RNA–Protein interactions for RNA: ENST00000487169.5

HDLBP-241, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 4,339 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-241ENST00000487169 C4orf33Q8N1A6 199 aa13.98□□□□□ -0.17
HDLBP-241ENST00000487169 LATS2Q9NRM7 1088 aa13.98□□□□□ -0.17
HDLBP-241ENST00000487169 STAG3L1P0CL83 205 aa13.98□□□□□ -0.17
HDLBP-241ENST00000487169 MAGEA9P43362 315 aa13.98□□□□□ -0.17
HDLBP-241ENST00000487169 ERVK-24P63145 666 aa13.98□□□□□ -0.17
HDLBP-241ENST00000487169 CAPRIN1Q14444 709 aaKnown RBP13.98□□□□□ -0.17
HDLBP-241ENST00000487169 LONRF1Q17RB8 773 aa13.98□□□□□ -0.17
HDLBP-241ENST00000487169 PPHLN1Q8NEY8 458 aaKnown RBP13.98□□□□□ -0.17
HDLBP-241ENST00000487169 ATP8B4Q8TF62 1192 aa13.98□□□□□ -0.17
HDLBP-241ENST00000487169 LACRTQ9GZZ8 138 aa13.98□□□□□ -0.17
HDLBP-241ENST00000487169 SLIT1O75093 1534 aa13.97□□□□□ -0.17
HDLBP-241ENST00000487169 M0QYT0 321 aa13.97□□□□□ -0.17
HDLBP-241ENST00000487169 ATP5HO75947 161 aa13.97□□□□□ -0.17
HDLBP-241ENST00000487169 MAP3K6O95382 1288 aa13.97□□□□□ -0.17
HDLBP-241ENST00000487169 ASMTLO95671 621 aa13.97□□□□□ -0.17
HDLBP-241ENST00000487169 CYP11B1P15538 503 aa13.97□□□□□ -0.17
HDLBP-241ENST00000487169 CNTN2Q02246 1040 aa13.97□□□□□ -0.17
HDLBP-241ENST00000487169 PGM5Q15124 567 aa13.97□□□□□ -0.17
HDLBP-241ENST00000487169 FIGNQ5HY92 759 aa13.97□□□□□ -0.17
HDLBP-241ENST00000487169 NLRP14Q86W24 1093 aa13.97□□□□□ -0.17
HDLBP-241ENST00000487169 CD302Q8IX05 232 aa13.97□□□□□ -0.17
HDLBP-241ENST00000487169 TPCN2Q8NHX9 752 aa13.97□□□□□ -0.17
HDLBP-241ENST00000487169 PTPRN2Q92932 1015 aa13.97□□□□□ -0.17
HDLBP-241ENST00000487169 DCUN1D1Q96GG9 259 aa13.97□□□□□ -0.17
HDLBP-241ENST00000487169 MUC3BQ9H195 1237 aa13.97□□□□□ -0.17
HDLBP-241ENST00000487169 CYP4F11Q9HBI6 524 aa13.97□□□□□ -0.17
HDLBP-241ENST00000487169 ANGPTL2Q9UKU9 493 aa13.97□□□□□ -0.17
HDLBP-241ENST00000487169 NWD1Q149M9 1564 aa13.97□□□□□ -0.17
HDLBP-241ENST00000487169 KCNA2P16389 499 aa13.97□□□□□ -0.17
HDLBP-241ENST00000487169 FKBP1CQ5VVH2 108 aa13.97□□□□□ -0.17
HDLBP-241ENST00000487169 SLC13A5Q86YT5 568 aaPredicted RBP13.97□□□□□ -0.17
HDLBP-241ENST00000487169 IPMKQ8NFU5 416 aa13.97□□□□□ -0.17
HDLBP-241ENST00000487169 PIP4K2CQ8TBX8 421 aa13.97□□□□□ -0.17
HDLBP-241ENST00000487169 CCDC124Q96CT7 223 aaKnown RBP13.97□□□□□ -0.17
HDLBP-241ENST00000487169 CYFIP2Q96F07 1278 aa13.97□□□□□ -0.17
HDLBP-241ENST00000487169 SETD4Q9NVD3 440 aa13.97□□□□□ -0.17
HDLBP-241ENST00000487169 SMIM22K7EJ46 135 aa13.97□□□□□ -0.17
HDLBP-241ENST00000487169 MAP3K7O43318 606 aa13.97□□□□□ -0.17
HDLBP-241ENST00000487169 AGTP01019 485 aa13.97□□□□□ -0.17
HDLBP-241ENST00000487169 USP10Q14694 798 aaKnown RBP13.97□□□□□ -0.17
HDLBP-241ENST00000487169 SNX17Q15036 470 aa13.97□□□□□ -0.17
HDLBP-241ENST00000487169 GRIK5Q16478 980 aa13.97□□□□□ -0.17
HDLBP-241ENST00000487169 LY6KQ17RY6 165 aa13.97□□□□□ -0.17
HDLBP-241ENST00000487169 MIB1Q86YT6 1006 aa13.97□□□□□ -0.17
HDLBP-241ENST00000487169 OR2W6PQ8NHA6 318 aa13.97□□□□□ -0.17
HDLBP-241ENST00000487169 TMC2Q8TDI7 906 aa13.97□□□□□ -0.17
HDLBP-241ENST00000487169 BHMTQ93088 406 aa13.97□□□□□ -0.17
HDLBP-241ENST00000487169 FOXP3Q9BZS1 431 aa13.97□□□□□ -0.17
HDLBP-241ENST00000487169 CATSPERBQ9H7T0 1116 aa13.97□□□□□ -0.17
HDLBP-241ENST00000487169 KIAA1257Q9ULG3 409 aa13.97□□□□□ -0.17
HDLBP-241ENST00000487169 SH3BP1Q9Y3L3 701 aa13.97□□□□□ -0.17
HDLBP-241ENST00000487169 PCDHB7Q9Y5E2 793 aa13.97□□□□□ -0.17
HDLBP-241ENST00000487169 ADM5C9JUS6 153 aa13.96□□□□□ -0.17
HDLBP-241ENST00000487169 PDHXO00330 501 aa13.96□□□□□ -0.17
HDLBP-241ENST00000487169 E2F6O75461 281 aa13.96□□□□□ -0.17
HDLBP-241ENST00000487169 NDUFS3O75489 264 aa13.96□□□□□ -0.17
HDLBP-241ENST00000487169 RRM1P23921 792 aa13.96□□□□□ -0.17
HDLBP-241ENST00000487169 HSPA9P38646 679 aaKnown RBP13.96□□□□□ -0.17
HDLBP-241ENST00000487169 MYL6P60660 151 aa13.96□□□□□ -0.17
HDLBP-241ENST00000487169 DDIASQ8IXT1 998 aa13.96□□□□□ -0.17
HDLBP-241ENST00000487169 ADA2Q9NZK5 511 aa13.96□□□□□ -0.17
HDLBP-241ENST00000487169 DBR1Q9UK59 544 aaKnown RBP13.96□□□□□ -0.17
HDLBP-241ENST00000487169 STRNO43815 780 aa13.96□□□□□ -0.17
HDLBP-241ENST00000487169 TFRCP02786 760 aaKnown RBP13.96□□□□□ -0.17
HDLBP-241ENST00000487169 IRF1P10914 325 aa13.96□□□□□ -0.17
HDLBP-241ENST00000487169 PEX19P40855 299 aa13.96□□□□□ -0.17
HDLBP-241ENST00000487169 MAGEA4P43358 317 aa13.96□□□□□ -0.17
HDLBP-241ENST00000487169 HARS2P49590 506 aaKnown RBP13.96□□□□□ -0.17
HDLBP-241ENST00000487169 PDE1CQ14123 709 aaPredicted RBP13.96□□□□□ -0.17
HDLBP-241ENST00000487169 PTF1AQ7RTS3 328 aa13.96□□□□□ -0.17
HDLBP-241ENST00000487169 DDX53Q86TM3 631 aaKnown RBP13.96□□□□□ -0.17
HDLBP-241ENST00000487169 KRT35Q92764 455 aa13.96□□□□□ -0.17
HDLBP-241ENST00000487169 PBXIP1Q96AQ6 731 aa13.96□□□□□ -0.17
HDLBP-241ENST00000487169 SPATA17Q96L03 361 aa13.96□□□□□ -0.17
HDLBP-241ENST00000487169 KLF6Q99612 283 aaPredicted RBP13.96□□□□□ -0.17
HDLBP-241ENST00000487169 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.96□□□□□ -0.17
HDLBP-241ENST00000487169 VDRP11473 427 aa13.96□□□□□ -0.17
HDLBP-241ENST00000487169 IFNA8P32881 189 aa13.96□□□□□ -0.17
HDLBP-241ENST00000487169 ZNF200P98182 395 aaPredicted RBP13.96□□□□□ -0.17
HDLBP-241ENST00000487169 C1orf146Q5VVC0 180 aa13.96□□□□□ -0.17
HDLBP-241ENST00000487169 FAM71DQ8N9W8 422 aa13.96□□□□□ -0.17
HDLBP-241ENST00000487169 PCSK9Q8NBP7 692 aaKnown RBP13.96□□□□□ -0.17
HDLBP-241ENST00000487169 ARRDC4Q8NCT1 418 aa13.96□□□□□ -0.17
HDLBP-241ENST00000487169 N4BP2L2Q92802 583 aaPredicted RBP13.96□□□□□ -0.17
HDLBP-241ENST00000487169 COLEC11Q9BWP8 271 aa13.96□□□□□ -0.17
HDLBP-241ENST00000487169 MRPL46Q9H2W6 279 aaKnown RBP13.96□□□□□ -0.17
HDLBP-241ENST00000487169 FRMD3A2A2Y4 597 aa13.96□□□□□ -0.18
HDLBP-241ENST00000487169 DCDC2CA8MYV0 355 aa13.96□□□□□ -0.18
HDLBP-241ENST00000487169 TCP11X1B4DZS4 312 aa13.96□□□□□ -0.18
HDLBP-241ENST00000487169 MTSS1O43312 755 aa13.96□□□□□ -0.18
HDLBP-241ENST00000487169 TLR2O60603 784 aa13.96□□□□□ -0.18
HDLBP-241ENST00000487169 ZC3H11AO75152 810 aaKnown RBP eCLIP13.96□□□□□ -0.18
HDLBP-241ENST00000487169 SASH3O75995 380 aa13.96□□□□□ -0.18
HDLBP-241ENST00000487169 ODC1P11926 461 aa13.96□□□□□ -0.18
HDLBP-241ENST00000487169 ATN1P54259 1190 aaPredicted RBP13.96□□□□□ -0.18
HDLBP-241ENST00000487169 KCNA1Q09470 495 aa13.96□□□□□ -0.18
HDLBP-241ENST00000487169 KCNT1Q5JUK3 1230 aa13.96□□□□□ -0.18
HDLBP-241ENST00000487169 ZBTB41Q5SVQ8 909 aa13.96□□□□□ -0.18
HDLBP-241ENST00000487169 OTOP1Q7RTM1 612 aa13.96□□□□□ -0.18
HDLBP-241ENST00000487169 DNAJC7Q99615 494 aa13.96□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms