RNA–Protein interactions for RNA: ENST00000487245.5

HLA-C-208, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-208ENST00000487245 RIBC1Q8N443 379 aaPredicted RBP27.58■■■□□ 2.01
HLA-C-208ENST00000487245 ZCCHC9Q8N567 271 aaKnown RBP27.58■■■□□ 2.01
HLA-C-208ENST00000487245 CDCA5Q96FF9 252 aa27.58■■■□□ 2.01
HLA-C-208ENST00000487245 SGSM3Q96HU1 749 aa27.58■■■□□ 2.01
HLA-C-208ENST00000487245 ELAC2Q9BQ52 826 aaKnown RBP27.58■■■□□ 2.01
HLA-C-208ENST00000487245 CCDC77Q9BR77 488 aa27.58■■■□□ 2.01
HLA-C-208ENST00000487245 R3HDMLQ9H3Y0 253 aa27.58■■■□□ 2.01
HLA-C-208ENST00000487245 EURLQ9NYK6 297 aa27.58■■■□□ 2.01
HLA-C-208ENST00000487245 SNX3O60493 162 aa27.57■■■□□ 2
HLA-C-208ENST00000487245 SSTR3P32745 418 aaPredicted RBP27.57■■■□□ 2
HLA-C-208ENST00000487245 COPS2P61201 443 aa27.57■■■□□ 2
HLA-C-208ENST00000487245 NFX1Q12986 1120 aaKnown RBP27.57■■■□□ 2
HLA-C-208ENST00000487245 MOGSQ13724 837 aa27.57■■■□□ 2
HLA-C-208ENST00000487245 TMEM132AQ24JP5 1023 aa27.57■■■□□ 2
HLA-C-208ENST00000487245 ZNF484Q5JVG2 852 aa27.57■■■□□ 2
HLA-C-208ENST00000487245 EFCAB12Q6NXP0 572 aa27.57■■■□□ 2
HLA-C-208ENST00000487245 FBXO16Q8IX29 292 aaPredicted RBP27.57■■■□□ 2
HLA-C-208ENST00000487245 CKAP2Q8WWK9 683 aa27.57■■■□□ 2
HLA-C-208ENST00000487245 TCRBV5S1A1TA0A578 114 aa27.57■■■□□ 2
HLA-C-208ENST00000487245 INO80B-WBP1J3KQ70 363 aa27.57■■■□□ 2
HLA-C-208ENST00000487245 CDH16O75309 829 aa27.57■■■□□ 2
HLA-C-208ENST00000487245 CD58P19256 250 aa27.57■■■□□ 2
HLA-C-208ENST00000487245 MNAT1P51948 309 aa27.57■■■□□ 2
HLA-C-208ENST00000487245 PIGHQ14442 188 aaPredicted RBP27.57■■■□□ 2
HLA-C-208ENST00000487245 CHADLQ6NUI6 762 aa27.57■■■□□ 2
HLA-C-208ENST00000487245 INO80BQ9C086 356 aaPredicted RBP27.57■■■□□ 2
HLA-C-208ENST00000487245 RPF1Q9H9Y2 349 aaKnown RBP27.57■■■□□ 2
HLA-C-208ENST00000487245 CHUKO15111 745 aa27.56■■■□□ 2
HLA-C-208ENST00000487245 BRD2P25440 801 aaKnown RBP27.56■■■□□ 2
HLA-C-208ENST00000487245 IFNAR2P48551 515 aa27.56■■■□□ 2
HLA-C-208ENST00000487245 MKRN3Q13064 507 aaKnown RBP27.56■■■□□ 2
HLA-C-208ENST00000487245 ERICH1Q86X53 443 aa27.56■■■□□ 2
HLA-C-208ENST00000487245 THNSL1Q8IYQ7 743 aa27.56■■■□□ 2
HLA-C-208ENST00000487245 GTF3C2Q8WUA4 911 aaPredicted RBP27.56■■■□□ 2
HLA-C-208ENST00000487245 NLRP4Q96MN2 994 aa27.56■■■□□ 2
HLA-C-208ENST00000487245 XYLT2Q9H1B5 865 aa27.56■■■□□ 2
HLA-C-208ENST00000487245 PRMT7Q9NVM4 692 aaPredicted RBP27.56■■■□□ 2
HLA-C-208ENST00000487245 ERAP1Q9NZ08 941 aa27.56■■■□□ 2
HLA-C-208ENST00000487245 STRIP2Q9ULQ0 834 aa27.56■■■□□ 2
HLA-C-208ENST00000487245 DRG1Q9Y295 367 aaKnown RBP27.56■■■□□ 2
HLA-C-208ENST00000487245 MED7O43513 233 aa27.55■■■□□ 2
HLA-C-208ENST00000487245 LIASO43766 372 aa27.55■■■□□ 2
HLA-C-208ENST00000487245 DAB2IPQ5VWQ8 1189 aa27.55■■■□□ 2
HLA-C-208ENST00000487245 GPAT2Q6NUI2 795 aa27.55■■■□□ 2
HLA-C-208ENST00000487245 CYB5D1Q6P9G0 228 aa27.55■■■□□ 2
HLA-C-208ENST00000487245 DCUN1D2Q6PH85 259 aa27.55■■■□□ 2
HLA-C-208ENST00000487245 TRPM8Q7Z2W7 1104 aa27.55■■■□□ 2
HLA-C-208ENST00000487245 ANKS1BQ7Z6G8 1248 aa27.55■■■□□ 2
HLA-C-208ENST00000487245 MAGEC3Q8TD91 643 aa27.55■■■□□ 2
HLA-C-208ENST00000487245 SLITRK1Q96PX8 696 aa27.55■■■□□ 2
HLA-C-208ENST00000487245 DDX56Q9NY93 547 aaKnown RBP27.55■■■□□ 2
HLA-C-208ENST00000487245 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP27.55■■■□□ 2
HLA-C-208ENST00000487245 RNF181Q9P0P0 153 aa27.55■■■□□ 2
HLA-C-208ENST00000487245 NDC80O14777 642 aa27.55■■■□□ 2
HLA-C-208ENST00000487245 POLR2BP30876 1174 aaKnown RBP27.55■■■□□ 2
HLA-C-208ENST00000487245 TNFAIP2Q03169 654 aa27.55■■■□□ 2
HLA-C-208ENST00000487245 MBTD1Q05BQ5 628 aa27.55■■■□□ 2
HLA-C-208ENST00000487245 FAM187BQ17R55 369 aa27.55■■■□□ 2
HLA-C-208ENST00000487245 SCARA3Q6AZY7 606 aa27.55■■■□□ 2
HLA-C-208ENST00000487245 ZC3H15Q8WU90 426 aaKnown RBP27.55■■■□□ 2
HLA-C-208ENST00000487245 DYDC1Q8WWB3 177 aa27.55■■■□□ 2
HLA-C-208ENST00000487245 OPTNQ96CV9 577 aa27.55■■■□□ 2
HLA-C-208ENST00000487245 LHX5Q9H2C1 402 aa27.55■■■□□ 2
HLA-C-208ENST00000487245 HAUS2Q9NVX0 235 aa27.55■■■□□ 2
HLA-C-208ENST00000487245 USP15Q9Y4E8 981 aaPredicted RBP27.55■■■□□ 2
HLA-C-208ENST00000487245 TJP3O95049 919 aa27.54■■■□□ 2
HLA-C-208ENST00000487245 ASPAP45381 313 aa27.54■■■□□ 2
HLA-C-208ENST00000487245 PHKA2P46019 1235 aa27.54■■■□□ 2
HLA-C-208ENST00000487245 EAPPQ56P03 285 aaPredicted RBP27.54■■■□□ 2
HLA-C-208ENST00000487245 NIPA2Q8N8Q9 360 aa27.54■■■□□ 2
HLA-C-208ENST00000487245 PLCD4Q9BRC7 762 aa27.54■■■□□ 2
HLA-C-208ENST00000487245 DNALI1O14645 258 aaPredicted RBP27.53■■■□□ 2
HLA-C-208ENST00000487245 RPL7AP62424 266 aaKnown RBP27.53■■■□□ 2
HLA-C-208ENST00000487245 LAMC2Q13753 1193 aa27.53■■■□□ 2
HLA-C-208ENST00000487245 CCDC142Q17RM4 750 aa27.53■■■□□ 2
HLA-C-208ENST00000487245 PPP1R15BQ5SWA1 713 aa27.53■■■□□ 2
HLA-C-208ENST00000487245 WDR78Q5VTH9 848 aa27.53■■■□□ 2
HLA-C-208ENST00000487245 USP50Q70EL3 339 aaPredicted RBP27.53■■■□□ 2
HLA-C-208ENST00000487245 PARP9Q8IXQ6 854 aa27.53■■■□□ 2
HLA-C-208ENST00000487245 COPS5Q92905 334 aa27.53■■■□□ 2
HLA-C-208ENST00000487245 CDT1Q9H211 546 aa27.53■■■□□ 2
HLA-C-208ENST00000487245 CTNNAL1Q9UBT7 734 aa27.53■■■□□ 2
HLA-C-208ENST00000487245 NAALADL1Q9UQQ1 740 aa27.53■■■□□ 2
HLA-C-208ENST00000487245 MAGEB2O15479 319 aa27.53■■■□□ 2
HLA-C-208ENST00000487245 WEE2P0C1S8 567 aa27.53■■■□□ 2
HLA-C-208ENST00000487245 BRAFP15056 766 aa27.53■■■□□ 2
HLA-C-208ENST00000487245 CREB1P16220 341 aa27.53■■■□□ 2
HLA-C-208ENST00000487245 MAGEA4P43358 317 aa27.53■■■□□ 2
HLA-C-208ENST00000487245 LACTBP83111 547 aaPredicted RBP27.53■■■□□ 2
HLA-C-208ENST00000487245 NR1H3Q13133 447 aa27.53■■■□□ 2
HLA-C-208ENST00000487245 KYAT1Q16773 422 aa27.53■■■□□ 2
HLA-C-208ENST00000487245 EEF1DP3Q658K8 133 aa27.53■■■□□ 2
HLA-C-208ENST00000487245 TRAPPC12Q8WVT3 735 aa27.53■■■□□ 2
HLA-C-208ENST00000487245 TTC25Q96NG3 672 aa27.53■■■□□ 2
HLA-C-208ENST00000487245 C22orf31O95567 290 aa27.52■■■□□ 2
HLA-C-208ENST00000487245 GJC1P36383 396 aa27.52■■■□□ 2
HLA-C-208ENST00000487245 VPS41P49754 854 aa27.52■■■□□ 2
HLA-C-208ENST00000487245 CLCN3P51790 818 aa27.52■■■□□ 2
HLA-C-208ENST00000487245 ZNF667Q5HYK9 610 aa27.52■■■□□ 2
HLA-C-208ENST00000487245 MOB2Q70IA6 237 aa27.52■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms