RNA–Protein interactions for RNA: ENST00000487698.5

SF3B1-211, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-211ENST00000487698 DNA2P51530 1060 aa10.02□□□□□ -0.81
SF3B1-211ENST00000487698 LILRA4P59901 499 aa10.02□□□□□ -0.81
SF3B1-211ENST00000487698 CNGA2Q16280 664 aa10.02□□□□□ -0.81
SF3B1-211ENST00000487698 SGO2Q562F6 1265 aa10.02□□□□□ -0.81
SF3B1-211ENST00000487698 DCAF12L1Q5VU92 463 aa10.02□□□□□ -0.81
SF3B1-211ENST00000487698 MS4A14Q96JA4 679 aa10.02□□□□□ -0.81
SF3B1-211ENST00000487698 BTBD6Q96KE9 485 aa10.02□□□□□ -0.81
SF3B1-211ENST00000487698 DEFB118Q96PH6 123 aa10.02□□□□□ -0.81
SF3B1-211ENST00000487698 SMARCAL1Q9NZC9 954 aa10.02□□□□□ -0.81
SF3B1-211ENST00000487698 CEP83Q9Y592 693 aa10.02□□□□□ -0.81
SF3B1-211ENST00000487698 SCINQ9Y6U3 715 aa10.02□□□□□ -0.81
SF3B1-211ENST00000487698 TET1Q8NFU7 2136 aa10.02□□□□□ -0.81
SF3B1-211ENST00000487698 SCN5AQ14524 2016 aa10.01□□□□□ -0.81
SF3B1-211ENST00000487698 MICAL2O94851 1124 aa10.01□□□□□ -0.81
SF3B1-211ENST00000487698 THP07101 528 aa10.01□□□□□ -0.81
SF3B1-211ENST00000487698 COMTP21964 271 aa10.01□□□□□ -0.81
SF3B1-211ENST00000487698 SCNN1GP51170 649 aa10.01□□□□□ -0.81
SF3B1-211ENST00000487698 GSCP56915 257 aaPredicted RBP10.01□□□□□ -0.81
SF3B1-211ENST00000487698 MESDQ14696 234 aa10.01□□□□□ -0.81
SF3B1-211ENST00000487698 CFAP221Q4G0U5 840 aa10.01□□□□□ -0.81
SF3B1-211ENST00000487698 PTPN20Q4JDL3 420 aa10.01□□□□□ -0.81
SF3B1-211ENST00000487698 LCLAT1Q6UWP7 414 aa10.01□□□□□ -0.81
SF3B1-211ENST00000487698 RASGEF1CQ8N431 466 aa10.01□□□□□ -0.81
SF3B1-211ENST00000487698 TOP6BLQ8N6T0 577 aa10.01□□□□□ -0.81
SF3B1-211ENST00000487698 GPR161Q8N6U8 529 aaKnown RBP10.01□□□□□ -0.81
SF3B1-211ENST00000487698 MSANTD4Q8NCY6 345 aa10.01□□□□□ -0.81
SF3B1-211ENST00000487698 ACTRT1Q8TDG2 376 aa10.01□□□□□ -0.81
SF3B1-211ENST00000487698 LINC01599Q8WXQ3 324 aa10.01□□□□□ -0.81
SF3B1-211ENST00000487698 ALG3Q92685 438 aa10.01□□□□□ -0.81
SF3B1-211ENST00000487698 HEXIM2Q96MH2 286 aaKnown RBP10.01□□□□□ -0.81
SF3B1-211ENST00000487698 TRIM7Q9C029 511 aa10.01□□□□□ -0.81
SF3B1-211ENST00000487698 TSPYL2Q9H2G4 693 aaPredicted RBP10.01□□□□□ -0.81
SF3B1-211ENST00000487698 RSAD1Q9HA92 442 aa10.01□□□□□ -0.81
SF3B1-211ENST00000487698 RGS18Q9NS28 235 aa10.01□□□□□ -0.81
SF3B1-211ENST00000487698 ANAPC7Q9UJX3 599 aa10.01□□□□□ -0.81
SF3B1-211ENST00000487698 L1RE1Q9UN81 338 aa10.01□□□□□ -0.81
SF3B1-211ENST00000487698 C9IYK1 514 aa10.01□□□□□ -0.81
SF3B1-211ENST00000487698 FGFR1P11362 822 aa10.01□□□□□ -0.81
SF3B1-211ENST00000487698 SKIP12755 728 aa10.01□□□□□ -0.81
SF3B1-211ENST00000487698 SELPP16109 830 aa10.01□□□□□ -0.81
SF3B1-211ENST00000487698 HSPA6P17066 643 aa10.01□□□□□ -0.81
SF3B1-211ENST00000487698 PAFAH1B1P43034 410 aa10.01□□□□□ -0.81
SF3B1-211ENST00000487698 GPD2P43304 727 aa10.01□□□□□ -0.81
SF3B1-211ENST00000487698 STILQ15468 1287 aa10.01□□□□□ -0.81
SF3B1-211ENST00000487698 PKDCCQ504Y2 493 aa10.01□□□□□ -0.81
SF3B1-211ENST00000487698 PPP1R15BQ5SWA1 713 aa10.01□□□□□ -0.81
SF3B1-211ENST00000487698 CCDC181Q5TID7 509 aa10.01□□□□□ -0.81
SF3B1-211ENST00000487698 LRRC8DQ7L1W4 858 aa10.01□□□□□ -0.81
SF3B1-211ENST00000487698 DPH6Q7L8W6 267 aa10.01□□□□□ -0.81
SF3B1-211ENST00000487698 RTN4RL1Q86UN2 441 aaPredicted RBP10.01□□□□□ -0.81
SF3B1-211ENST00000487698 ERICH1Q86X53 443 aa10.01□□□□□ -0.81
SF3B1-211ENST00000487698 ECHDC2Q86YB7 292 aa10.01□□□□□ -0.81
SF3B1-211ENST00000487698 CPNE8Q86YQ8 564 aa10.01□□□□□ -0.81
SF3B1-211ENST00000487698 MMGT1Q8N4V1 131 aa10.01□□□□□ -0.81
SF3B1-211ENST00000487698 SPATA4Q8NEY3 305 aa10.01□□□□□ -0.81
SF3B1-211ENST00000487698 PGBD4Q96DM1 585 aa10.01□□□□□ -0.81
SF3B1-211ENST00000487698 CARD9Q9H257 536 aa10.01□□□□□ -0.81
SF3B1-211ENST00000487698 EPC1Q9H2F5 836 aa10.01□□□□□ -0.81
SF3B1-211ENST00000487698 ANKZF1Q9H8Y5 726 aa10.01□□□□□ -0.81
SF3B1-211ENST00000487698 MRPL47Q9HD33 250 aaKnown RBP10.01□□□□□ -0.81
SF3B1-211ENST00000487698 PARVAQ9NVD7 372 aa10.01□□□□□ -0.81
SF3B1-211ENST00000487698 TTC7AQ9ULT0 858 aaPredicted RBP10.01□□□□□ -0.81
SF3B1-211ENST00000487698 TMEM110-MUSTN1A8MSY1 372 aa10□□□□□ -0.81
SF3B1-211ENST00000487698 M0QYV0 167 aa10□□□□□ -0.81
SF3B1-211ENST00000487698 FAM163BP0C2L3 166 aa10□□□□□ -0.81
SF3B1-211ENST00000487698 H2AFXP16104 143 aaPredicted RBP10□□□□□ -0.81
SF3B1-211ENST00000487698 WARSP23381 471 aaKnown RBP10□□□□□ -0.81
SF3B1-211ENST00000487698 IGFBP6P24592 240 aaPredicted RBP10□□□□□ -0.81
SF3B1-211ENST00000487698 CTNNA2P26232 953 aa10□□□□□ -0.81
SF3B1-211ENST00000487698 CTNNA1P35221 906 aaKnown RBP10□□□□□ -0.81
SF3B1-211ENST00000487698 MARCKSL1P49006 195 aa10□□□□□ -0.81
SF3B1-211ENST00000487698 MNX1P50219 401 aaPredicted RBP10□□□□□ -0.81
SF3B1-211ENST00000487698 PEX5P50542 639 aa10□□□□□ -0.81
SF3B1-211ENST00000487698 C2orf54Q08AI8 447 aa10□□□□□ -0.81
SF3B1-211ENST00000487698 PHLDB2Q86SQ0 1253 aa10□□□□□ -0.81
SF3B1-211ENST00000487698 ACOT1Q86TX2 421 aa10□□□□□ -0.81
SF3B1-211ENST00000487698 CRYBG2Q8N1P7 616 aa10□□□□□ -0.81
SF3B1-211ENST00000487698 C12orf29Q8N999 325 aa10□□□□□ -0.81
SF3B1-211ENST00000487698 C3orf20Q8ND61 904 aa10□□□□□ -0.81
SF3B1-211ENST00000487698 APPL2Q8NEU8 664 aa10□□□□□ -0.81
SF3B1-211ENST00000487698 KRT35Q92764 455 aa10□□□□□ -0.81
SF3B1-211ENST00000487698 CPXM1Q96SM3 734 aa10□□□□□ -0.81
SF3B1-211ENST00000487698 RNF208Q9H0X6 261 aa10□□□□□ -0.81
SF3B1-211ENST00000487698 WNT8AQ9H1J5 351 aa10□□□□□ -0.81
SF3B1-211ENST00000487698 UBN1Q9NPG3 1134 aa10□□□□□ -0.81
SF3B1-211ENST00000487698 TMEM59LQ9UK28 342 aa10□□□□□ -0.81
SF3B1-211ENST00000487698 TSPAN16Q9UKR8 245 aa10□□□□□ -0.81
SF3B1-211ENST00000487698 STRIP2Q9ULQ0 834 aa10□□□□□ -0.81
SF3B1-211ENST00000487698 CCDC66A2RUB6 948 aa10□□□□□ -0.81
SF3B1-211ENST00000487698 TMEM191CA6NGB0 347 aa10□□□□□ -0.81
SF3B1-211ENST00000487698 PITPNM1O00562 1244 aa10□□□□□ -0.81
SF3B1-211ENST00000487698 PODXLO00592 558 aa10□□□□□ -0.81
SF3B1-211ENST00000487698 HCRTO43612 131 aa10□□□□□ -0.81
SF3B1-211ENST00000487698 PROSCO94903 275 aa10□□□□□ -0.81
SF3B1-211ENST00000487698 PFKMP08237 780 aa10□□□□□ -0.81
SF3B1-211ENST00000487698 RPL9P32969 192 aaKnown RBP10□□□□□ -0.81
SF3B1-211ENST00000487698 GABRB2P47870 512 aa10□□□□□ -0.81
SF3B1-211ENST00000487698 AARSP49588 968 aaKnown RBP eCLIP10□□□□□ -0.81
SF3B1-211ENST00000487698 CLCNKBP51801 687 aa10□□□□□ -0.81
SF3B1-211ENST00000487698 GRIK3Q13003 919 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms