RNA–Protein interactions for RNA: ENST00000487667.5

PHF1-209, Transcript of PHD finger protein 1, humanhuman

TSL 5

Gene PHF1, Length 1,930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-209ENST00000487667 SLITRK6Q9H5Y7 841 aa21.59■■□□□ 1.05
PHF1-209ENST00000487667 FAM105AQ9NUU6 356 aa21.59■■□□□ 1.05
PHF1-209ENST00000487667 WBP1LQ9NX94 342 aa21.59■■□□□ 1.05
PHF1-209ENST00000487667 EHD2Q9NZN4 543 aa21.59■■□□□ 1.05
PHF1-209ENST00000487667 TUBGCP4Q9UGJ1 667 aa21.59■■□□□ 1.05
PHF1-209ENST00000487667 WDR3Q9UNX4 943 aaKnown RBP eCLIP21.59■■□□□ 1.05
PHF1-209ENST00000487667 TRIM17Q9Y577 477 aa21.59■■□□□ 1.05
PHF1-209ENST00000487667 SNX9Q9Y5X1 595 aa21.59■■□□□ 1.05
PHF1-209ENST00000487667 ITGA4P13612 1032 aa21.59■■□□□ 1.05
PHF1-209ENST00000487667 TNFRSF8P28908 595 aa21.59■■□□□ 1.05
PHF1-209ENST00000487667 LRPAP1P30533 357 aa21.59■■□□□ 1.05
PHF1-209ENST00000487667 TAF6P49848 677 aa21.59■■□□□ 1.05
PHF1-209ENST00000487667 NDST1P52848 882 aa21.59■■□□□ 1.05
PHF1-209ENST00000487667 VSNL1P62760 191 aa21.59■■□□□ 1.05
PHF1-209ENST00000487667 NFX1Q12986 1120 aaKnown RBP21.59■■□□□ 1.05
PHF1-209ENST00000487667 LONRF2Q1L5Z9 754 aa21.59■■□□□ 1.05
PHF1-209ENST00000487667 FAM43BQ6ZT52 329 aaPredicted RBP21.59■■□□□ 1.05
PHF1-209ENST00000487667 DPH6Q7L8W6 267 aa21.59■■□□□ 1.05
PHF1-209ENST00000487667 LRRC1Q9BTT6 524 aa21.59■■□□□ 1.05
PHF1-209ENST00000487667 GIT1Q9Y2X7 761 aa21.59■■□□□ 1.05
PHF1-209ENST00000487667 FGGP02679 453 aa21.58■■□□□ 1.04
PHF1-209ENST00000487667 PTPROQ16827 1216 aa21.58■■□□□ 1.04
PHF1-209ENST00000487667 LCLAT1Q6UWP7 414 aa21.58■■□□□ 1.04
PHF1-209ENST00000487667 MAATS1Q7Z4T9 603 aa21.58■■□□□ 1.04
PHF1-209ENST00000487667 IFT20Q8IY31 132 aa21.58■■□□□ 1.04
PHF1-209ENST00000487667 ARRDC4Q8NCT1 418 aa21.58■■□□□ 1.04
PHF1-209ENST00000487667 CCDC26Q8TAB7 109 aa21.58■■□□□ 1.04
PHF1-209ENST00000487667 MAIP1Q8WWC4 291 aa21.58■■□□□ 1.04
PHF1-209ENST00000487667 SMARCAL1Q9NZC9 954 aa21.58■■□□□ 1.04
PHF1-209ENST00000487667 GRIN2DO15399 1336 aa21.57■■□□□ 1.04
PHF1-209ENST00000487667 PSTPIP1O43586 416 aa21.57■■□□□ 1.04
PHF1-209ENST00000487667 PAK2Q13177 524 aa21.57■■□□□ 1.04
PHF1-209ENST00000487667 GLRA4Q5JXX5 417 aa21.57■■□□□ 1.04
PHF1-209ENST00000487667 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP21.57■■□□□ 1.04
PHF1-209ENST00000487667 C18orf25Q96B23 403 aaPredicted RBP21.57■■□□□ 1.04
PHF1-209ENST00000487667 CHORDC1Q9UHD1 332 aaPredicted RBP21.57■■□□□ 1.04
PHF1-209ENST00000487667 MTUS1Q9ULD2 1270 aa21.57■■□□□ 1.04
PHF1-209ENST00000487667 KPNA7A9QM74 516 aa21.57■■□□□ 1.04
PHF1-209ENST00000487667 O00370 1275 aa21.57■■□□□ 1.04
PHF1-209ENST00000487667 ZNF623O75123 536 aa21.57■■□□□ 1.04
PHF1-209ENST00000487667 INHAP05111 366 aa21.57■■□□□ 1.04
PHF1-209ENST00000487667 CTSHP09668 335 aa21.57■■□□□ 1.04
PHF1-209ENST00000487667 SETSIPP0DME0 302 aa21.57■■□□□ 1.04
PHF1-209ENST00000487667 ZNF268Q14587 947 aaPredicted RBP21.57■■□□□ 1.04
PHF1-209ENST00000487667 DCUN1D2Q6PH85 259 aa21.57■■□□□ 1.04
PHF1-209ENST00000487667 MRPL10Q7Z7H8 261 aaKnown RBP21.57■■□□□ 1.04
PHF1-209ENST00000487667 WDTC1Q8N5D0 677 aa21.57■■□□□ 1.04
PHF1-209ENST00000487667 DNAJC5GQ8N7S2 189 aa21.57■■□□□ 1.04
PHF1-209ENST00000487667 EIF1ADQ8N9N8 165 aaKnown RBP21.57■■□□□ 1.04
PHF1-209ENST00000487667 IPO4Q8TEX9 1081 aaKnown RBP21.57■■□□□ 1.04
PHF1-209ENST00000487667 ALG3Q92685 438 aa21.57■■□□□ 1.04
PHF1-209ENST00000487667 C18orf8Q96DM3 657 aa21.57■■□□□ 1.04
PHF1-209ENST00000487667 RUNDC3BQ96NL0 473 aa21.57■■□□□ 1.04
PHF1-209ENST00000487667 KRT12Q99456 494 aa21.57■■□□□ 1.04
PHF1-209ENST00000487667 ERVK-5Q9HDB9 667 aa21.57■■□□□ 1.04
PHF1-209ENST00000487667 UBN1Q9NPG3 1134 aa21.57■■□□□ 1.04
PHF1-209ENST00000487667 TRIP11Q15643 1979 aa21.56■■□□□ 1.04
PHF1-209ENST00000487667 TMEM191CA6NGB0 347 aa21.56■■□□□ 1.04
PHF1-209ENST00000487667 PAX3P23760 479 aa21.56■■□□□ 1.04
PHF1-209ENST00000487667 RNASE9P60153 205 aaKnown RBP21.56■■□□□ 1.04
PHF1-209ENST00000487667 PIGHQ14442 188 aaPredicted RBP21.56■■□□□ 1.04
PHF1-209ENST00000487667 DCAF12L1Q5VU92 463 aa21.56■■□□□ 1.04
PHF1-209ENST00000487667 DENND1BQ6P3S1 775 aa21.56■■□□□ 1.04
PHF1-209ENST00000487667 RHOT1Q8IXI2 618 aa21.56■■□□□ 1.04
PHF1-209ENST00000487667 BTBD6Q96KE9 485 aa21.56■■□□□ 1.04
PHF1-209ENST00000487667 TWNKQ96RR1 684 aa21.56■■□□□ 1.04
PHF1-209ENST00000487667 RNF39Q9H2S5 420 aa21.56■■□□□ 1.04
PHF1-209ENST00000487667 SYNCQ9H7C4 482 aa21.56■■□□□ 1.04
PHF1-209ENST00000487667 RNF216Q9NWF9 866 aaPredicted RBP21.56■■□□□ 1.04
PHF1-209ENST00000487667 KLK14Q9P0G3 267 aa21.56■■□□□ 1.04
PHF1-209ENST00000487667 A0A0U1RQG5 324 aaPredicted RBP21.55■■□□□ 1.04
PHF1-209ENST00000487667 MICAL2O94851 1124 aa21.55■■□□□ 1.04
PHF1-209ENST00000487667 GRK4P32298 578 aa21.55■■□□□ 1.04
PHF1-209ENST00000487667 CETN2P41208 172 aa21.55■■□□□ 1.04
PHF1-209ENST00000487667 GABRB2P47870 512 aa21.55■■□□□ 1.04
PHF1-209ENST00000487667 BEND6Q5SZJ8 279 aaPredicted RBP21.55■■□□□ 1.04
PHF1-209ENST00000487667 CCNI2Q6ZMN8 369 aaPredicted RBP21.55■■□□□ 1.04
PHF1-209ENST00000487667 HDXQ7Z353 690 aa21.55■■□□□ 1.04
PHF1-209ENST00000487667 TOP6BLQ8N6T0 577 aa21.55■■□□□ 1.04
PHF1-209ENST00000487667 FNIP1Q8TF40 1166 aa21.55■■□□□ 1.04
PHF1-209ENST00000487667 PGBD4Q96DM1 585 aa21.55■■□□□ 1.04
PHF1-209ENST00000487667 PPP1R10Q96QC0 940 aaKnown RBP21.55■■□□□ 1.04
PHF1-209ENST00000487667 ZMYND15Q9H091 742 aa21.55■■□□□ 1.04
PHF1-209ENST00000487667 SLTMQ9NWH9 1034 aaKnown RBP eCLIP21.55■■□□□ 1.04
PHF1-209ENST00000487667 PTCH2Q9Y6C5 1203 aa21.55■■□□□ 1.04
PHF1-209ENST00000487667 TCRBV5S1A1TA0A578 114 aa21.55■■□□□ 1.04
PHF1-209ENST00000487667 FAM170AA1A519 330 aa21.55■■□□□ 1.04
PHF1-209ENST00000487667 M0QYV0 167 aa21.55■■□□□ 1.04
PHF1-209ENST00000487667 HUS1O60921 280 aa21.55■■□□□ 1.04
PHF1-209ENST00000487667 LRRC38Q5VT99 294 aa21.55■■□□□ 1.04
PHF1-209ENST00000487667 APPL2Q8NEU8 664 aa21.55■■□□□ 1.04
PHF1-209ENST00000487667 KRT35Q92764 455 aa21.55■■□□□ 1.04
PHF1-209ENST00000487667 WNT8BQ93098 351 aa21.55■■□□□ 1.04
PHF1-209ENST00000487667 PADI3Q9ULW8 664 aa21.55■■□□□ 1.04
PHF1-209ENST00000487667 SIGLEC16A6NMB1 481 aa21.54■■□□□ 1.04
PHF1-209ENST00000487667 PPP1R15BQ5SWA1 713 aa21.54■■□□□ 1.04
PHF1-209ENST00000487667 LIMS2Q7Z4I7 341 aa21.54■■□□□ 1.04
PHF1-209ENST00000487667 NIPA2Q8N8Q9 360 aa21.54■■□□□ 1.04
PHF1-209ENST00000487667 HESX1Q9UBX0 185 aa21.54■■□□□ 1.04
PHF1-209ENST00000487667 HMGXB4Q9UGU5 601 aa21.54■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms