RNA–Protein interactions for RNA: ENST00000488733.1

ATP1A1-208, Transcript of ATPase Na+/K+ transporting subunit alpha 1, humanhuman

TSL 2

Gene ATP1A1, Length 1,728 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1A1-208ENST00000488733 C1orf131Q8NDD1 294 aaKnown RBP21.38■■□□□ 1.01
ATP1A1-208ENST00000488733 C18orf25Q96B23 403 aaPredicted RBP21.38■■□□□ 1.01
ATP1A1-208ENST00000488733 ZNF560Q96MR9 790 aa21.38■■□□□ 1.01
ATP1A1-208ENST00000488733 NT5C1AQ9BXI3 368 aa21.38■■□□□ 1.01
ATP1A1-208ENST00000488733 CRISPLD2Q9H0B8 497 aa21.38■■□□□ 1.01
ATP1A1-208ENST00000488733 RNF39Q9H2S5 420 aa21.38■■□□□ 1.01
ATP1A1-208ENST00000488733 STRIP2Q9ULQ0 834 aa21.38■■□□□ 1.01
ATP1A1-208ENST00000488733 GTF3C5Q9Y5Q8 519 aaPredicted RBP21.38■■□□□ 1.01
ATP1A1-208ENST00000488733 TRIP11Q15643 1979 aa21.38■■□□□ 1.01
ATP1A1-208ENST00000488733 PDCD11Q14690 1871 aaKnown RBP21.38■■□□□ 1.01
ATP1A1-208ENST00000488733 PIRO00625 290 aa21.38■■□□□ 1.01
ATP1A1-208ENST00000488733 ATP8B1O43520 1251 aa21.38■■□□□ 1.01
ATP1A1-208ENST00000488733 PEX5P50542 639 aa21.38■■□□□ 1.01
ATP1A1-208ENST00000488733 CDK7P50613 346 aa21.38■■□□□ 1.01
ATP1A1-208ENST00000488733 RNASE9P60153 205 aaKnown RBP21.38■■□□□ 1.01
ATP1A1-208ENST00000488733 NFX1Q12986 1120 aaKnown RBP21.38■■□□□ 1.01
ATP1A1-208ENST00000488733 STILQ15468 1287 aa21.38■■□□□ 1.01
ATP1A1-208ENST00000488733 SGO2Q562F6 1265 aa21.38■■□□□ 1.01
ATP1A1-208ENST00000488733 GLRA4Q5JXX5 417 aa21.38■■□□□ 1.01
ATP1A1-208ENST00000488733 C8orf74Q6P047 294 aa21.38■■□□□ 1.01
ATP1A1-208ENST00000488733 WDTC1Q8N5D0 677 aa21.38■■□□□ 1.01
ATP1A1-208ENST00000488733 BTBD6Q96KE9 485 aa21.38■■□□□ 1.01
ATP1A1-208ENST00000488733 LRRC1Q9BTT6 524 aa21.38■■□□□ 1.01
ATP1A1-208ENST00000488733 KLK14Q9P0G3 267 aa21.38■■□□□ 1.01
ATP1A1-208ENST00000488733 NDST1P52848 882 aa21.37■■□□□ 1.01
ATP1A1-208ENST00000488733 VSNL1P62760 191 aa21.37■■□□□ 1.01
ATP1A1-208ENST00000488733 FAM26DQ5JW98 314 aa21.37■■□□□ 1.01
ATP1A1-208ENST00000488733 FBXO47Q5MNV8 452 aa21.37■■□□□ 1.01
ATP1A1-208ENST00000488733 FEZF2Q8TBJ5 459 aa21.37■■□□□ 1.01
ATP1A1-208ENST00000488733 ALG3Q92685 438 aa21.37■■□□□ 1.01
ATP1A1-208ENST00000488733 RNPC3Q96LT9 517 aaKnown RBP21.37■■□□□ 1.01
ATP1A1-208ENST00000488733 HEXIM2Q96MH2 286 aaKnown RBP21.37■■□□□ 1.01
ATP1A1-208ENST00000488733 TWNKQ96RR1 684 aa21.37■■□□□ 1.01
ATP1A1-208ENST00000488733 PLVAPQ9BX97 442 aa21.37■■□□□ 1.01
ATP1A1-208ENST00000488733 DNAI2Q9GZS0 605 aa21.37■■□□□ 1.01
ATP1A1-208ENST00000488733 FAM105AQ9NUU6 356 aa21.37■■□□□ 1.01
ATP1A1-208ENST00000488733 RNF216Q9NWF9 866 aaPredicted RBP21.37■■□□□ 1.01
ATP1A1-208ENST00000488733 SNX9Q9Y5X1 595 aa21.37■■□□□ 1.01
ATP1A1-208ENST00000488733 PROSCO94903 275 aa21.36■■□□□ 1.01
ATP1A1-208ENST00000488733 PPP2R5EQ16537 467 aa21.36■■□□□ 1.01
ATP1A1-208ENST00000488733 ZNF618Q5T7W0 954 aa21.36■■□□□ 1.01
ATP1A1-208ENST00000488733 DCAF12L1Q5VU92 463 aa21.36■■□□□ 1.01
ATP1A1-208ENST00000488733 DENND1BQ6P3S1 775 aa21.36■■□□□ 1.01
ATP1A1-208ENST00000488733 UNC93AQ86WB7 457 aa21.36■■□□□ 1.01
ATP1A1-208ENST00000488733 GADD45GIP1Q8TAE8 222 aaPredicted RBP21.36■■□□□ 1.01
ATP1A1-208ENST00000488733 SQORQ9Y6N5 450 aa21.36■■□□□ 1.01
ATP1A1-208ENST00000488733 KRIT1O00522 736 aa21.35■■□□□ 1.01
ATP1A1-208ENST00000488733 ZRANB2O95218 330 aaKnown RBP eCLIP21.35■■□□□ 1.01
ATP1A1-208ENST00000488733 CKBP12277 381 aa21.35■■□□□ 1.01
ATP1A1-208ENST00000488733 RWDD2BP57060 319 aa21.35■■□□□ 1.01
ATP1A1-208ENST00000488733 MAP9Q49MG5 647 aa21.35■■□□□ 1.01
ATP1A1-208ENST00000488733 C2CD6Q53TS8 623 aa21.35■■□□□ 1.01
ATP1A1-208ENST00000488733 FAM126BQ8IXS8 530 aa21.35■■□□□ 1.01
ATP1A1-208ENST00000488733 SLC38A7Q9NVC3 462 aa21.35■■□□□ 1.01
ATP1A1-208ENST00000488733 ZNF446Q9NWS9 450 aa21.35■■□□□ 1.01
ATP1A1-208ENST00000488733 GDAP2Q9NXN4 497 aa21.35■■□□□ 1.01
ATP1A1-208ENST00000488733 WDR35Q9P2L0 1181 aa21.35■■□□□ 1.01
ATP1A1-208ENST00000488733 HMGXB4Q9UGU5 601 aa21.35■■□□□ 1.01
ATP1A1-208ENST00000488733 IP6K2Q9UHH9 426 aa21.35■■□□□ 1.01
ATP1A1-208ENST00000488733 WDR3Q9UNX4 943 aaKnown RBP eCLIP21.35■■□□□ 1.01
ATP1A1-208ENST00000488733 SBDSQ9Y3A5 250 aaKnown RBP eCLIP21.35■■□□□ 1.01
ATP1A1-208ENST00000488733 PPEF2O14830 753 aa21.35■■□□□ 1.01
ATP1A1-208ENST00000488733 FGGP02679 453 aa21.35■■□□□ 1.01
ATP1A1-208ENST00000488733 GHRP10912 638 aa21.35■■□□□ 1.01
ATP1A1-208ENST00000488733 ITGA4P13612 1032 aa21.35■■□□□ 1.01
ATP1A1-208ENST00000488733 MAN1A1P33908 653 aa21.35■■□□□ 1.01
ATP1A1-208ENST00000488733 LONRF2Q1L5Z9 754 aa21.35■■□□□ 1.01
ATP1A1-208ENST00000488733 SV2CQ496J9 727 aa21.35■■□□□ 1.01
ATP1A1-208ENST00000488733 SEL1L2Q5TEA6 688 aa21.35■■□□□ 1.01
ATP1A1-208ENST00000488733 KRT35Q92764 455 aa21.35■■□□□ 1.01
ATP1A1-208ENST00000488733 KRT12Q99456 494 aa21.35■■□□□ 1.01
ATP1A1-208ENST00000488733 TRAIPQ9BWF2 469 aa21.35■■□□□ 1.01
ATP1A1-208ENST00000488733 AGO3Q9H9G7 860 aaKnown RBP21.35■■□□□ 1.01
ATP1A1-208ENST00000488733 ERVK-5Q9HDB9 667 aa21.35■■□□□ 1.01
ATP1A1-208ENST00000488733 KPNA7A9QM74 516 aa21.34■■□□□ 1.01
ATP1A1-208ENST00000488733 O00370 1275 aa21.34■■□□□ 1.01
ATP1A1-208ENST00000488733 MICAL2O94851 1124 aa21.34■■□□□ 1.01
ATP1A1-208ENST00000488733 LRPAP1P30533 357 aa21.34■■□□□ 1.01
ATP1A1-208ENST00000488733 TAF6P49848 677 aa21.34■■□□□ 1.01
ATP1A1-208ENST00000488733 MNX1P50219 401 aaPredicted RBP21.34■■□□□ 1.01
ATP1A1-208ENST00000488733 RAB27AP51159 221 aa21.34■■□□□ 1.01
ATP1A1-208ENST00000488733 PAK2Q13177 524 aa21.34■■□□□ 1.01
ATP1A1-208ENST00000488733 LPIN1Q14693 890 aa21.34■■□□□ 1.01
ATP1A1-208ENST00000488733 DNAJC24Q6P3W2 148 aa21.34■■□□□ 1.01
ATP1A1-208ENST00000488733 PHLDB2Q86SQ0 1253 aa21.34■■□□□ 1.01
ATP1A1-208ENST00000488733 C3orf20Q8ND61 904 aa21.34■■□□□ 1.01
ATP1A1-208ENST00000488733 STIM2Q9P246 746 aa21.34■■□□□ 1.01
ATP1A1-208ENST00000488733 GOLGA6L10A0A0M3HER8 536 aa21.33■■□□□ 1.01
ATP1A1-208ENST00000488733 TCRBV5S1A1TA0A578 114 aa21.33■■□□□ 1.01
ATP1A1-208ENST00000488733 TMEM191CA6NGB0 347 aa21.33■■□□□ 1.01
ATP1A1-208ENST00000488733 CD52P31358 61 aa21.33■■□□□ 1.01
ATP1A1-208ENST00000488733 GSCP56915 257 aaPredicted RBP21.33■■□□□ 1.01
ATP1A1-208ENST00000488733 LCLAT1Q6UWP7 414 aa21.33■■□□□ 1.01
ATP1A1-208ENST00000488733 MRPL10Q7Z7H8 261 aaKnown RBP21.33■■□□□ 1.01
ATP1A1-208ENST00000488733 C18orf8Q96DM3 657 aa21.33■■□□□ 1.01
ATP1A1-208ENST00000488733 PPP1R10Q96QC0 940 aaKnown RBP21.33■■□□□ 1.01
ATP1A1-208ENST00000488733 OSBPL7Q9BZF2 842 aa21.33■■□□□ 1.01
ATP1A1-208ENST00000488733 MIS12Q9H081 205 aa21.33■■□□□ 1.01
ATP1A1-208ENST00000488733 PADI3Q9ULW8 664 aa21.33■■□□□ 1.01
ATP1A1-208ENST00000488733 GIT1Q9Y2X7 761 aa21.33■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms