RNA–Protein interactions for RNA: ENST00000488228.1

UBE4B-210, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-210ENST00000488228 IQCB1Q15051 598 aa11.82□□□□□ -0.52
UBE4B-210ENST00000488228 SLC39A12Q504Y0 691 aa11.82□□□□□ -0.52
UBE4B-210ENST00000488228 INTS6LQ5JSJ4 861 aaKnown RBP11.82□□□□□ -0.52
UBE4B-210ENST00000488228 ANKRD54Q6NXT1 300 aa11.82□□□□□ -0.52
UBE4B-210ENST00000488228 RNF19BQ6ZMZ0 732 aa11.82□□□□□ -0.52
UBE4B-210ENST00000488228 LUZP1Q86V48 1076 aa11.82□□□□□ -0.52
UBE4B-210ENST00000488228 TTC9BQ8N6N2 239 aa11.82□□□□□ -0.52
UBE4B-210ENST00000488228 C12orf76Q8N812 135 aaPredicted RBP11.82□□□□□ -0.52
UBE4B-210ENST00000488228 KREMEN2Q8NCW0 462 aa11.82□□□□□ -0.52
UBE4B-210ENST00000488228 CASP10Q92851 521 aa11.82□□□□□ -0.52
UBE4B-210ENST00000488228 TATDN2Q93075 761 aa11.82□□□□□ -0.52
UBE4B-210ENST00000488228 LPIN3Q9BQK8 851 aa11.82□□□□□ -0.52
UBE4B-210ENST00000488228 SYT15Q9BQS2 421 aa11.82□□□□□ -0.52
UBE4B-210ENST00000488228 BCO2Q9BYV7 579 aa11.82□□□□□ -0.52
UBE4B-210ENST00000488228 ZCWPW1Q9H0M4 648 aa11.82□□□□□ -0.52
UBE4B-210ENST00000488228 SNX25Q9H3E2 840 aa11.82□□□□□ -0.52
UBE4B-210ENST00000488228 DPEP3Q9H4B8 488 aa11.82□□□□□ -0.52
UBE4B-210ENST00000488228 UNC80Q8N2C7 3258 aa11.82□□□□□ -0.52
UBE4B-210ENST00000488228 DOCK8Q8NF50 2099 aa11.82□□□□□ -0.52
UBE4B-210ENST00000488228 MTMR11A4FU01 709 aa11.81□□□□□ -0.52
UBE4B-210ENST00000488228 PMM2O15305 246 aa11.81□□□□□ -0.52
UBE4B-210ENST00000488228 P4HA2O15460 535 aa11.81□□□□□ -0.52
UBE4B-210ENST00000488228 ATP2C2O75185 946 aa11.81□□□□□ -0.52
UBE4B-210ENST00000488228 TACC1O75410 805 aa11.81□□□□□ -0.52
UBE4B-210ENST00000488228 RFPL2O75678 378 aa11.81□□□□□ -0.52
UBE4B-210ENST00000488228 SEC24AO95486 1093 aa11.81□□□□□ -0.52
UBE4B-210ENST00000488228 C8AP07357 584 aa11.81□□□□□ -0.52
UBE4B-210ENST00000488228 PDGFRBP09619 1106 aa11.81□□□□□ -0.52
UBE4B-210ENST00000488228 TSPY1Q01534 308 aa11.81□□□□□ -0.52
UBE4B-210ENST00000488228 VWA3BQ502W6 1294 aa11.81□□□□□ -0.52
UBE4B-210ENST00000488228 WDR44Q5JSH3 913 aa11.81□□□□□ -0.52
UBE4B-210ENST00000488228 RARS2Q5T160 578 aaKnown RBP11.81□□□□□ -0.52
UBE4B-210ENST00000488228 LIN9Q5TKA1 542 aa11.81□□□□□ -0.52
UBE4B-210ENST00000488228 LILRA6Q6PI73 481 aa11.81□□□□□ -0.52
UBE4B-210ENST00000488228 DPH6Q7L8W6 267 aa11.81□□□□□ -0.52
UBE4B-210ENST00000488228 LRRTM3Q86VH5 581 aa11.81□□□□□ -0.52
UBE4B-210ENST00000488228 ARHGEF19Q8IW93 802 aa11.81□□□□□ -0.52
UBE4B-210ENST00000488228 THEM5Q8N1Q8 247 aa11.81□□□□□ -0.52
UBE4B-210ENST00000488228 OR6B3Q8NGW1 331 aa11.81□□□□□ -0.52
UBE4B-210ENST00000488228 LMO3Q8TAP4 145 aa11.81□□□□□ -0.52
UBE4B-210ENST00000488228 SLC7A14Q8TBB6 771 aa11.81□□□□□ -0.52
UBE4B-210ENST00000488228 SPATA18Q8TC71 538 aa11.81□□□□□ -0.52
UBE4B-210ENST00000488228 KAT5Q92993 513 aa11.81□□□□□ -0.52
UBE4B-210ENST00000488228 HLA-CQ95604 372 aa11.81□□□□□ -0.52
UBE4B-210ENST00000488228 MYLPFQ96A32 169 aa11.81□□□□□ -0.52
UBE4B-210ENST00000488228 NT5C1BQ96P26 610 aa11.81□□□□□ -0.52
UBE4B-210ENST00000488228 TWNKQ96RR1 684 aa11.81□□□□□ -0.52
UBE4B-210ENST00000488228 PKMYT1Q99640 499 aa11.81□□□□□ -0.52
UBE4B-210ENST00000488228 RHOBTB2Q9BYZ6 727 aa11.81□□□□□ -0.52
UBE4B-210ENST00000488228 VPS16Q9H269 839 aa11.81□□□□□ -0.52
UBE4B-210ENST00000488228 CRISPLD1Q9H336 500 aa11.81□□□□□ -0.52
UBE4B-210ENST00000488228 NDST4Q9H3R1 872 aa11.81□□□□□ -0.52
UBE4B-210ENST00000488228 TSPY26PQ9H489 355 aa11.81□□□□□ -0.52
UBE4B-210ENST00000488228 CRTAC1Q9NQ79 661 aa11.81□□□□□ -0.52
UBE4B-210ENST00000488228 TMLHEQ9NVH6 421 aa11.81□□□□□ -0.52
UBE4B-210ENST00000488228 DZANK1Q9NVP4 752 aa11.81□□□□□ -0.52
UBE4B-210ENST00000488228 THEGQ9P2T0 379 aa11.81□□□□□ -0.52
UBE4B-210ENST00000488228 MYBPHLA2RUH7 354 aa11.8□□□□□ -0.52
UBE4B-210ENST00000488228 BECN2A8MW95 431 aa11.8□□□□□ -0.52
UBE4B-210ENST00000488228 A8MXQ7 604 aa11.8□□□□□ -0.52
UBE4B-210ENST00000488228 PRRG1O14668 218 aa11.8□□□□□ -0.52
UBE4B-210ENST00000488228 NCK2O43639 380 aa11.8□□□□□ -0.52
UBE4B-210ENST00000488228 SOAT2O75908 522 aa11.8□□□□□ -0.52
UBE4B-210ENST00000488228 ABLIM3O94929 683 aa11.8□□□□□ -0.52
UBE4B-210ENST00000488228 PCSK1P29120 753 aa11.8□□□□□ -0.52
UBE4B-210ENST00000488228 GNL1P36915 607 aaPredicted RBP11.8□□□□□ -0.52
UBE4B-210ENST00000488228 LHX1P48742 406 aa11.8□□□□□ -0.52
UBE4B-210ENST00000488228 COPB1P53618 953 aaKnown RBP11.8□□□□□ -0.52
UBE4B-210ENST00000488228 ADCY1Q08828 1119 aa11.8□□□□□ -0.52
UBE4B-210ENST00000488228 INCA1Q0VD86 236 aa11.8□□□□□ -0.52
UBE4B-210ENST00000488228 CETN1Q12798 172 aa11.8□□□□□ -0.52
UBE4B-210ENST00000488228 GPR17Q13304 367 aa11.8□□□□□ -0.52
UBE4B-210ENST00000488228 CUL2Q13617 745 aa11.8□□□□□ -0.52
UBE4B-210ENST00000488228 MDH1BQ5I0G3 518 aa11.8□□□□□ -0.52
UBE4B-210ENST00000488228 SYCE2Q6PIF2 218 aa11.8□□□□□ -0.52
UBE4B-210ENST00000488228 TRIM65Q6PJ69 517 aa11.8□□□□□ -0.52
UBE4B-210ENST00000488228 LRSAM1Q6UWE0 723 aa11.8□□□□□ -0.52
UBE4B-210ENST00000488228 TMC5Q6UXY8 1006 aa11.8□□□□□ -0.52
UBE4B-210ENST00000488228 TMEM184AQ6ZMB5 413 aa11.8□□□□□ -0.52
UBE4B-210ENST00000488228 APTXQ7Z2E3 356 aaKnown RBP11.8□□□□□ -0.52
UBE4B-210ENST00000488228 PPM1KQ8N3J5 372 aa11.8□□□□□ -0.52
UBE4B-210ENST00000488228 ATAD1Q8NBU5 361 aa11.8□□□□□ -0.52
UBE4B-210ENST00000488228 ZNF461Q8TAF7 563 aa11.8□□□□□ -0.52
UBE4B-210ENST00000488228 FAM200AQ8TCP9 573 aa11.8□□□□□ -0.52
UBE4B-210ENST00000488228 MSLNLQ96KJ4 702 aa11.8□□□□□ -0.52
UBE4B-210ENST00000488228 ACBD6Q9BR61 282 aa11.8□□□□□ -0.52
UBE4B-210ENST00000488228 OXCT2Q9BYC2 517 aaPredicted RBP11.8□□□□□ -0.52
UBE4B-210ENST00000488228 SFXN1Q9H9B4 322 aa11.8□□□□□ -0.52
UBE4B-210ENST00000488228 CYP4F11Q9HBI6 524 aa11.8□□□□□ -0.52
UBE4B-210ENST00000488228 ABI2Q9NYB9 513 aaPredicted RBP11.8□□□□□ -0.52
UBE4B-210ENST00000488228 LIMA1Q9UHB6 759 aaKnown RBP11.8□□□□□ -0.52
UBE4B-210ENST00000488228 AFF4Q9UHB7 1163 aaKnown RBP11.8□□□□□ -0.52
UBE4B-210ENST00000488228 CD207Q9UJ71 328 aa11.8□□□□□ -0.52
UBE4B-210ENST00000488228 YIPF1Q9Y548 306 aa11.8□□□□□ -0.52
UBE4B-210ENST00000488228 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.79□□□□□ -0.52
UBE4B-210ENST00000488228 SMTNL1A8MU46 457 aa11.79□□□□□ -0.52
UBE4B-210ENST00000488228 LGALS16A8MUM7 142 aa11.79□□□□□ -0.52
UBE4B-210ENST00000488228 ZMYND10O75800 440 aa11.79□□□□□ -0.52
UBE4B-210ENST00000488228 ATF2P15336 505 aa11.79□□□□□ -0.52
UBE4B-210ENST00000488228 SLC9A1P19634 815 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms