL9A3-213ENST00000489045 TARSP26639 723 aaKnown RBP24.7■■□□□ 1.54
COL9A3-213ENST00000489045 SNRPFP62306 86 aaKnown RBP24.7■■□□□ 1.54
COL9A3-213ENST00000489045 KRT85P78386 507 aa24.7■■□□□ 1.54
COL9A3-213ENST00000489045 CYP4F8P98187 520 aa24.7■■□□□ 1.54
COL9A3-213ENST00000489045 TAF12Q16514 161 aa24.7■■□□□ 1.54
COL9A3-213ENST00000489045 SOWAHAQ2M3V2 549 aa24.7■■□□□ 1.54
COL9A3-213ENST00000489045 ARHGAP15Q53QZ3 475 aa24.7■■□□□ 1.54
COL9A3-213ENST00000489045 INTS6LQ5JSJ4 861 aaKnown RBP24.7■■□□□ 1.54
COL9A3-213ENST00000489045 ZNF852Q6ZMS4 543 aa24.7■■□□□ 1.54
COL9A3-213ENST00000489045 ASCL5Q7RTU5 278 aa24.7■■□□□ 1.54
COL9A3-213ENST00000489045 GPIHBP1Q8IV16 184 aa24.7■■□□□ 1.54
COL9A3-213ENST00000489045 C1orf210Q8IVY1 113 aa24.7■■□□□ 1.54
COL9A3-213ENST00000489045 XXYLT1Q8NBI6 393 aa24.7■■□□□ 1.54
COL9A3-213ENST00000489045 SPATA18Q8TC71 538 aa24.7■■□□□ 1.54
COL9A3-213ENST00000489045 SPATA32Q96LK8 384 aa24.7■■□□□ 1.54
COL9A3-213ENST00000489045 BCO2Q9BYV7 579 aa24.7■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms