RNA–Protein interactions for RNA: ENST00000488384.1

ERGIC3-216, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 766 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-216ENST00000488384 PIK3CAP42336 1068 aa17.15■□□□□ 0.34
ERGIC3-216ENST00000488384 LHX1P48742 406 aa17.15■□□□□ 0.34
ERGIC3-216ENST00000488384 CDR1P51861 262 aa17.15■□□□□ 0.34
ERGIC3-216ENST00000488384 STX17P56962 302 aa17.15■□□□□ 0.34
ERGIC3-216ENST00000488384 NTHL1P78549 312 aa17.15■□□□□ 0.34
ERGIC3-216ENST00000488384 MYL7Q01449 175 aa17.15■□□□□ 0.34
ERGIC3-216ENST00000488384 TSPY1Q01534 308 aa17.15■□□□□ 0.34
ERGIC3-216ENST00000488384 DUSP4Q13115 394 aa17.15■□□□□ 0.34
ERGIC3-216ENST00000488384 INTS6LQ5JSJ4 861 aaKnown RBP17.15■□□□□ 0.34
ERGIC3-216ENST00000488384 GRASPQ7Z6J2 395 aaPredicted RBP17.15■□□□□ 0.34
ERGIC3-216ENST00000488384 TDRD5Q8NAT2 981 aaKnown RBP17.15■□□□□ 0.34
ERGIC3-216ENST00000488384 TAS1R2Q8TE23 839 aa17.15■□□□□ 0.34
ERGIC3-216ENST00000488384 MMS19Q96T76 1030 aa17.15■□□□□ 0.34
ERGIC3-216ENST00000488384 PKMYT1Q99640 499 aa17.15■□□□□ 0.34
ERGIC3-216ENST00000488384 ACBD6Q9BR61 282 aa17.15■□□□□ 0.34
ERGIC3-216ENST00000488384 C1QTNF1Q9BXJ1 281 aa17.15■□□□□ 0.34
ERGIC3-216ENST00000488384 SMYD3Q9H7B4 428 aa17.15■□□□□ 0.34
ERGIC3-216ENST00000488384 MMRN2Q9H8L6 949 aa17.15■□□□□ 0.34
ERGIC3-216ENST00000488384 TMLHEQ9NVH6 421 aa17.15■□□□□ 0.34
ERGIC3-216ENST00000488384 HCFC1R1Q9NWW0 138 aa17.15■□□□□ 0.34
ERGIC3-216ENST00000488384 NXF1Q9UBU9 619 aaKnown RBP17.15■□□□□ 0.34
ERGIC3-216ENST00000488384 USTQ9Y2C2 406 aa17.15■□□□□ 0.34
ERGIC3-216ENST00000488384 NME7Q9Y5B8 376 aa17.15■□□□□ 0.34
ERGIC3-216ENST00000488384 NOTCH4Q99466 2003 aa17.14■□□□□ 0.34
ERGIC3-216ENST00000488384 FAM86C2PA6NEL3 165 aa17.14■□□□□ 0.33
ERGIC3-216ENST00000488384 N4BP1O75113 896 aaKnown RBP17.14■□□□□ 0.33
ERGIC3-216ENST00000488384 TACC1O75410 805 aa17.14■□□□□ 0.33
ERGIC3-216ENST00000488384 ASS1P00966 412 aaKnown RBP17.14■□□□□ 0.33
ERGIC3-216ENST00000488384 PCSK1P29120 753 aa17.14■□□□□ 0.33
ERGIC3-216ENST00000488384 GTF2H1P32780 548 aa17.14■□□□□ 0.33
ERGIC3-216ENST00000488384 MXI1P50539 228 aa17.14■□□□□ 0.33
ERGIC3-216ENST00000488384 TWF1Q12792 350 aa17.14■□□□□ 0.33
ERGIC3-216ENST00000488384 DCAF17Q5H9S7 520 aaPredicted RBP17.14■□□□□ 0.33
ERGIC3-216ENST00000488384 ZNF667Q5HYK9 610 aa17.14■□□□□ 0.33
ERGIC3-216ENST00000488384 DCP1BQ8IZD4 617 aaKnown RBP17.14■□□□□ 0.33
ERGIC3-216ENST00000488384 MED15Q96RN5 788 aa17.14■□□□□ 0.33
ERGIC3-216ENST00000488384 DNMT3BQ9UBC3 853 aaKnown RBP17.14■□□□□ 0.33
ERGIC3-216ENST00000488384 ARMCX3Q9UH62 379 aaPredicted RBP17.14■□□□□ 0.33
ERGIC3-216ENST00000488384 NR2E1Q9Y466 385 aa17.14■□□□□ 0.33
ERGIC3-216ENST00000488384 DOCK8Q8NF50 2099 aa17.14■□□□□ 0.33
ERGIC3-216ENST00000488384 CLSTN1O94985 981 aa17.13■□□□□ 0.33
ERGIC3-216ENST00000488384 MBD3O95983 291 aa17.13■□□□□ 0.33
ERGIC3-216ENST00000488384 LMO2P25791 158 aa17.13■□□□□ 0.33
ERGIC3-216ENST00000488384 SGSM1Q2NKQ1 1148 aa17.13■□□□□ 0.33
ERGIC3-216ENST00000488384 DPCR1Q3MIW9 517 aa17.13■□□□□ 0.33
ERGIC3-216ENST00000488384 KRT39Q6A163 491 aa17.13■□□□□ 0.33
ERGIC3-216ENST00000488384 SPOPLQ6IQ16 392 aa17.13■□□□□ 0.33
ERGIC3-216ENST00000488384 SCARA5Q6ZMJ2 495 aa17.13■□□□□ 0.33
ERGIC3-216ENST00000488384 GET4Q7L5D6 327 aaPredicted RBP17.13■□□□□ 0.33
ERGIC3-216ENST00000488384 FILIP1Q7Z7B0 1213 aa17.13■□□□□ 0.33
ERGIC3-216ENST00000488384 MLKLQ8NB16 471 aa17.13■□□□□ 0.33
ERGIC3-216ENST00000488384 C2orf15Q8WU43 125 aaKnown RBP17.13■□□□□ 0.33
ERGIC3-216ENST00000488384 TAF4BQ92750 862 aa17.13■□□□□ 0.33
ERGIC3-216ENST00000488384 SLC35C1Q96A29 364 aa17.13■□□□□ 0.33
ERGIC3-216ENST00000488384 SYT15Q9BQS2 421 aa17.13■□□□□ 0.33
ERGIC3-216ENST00000488384 PI4K2AQ9BTU6 479 aa17.13■□□□□ 0.33
ERGIC3-216ENST00000488384 CEP72Q9P209 647 aa17.13■□□□□ 0.33
ERGIC3-216ENST00000488384 HSFX1Q9UBD0 423 aa17.13■□□□□ 0.33
ERGIC3-216ENST00000488384 RWDD2AQ9UIY3 292 aa17.13■□□□□ 0.33
ERGIC3-216ENST00000488384 SLC27A5Q9Y2P5 690 aa17.13■□□□□ 0.33
ERGIC3-216ENST00000488384 STX10O60499 249 aa17.12■□□□□ 0.33
ERGIC3-216ENST00000488384 GPR37L1O60883 481 aa17.12■□□□□ 0.33
ERGIC3-216ENST00000488384 LRRN2O75325 713 aa17.12■□□□□ 0.33
ERGIC3-216ENST00000488384 SOAT2O75908 522 aa17.12■□□□□ 0.33
ERGIC3-216ENST00000488384 FAM163BP0C2L3 166 aa17.12■□□□□ 0.33
ERGIC3-216ENST00000488384 ASPAP45381 313 aa17.12■□□□□ 0.33
ERGIC3-216ENST00000488384 RAP1GAPP47736 663 aa17.12■□□□□ 0.33
ERGIC3-216ENST00000488384 PSMC1P62191 440 aaKnown RBP17.12■□□□□ 0.33
ERGIC3-216ENST00000488384 NOP14P78316 857 aaKnown RBP17.12■□□□□ 0.33
ERGIC3-216ENST00000488384 SMARCB1Q12824 385 aa17.12■□□□□ 0.33
ERGIC3-216ENST00000488384 CCDC40Q4G0X9 1142 aa17.12■□□□□ 0.33
ERGIC3-216ENST00000488384 CBWD6Q4V339 395 aa17.12■□□□□ 0.33
ERGIC3-216ENST00000488384 PABPC1LQ4VXU2 614 aaKnown RBP17.12■□□□□ 0.33
ERGIC3-216ENST00000488384 CBWD3Q5JTY5 395 aa17.12■□□□□ 0.33
ERGIC3-216ENST00000488384 CBWD5Q5RIA9 395 aa17.12■□□□□ 0.33
ERGIC3-216ENST00000488384 TCERG1LQ5VWI1 586 aa17.12■□□□□ 0.33
ERGIC3-216ENST00000488384 RBM43Q6ZSC3 357 aaKnown RBP17.12■□□□□ 0.33
ERGIC3-216ENST00000488384 OTOP3Q7RTS5 596 aa17.12■□□□□ 0.33
ERGIC3-216ENST00000488384 FRMD5Q7Z6J6 570 aa17.12■□□□□ 0.33
ERGIC3-216ENST00000488384 RNF135Q8IUD6 432 aa17.12■□□□□ 0.33
ERGIC3-216ENST00000488384 SPPL2BQ8TCT7 592 aa17.12■□□□□ 0.33
ERGIC3-216ENST00000488384 MYADMQ96S97 322 aa17.12■□□□□ 0.33
ERGIC3-216ENST00000488384 SEPT5Q99719 369 aaPredicted RBP17.12■□□□□ 0.33
ERGIC3-216ENST00000488384 SDCBP2Q9H190 292 aa17.12■□□□□ 0.33
ERGIC3-216ENST00000488384 DNAJC25Q9H1X3 360 aa17.12■□□□□ 0.33
ERGIC3-216ENST00000488384 APOBEC3GQ9HC16 384 aaKnown RBP17.12■□□□□ 0.33
ERGIC3-216ENST00000488384 METTL14Q9HCE5 456 aaKnown RBP17.12■□□□□ 0.33
ERGIC3-216ENST00000488384 CRTAC1Q9NQ79 661 aa17.12■□□□□ 0.33
ERGIC3-216ENST00000488384 ABI2Q9NYB9 513 aaPredicted RBP17.12■□□□□ 0.33
ERGIC3-216ENST00000488384 MYBPHLA2RUH7 354 aa17.11■□□□□ 0.33
ERGIC3-216ENST00000488384 ATP2C2O75185 946 aa17.11■□□□□ 0.33
ERGIC3-216ENST00000488384 RHOP08100 348 aa17.11■□□□□ 0.33
ERGIC3-216ENST00000488384 ATF6P18850 670 aa17.11■□□□□ 0.33
ERGIC3-216ENST00000488384 FSHRP23945 695 aa17.11■□□□□ 0.33
ERGIC3-216ENST00000488384 CDH8P55286 799 aa17.11■□□□□ 0.33
ERGIC3-216ENST00000488384 NLRP12P59046 1061 aa17.11■□□□□ 0.33
ERGIC3-216ENST00000488384 PLD1Q13393 1074 aa17.11■□□□□ 0.33
ERGIC3-216ENST00000488384 NFE2Q16621 373 aaPredicted RBP17.11■□□□□ 0.33
ERGIC3-216ENST00000488384 SLC5A9Q2M3M2 681 aa17.11■□□□□ 0.33
ERGIC3-216ENST00000488384 MGAT5BQ3V5L5 792 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms