RNA–Protein interactions for RNA: ENST00000488908.1

CCDC93-209, Transcript of coiled-coil domain containing 93, humanhuman

TSL 5

Gene CCDC93, Length 268 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-209ENST00000488908 PNLDC1Q8NA58 520 aaKnown RBP3.77□□□□□ -1.81
CCDC93-209ENST00000488908 SCAMP4Q969E2 229 aa3.77□□□□□ -1.81
CCDC93-209ENST00000488908 C5orf34Q96MH7 638 aa3.77□□□□□ -1.81
CCDC93-209ENST00000488908 ASB2Q96Q27 587 aa3.77□□□□□ -1.81
CCDC93-209ENST00000488908 SLC2A13Q96QE2 648 aa3.77□□□□□ -1.81
CCDC93-209ENST00000488908 VKORC1Q9BQB6 163 aa3.77□□□□□ -1.81
CCDC93-209ENST00000488908 TRNAU1APQ9NX07 287 aaKnown RBP3.77□□□□□ -1.81
CCDC93-209ENST00000488908 SGTAO43765 313 aa3.76□□□□□ -1.81
CCDC93-209ENST00000488908 ITGALP20701 1170 aa3.76□□□□□ -1.81
CCDC93-209ENST00000488908 AGXTP21549 392 aa3.76□□□□□ -1.81
CCDC93-209ENST00000488908 LPOP22079 712 aaPredicted RBP3.76□□□□□ -1.81
CCDC93-209ENST00000488908 CD6P30203 668 aa3.76□□□□□ -1.81
CCDC93-209ENST00000488908 LINC00205P59089 165 aa3.76□□□□□ -1.81
CCDC93-209ENST00000488908 ZNF280AP59817 542 aaPredicted RBP3.76□□□□□ -1.81
CCDC93-209ENST00000488908 RAB39AQ14964 217 aa3.76□□□□□ -1.81
CCDC93-209ENST00000488908 Q4G0T1 1027 aa3.76□□□□□ -1.81
CCDC93-209ENST00000488908 GADL1Q6ZQY3 521 aa3.76□□□□□ -1.81
CCDC93-209ENST00000488908 STRA8Q7Z7C7 330 aa3.76□□□□□ -1.81
CCDC93-209ENST00000488908 CHSY1Q86X52 802 aa3.76□□□□□ -1.81
CCDC93-209ENST00000488908 C8orf58Q8NAV2 365 aa3.76□□□□□ -1.81
CCDC93-209ENST00000488908 PIGOQ8TEQ8 1089 aa3.76□□□□□ -1.81
CCDC93-209ENST00000488908 MARK4Q96L34 752 aa3.76□□□□□ -1.81
CCDC93-209ENST00000488908 VPS33BQ9H267 617 aa3.76□□□□□ -1.81
CCDC93-209ENST00000488908 SMOC2Q9H3U7 446 aa3.76□□□□□ -1.81
CCDC93-209ENST00000488908 PDGFCQ9NRA1 345 aa3.76□□□□□ -1.81
CCDC93-209ENST00000488908 ZNF277Q9NRM2 450 aaPredicted RBP3.76□□□□□ -1.81
CCDC93-209ENST00000488908 ZBTB32Q9Y2Y4 487 aaPredicted RBP3.76□□□□□ -1.81
CCDC93-209ENST00000488908 MRPL42Q9Y6G3 142 aaKnown RBP3.76□□□□□ -1.81
CCDC93-209ENST00000488908 WDR17Q8IZU2 1322 aa3.75□□□□□ -1.81
CCDC93-209ENST00000488908 E5RJQ4 531 aa3.75□□□□□ -1.81
CCDC93-209ENST00000488908 BCAR3O75815 825 aa3.75□□□□□ -1.81
CCDC93-209ENST00000488908 FGBP02675 491 aa3.75□□□□□ -1.81
CCDC93-209ENST00000488908 SCP2P22307 547 aa3.75□□□□□ -1.81
CCDC93-209ENST00000488908 CYP2C18P33260 490 aa3.75□□□□□ -1.81
CCDC93-209ENST00000488908 TMPRSS15P98073 1019 aa3.75□□□□□ -1.81
CCDC93-209ENST00000488908 HOXA4Q00056 320 aaPredicted RBP3.75□□□□□ -1.81
CCDC93-209ENST00000488908 PCID2Q5JVF3 399 aa3.75□□□□□ -1.81
CCDC93-209ENST00000488908 TAF2Q6P1X5 1199 aa3.75□□□□□ -1.81
CCDC93-209ENST00000488908 MEPCEQ7L2J0 689 aaKnown RBP3.75□□□□□ -1.81
CCDC93-209ENST00000488908 IRF2BP2Q7Z5L9 587 aa3.75□□□□□ -1.81
CCDC93-209ENST00000488908 PDSS2Q86YH6 399 aa3.75□□□□□ -1.81
CCDC93-209ENST00000488908 PPM1NQ8N819 430 aa3.75□□□□□ -1.81
CCDC93-209ENST00000488908 PSD4Q8NDX1 1056 aa3.75□□□□□ -1.81
CCDC93-209ENST00000488908 HDAC10Q969S8 669 aa3.75□□□□□ -1.81
CCDC93-209ENST00000488908 ETAA1Q9NY74 926 aa3.75□□□□□ -1.81
CCDC93-209ENST00000488908 PCDHA13Q9Y5I0 950 aa3.75□□□□□ -1.81
CCDC93-209ENST00000488908 FAM90A10PA6NDY2 464 aa3.74□□□□□ -1.81
CCDC93-209ENST00000488908 CHEK2O96017 543 aa3.74□□□□□ -1.81
CCDC93-209ENST00000488908 GTF2H3Q13889 308 aa3.74□□□□□ -1.81
CCDC93-209ENST00000488908 TWIST1Q15672 202 aa3.74□□□□□ -1.81
CCDC93-209ENST00000488908 NPM2Q86SE8 214 aaKnown RBP3.74□□□□□ -1.81
CCDC93-209ENST00000488908 FAM109AQ8N4B1 249 aa3.74□□□□□ -1.81
CCDC93-209ENST00000488908 UBR7Q8N806 425 aa3.74□□□□□ -1.81
CCDC93-209ENST00000488908 NRACQ8N912 160 aa3.74□□□□□ -1.81
CCDC93-209ENST00000488908 UBXN4Q92575 508 aa3.74□□□□□ -1.81
CCDC93-209ENST00000488908 CNPPD1Q9BV87 410 aa3.74□□□□□ -1.81
CCDC93-209ENST00000488908 DLL3Q9NYJ7 618 aa3.74□□□□□ -1.81
CCDC93-209ENST00000488908 CALCOCO1Q9P1Z2 691 aa3.74□□□□□ -1.81
CCDC93-209ENST00000488908 ZNF112Q9UJU3 913 aa3.74□□□□□ -1.81
CCDC93-209ENST00000488908 WASHC2AQ641Q2 1341 aa3.73□□□□□ -1.81
CCDC93-209ENST00000488908 FNDC1Q4ZHG4 1894 aaPredicted RBP3.73□□□□□ -1.81
CCDC93-209ENST00000488908 PPM1DO15297 605 aa3.73□□□□□ -1.81
CCDC93-209ENST00000488908 TLR5O60602 858 aa3.73□□□□□ -1.81
CCDC93-209ENST00000488908 GNAI3P08754 354 aa3.73□□□□□ -1.81
CCDC93-209ENST00000488908 TMEM191BP0C7N4 346 aa3.73□□□□□ -1.81
CCDC93-209ENST00000488908 SOX5P35711 763 aa3.73□□□□□ -1.81
CCDC93-209ENST00000488908 GNAI1P63096 354 aa3.73□□□□□ -1.81
CCDC93-209ENST00000488908 CYP4F2P78329 520 aa3.73□□□□□ -1.81
CCDC93-209ENST00000488908 TLE1Q04724 770 aa3.73□□□□□ -1.81
CCDC93-209ENST00000488908 STAT4Q14765 748 aa3.73□□□□□ -1.81
CCDC93-209ENST00000488908 CERKLQ49MI3 558 aaPredicted RBP3.73□□□□□ -1.81
CCDC93-209ENST00000488908 CCDC93Q567U6 631 aa3.73□□□□□ -1.81
CCDC93-209ENST00000488908 VPS53Q5VIR6 699 aa3.73□□□□□ -1.81
CCDC93-209ENST00000488908 SHC4Q6S5L8 630 aa3.73□□□□□ -1.81
CCDC93-209ENST00000488908 DLK2Q6UY11 383 aa3.73□□□□□ -1.81
CCDC93-209ENST00000488908 NAPRTQ6XQN6 538 aa3.73□□□□□ -1.81
CCDC93-209ENST00000488908 DTX2Q86UW9 622 aa3.73□□□□□ -1.81
CCDC93-209ENST00000488908 AMOTL1Q8IY63 956 aa3.73□□□□□ -1.81
CCDC93-209ENST00000488908 CYP2W1Q8TAV3 490 aa3.73□□□□□ -1.81
CCDC93-209ENST00000488908 MRGPRX4Q96LA9 322 aa3.73□□□□□ -1.81
CCDC93-209ENST00000488908 NELL2Q99435 816 aa3.73□□□□□ -1.81
CCDC93-209ENST00000488908 SIK2Q9H0K1 926 aa3.73□□□□□ -1.81
CCDC93-209ENST00000488908 CAAP1Q9H8G2 361 aa3.73□□□□□ -1.81
CCDC93-209ENST00000488908 BRD9Q9H8M2 597 aa3.73□□□□□ -1.81
CCDC93-209ENST00000488908 SERHLQ9NQF3 203 aa3.73□□□□□ -1.81
CCDC93-209ENST00000488908 DUSP22Q9NRW4 184 aa3.73□□□□□ -1.81
CCDC93-209ENST00000488908 RLIMQ9NVW2 624 aa3.73□□□□□ -1.81
CCDC93-209ENST00000488908 NIPSNAP3AQ9UFN0 247 aaPredicted RBP3.73□□□□□ -1.81
CCDC93-209ENST00000488908 SH2B3Q9UQQ2 575 aa3.73□□□□□ -1.81
CCDC93-209ENST00000488908 ZNF785A8K8V0 405 aa3.72□□□□□ -1.81
CCDC93-209ENST00000488908 SLC16A3O15427 465 aaKnown RBP3.72□□□□□ -1.81
CCDC93-209ENST00000488908 PRKD3O94806 890 aa3.72□□□□□ -1.81
CCDC93-209ENST00000488908 OAZ2O95190 189 aa3.72□□□□□ -1.81
CCDC93-209ENST00000488908 PDHA1P08559 390 aa3.72□□□□□ -1.81
CCDC93-209ENST00000488908 ENGP17813 658 aa3.72□□□□□ -1.81
CCDC93-209ENST00000488908 SLC16A1P53985 500 aa3.72□□□□□ -1.81
CCDC93-209ENST00000488908 PSMC1P62191 440 aaKnown RBP3.72□□□□□ -1.81
CCDC93-209ENST00000488908 HABP2Q14520 560 aaPredicted RBP3.72□□□□□ -1.81
CCDC93-209ENST00000488908 TRIM72Q6ZMU5 477 aa3.72□□□□□ -1.81
CCDC93-209ENST00000488908 C16orf52Q8NHV5 167 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms