RNA–Protein interactions for RNA: ENST00000487062.1

SF3A3-206, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 775 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-206ENST00000487062 SDCBP2Q9H190 292 aa7.49□□□□□ -1.21
SF3A3-206ENST00000487062 UNC93B1Q9H1C4 597 aa7.49□□□□□ -1.21
SF3A3-206ENST00000487062 LHX5Q9H2C1 402 aa7.49□□□□□ -1.21
SF3A3-206ENST00000487062 AGO3Q9H9G7 860 aaKnown RBP7.49□□□□□ -1.21
SF3A3-206ENST00000487062 OSGEPQ9NPF4 335 aa7.49□□□□□ -1.21
SF3A3-206ENST00000487062 ADAM22Q9P0K1 906 aa7.49□□□□□ -1.21
SF3A3-206ENST00000487062 TUBGCP4Q9UGJ1 667 aa7.49□□□□□ -1.21
SF3A3-206ENST00000487062 LCMT1Q9UIC8 334 aa7.49□□□□□ -1.21
SF3A3-206ENST00000487062 STRIP2Q9ULQ0 834 aa7.49□□□□□ -1.21
SF3A3-206ENST00000487062 SNX9Q9Y5X1 595 aa7.49□□□□□ -1.21
SF3A3-206ENST00000487062 A0A0U1RQF3 1178 aa7.48□□□□□ -1.21
SF3A3-206ENST00000487062 KPNA7A9QM74 516 aa7.48□□□□□ -1.21
SF3A3-206ENST00000487062 PIRO00625 290 aa7.48□□□□□ -1.21
SF3A3-206ENST00000487062 KCNK3O14649 394 aa7.48□□□□□ -1.21
SF3A3-206ENST00000487062 HUS1O60921 280 aa7.48□□□□□ -1.21
SF3A3-206ENST00000487062 LILRB3O75022 631 aa7.48□□□□□ -1.21
SF3A3-206ENST00000487062 SRGAP2O75044 1071 aa7.48□□□□□ -1.21
SF3A3-206ENST00000487062 CALCAP01258 141 aa7.48□□□□□ -1.21
SF3A3-206ENST00000487062 TUBBP07437 444 aa7.48□□□□□ -1.21
SF3A3-206ENST00000487062 MMP8P22894 467 aa7.48□□□□□ -1.21
SF3A3-206ENST00000487062 PAX3P23760 479 aa7.48□□□□□ -1.21
SF3A3-206ENST00000487062 CDH5P33151 784 aaPredicted RBP7.48□□□□□ -1.21
SF3A3-206ENST00000487062 NDST1P52848 882 aa7.48□□□□□ -1.21
SF3A3-206ENST00000487062 SNX16P57768 344 aa7.48□□□□□ -1.21
SF3A3-206ENST00000487062 TAP1Q03518 808 aa7.48□□□□□ -1.21
SF3A3-206ENST00000487062 ITIH3Q06033 890 aa7.48□□□□□ -1.21
SF3A3-206ENST00000487062 MESDQ14696 234 aa7.48□□□□□ -1.21
SF3A3-206ENST00000487062 CNGA2Q16280 664 aa7.48□□□□□ -1.21
SF3A3-206ENST00000487062 ERCC6LQ2NKX8 1250 aa7.48□□□□□ -1.21
SF3A3-206ENST00000487062 GLIPR1L2Q4G1C9 344 aa7.48□□□□□ -1.21
SF3A3-206ENST00000487062 MON1BQ7L1V2 547 aa7.48□□□□□ -1.21
SF3A3-206ENST00000487062 RSRC2Q7L4I2 434 aaKnown RBP7.48□□□□□ -1.21
SF3A3-206ENST00000487062 DPH6Q7L8W6 267 aa7.48□□□□□ -1.21
SF3A3-206ENST00000487062 ZNF572Q7Z3I7 529 aaPredicted RBP7.48□□□□□ -1.21
SF3A3-206ENST00000487062 ERICH1Q86X53 443 aa7.48□□□□□ -1.21
SF3A3-206ENST00000487062 CREG2Q8IUH2 290 aa7.48□□□□□ -1.21
SF3A3-206ENST00000487062 GPR161Q8N6U8 529 aaKnown RBP7.48□□□□□ -1.21
SF3A3-206ENST00000487062 SLC4A11Q8NBS3 891 aa7.48□□□□□ -1.21
SF3A3-206ENST00000487062 WHAMMQ8TF30 809 aa7.48□□□□□ -1.21
SF3A3-206ENST00000487062 RABGGTAQ92696 567 aa7.48□□□□□ -1.21
SF3A3-206ENST00000487062 HES6Q96HZ4 224 aa7.48□□□□□ -1.21
SF3A3-206ENST00000487062 HEXIM2Q96MH2 286 aaKnown RBP7.48□□□□□ -1.21
SF3A3-206ENST00000487062 PPP1R10Q96QC0 940 aaKnown RBP7.48□□□□□ -1.21
SF3A3-206ENST00000487062 ADAM2Q99965 735 aa7.48□□□□□ -1.21
SF3A3-206ENST00000487062 C11orf70Q9BRQ4 267 aa7.48□□□□□ -1.21
SF3A3-206ENST00000487062 MIS12Q9H081 205 aa7.48□□□□□ -1.21
SF3A3-206ENST00000487062 TRPV6Q9H1D0 765 aa7.48□□□□□ -1.21
SF3A3-206ENST00000487062 WNT8AQ9H1J5 351 aa7.48□□□□□ -1.21
SF3A3-206ENST00000487062 SNX25Q9H3E2 840 aa7.48□□□□□ -1.21
SF3A3-206ENST00000487062 RSAD1Q9HA92 442 aa7.48□□□□□ -1.21
SF3A3-206ENST00000487062 ABCB6Q9NP58 842 aa7.48□□□□□ -1.21
SF3A3-206ENST00000487062 PAK6Q9NQU5 681 aaPredicted RBP7.48□□□□□ -1.21
SF3A3-206ENST00000487062 PARVAQ9NVD7 372 aa7.48□□□□□ -1.21
SF3A3-206ENST00000487062 ARGLU1Q9NWB6 273 aaPredicted RBP7.48□□□□□ -1.21
SF3A3-206ENST00000487062 GDAP2Q9NXN4 497 aa7.48□□□□□ -1.21
SF3A3-206ENST00000487062 WDR35Q9P2L0 1181 aa7.48□□□□□ -1.21
SF3A3-206ENST00000487062 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.48□□□□□ -1.21
SF3A3-206ENST00000487062 STXBP5LQ9Y2K9 1186 aa7.48□□□□□ -1.21
SF3A3-206ENST00000487062 ALG6Q9Y672 507 aa7.48□□□□□ -1.21
SF3A3-206ENST00000487062 V9GYY5 206 aaPredicted RBP7.48□□□□□ -1.21
SF3A3-206ENST00000487062 CCDC66A2RUB6 948 aa7.47□□□□□ -1.21
SF3A3-206ENST00000487062 ARL5CA6NH57 179 aa7.47□□□□□ -1.21
SF3A3-206ENST00000487062 TMEM110-MUSTN1A8MSY1 372 aa7.47□□□□□ -1.21
SF3A3-206ENST00000487062 MYO1FO00160 1098 aa7.47□□□□□ -1.21
SF3A3-206ENST00000487062 PTGESO14684 152 aa7.47□□□□□ -1.21
SF3A3-206ENST00000487062 PPEF2O14830 753 aa7.47□□□□□ -1.21
SF3A3-206ENST00000487062 ZNF185O15231 689 aa7.47□□□□□ -1.21
SF3A3-206ENST00000487062 SPOPO43791 374 aa7.47□□□□□ -1.21
SF3A3-206ENST00000487062 EOMESO95936 686 aa7.47□□□□□ -1.21
SF3A3-206ENST00000487062 CCL5P13501 91 aa7.47□□□□□ -1.21
SF3A3-206ENST00000487062 CD46P15529 392 aa7.47□□□□□ -1.21
SF3A3-206ENST00000487062 SELPP16109 830 aa7.47□□□□□ -1.21
SF3A3-206ENST00000487062 RRM1P23921 792 aa7.47□□□□□ -1.21
SF3A3-206ENST00000487062 CXCR5P32302 372 aa7.47□□□□□ -1.21
SF3A3-206ENST00000487062 RPL9P32969 192 aaKnown RBP7.47□□□□□ -1.21
SF3A3-206ENST00000487062 MLH1P40692 756 aa7.47□□□□□ -1.21
SF3A3-206ENST00000487062 SLC1A1P43005 524 aa7.47□□□□□ -1.21
SF3A3-206ENST00000487062 CDK7P50613 346 aa7.47□□□□□ -1.21
SF3A3-206ENST00000487062 DNA2P51530 1060 aa7.47□□□□□ -1.21
SF3A3-206ENST00000487062 ELF2Q15723 593 aa7.47□□□□□ -1.21
SF3A3-206ENST00000487062 PLEKHA7Q6IQ23 1121 aa7.47□□□□□ -1.21
SF3A3-206ENST00000487062 AGMOQ6ZNB7 445 aa7.47□□□□□ -1.21
SF3A3-206ENST00000487062 MMS22LQ6ZRQ5 1243 aa7.47□□□□□ -1.21
SF3A3-206ENST00000487062 TOP6BLQ8N6T0 577 aa7.47□□□□□ -1.21
SF3A3-206ENST00000487062 RNF169Q8NCN4 708 aa7.47□□□□□ -1.21
SF3A3-206ENST00000487062 LRRN4CLQ8ND94 238 aa7.47□□□□□ -1.21
SF3A3-206ENST00000487062 C1orf131Q8NDD1 294 aaKnown RBP7.47□□□□□ -1.21
SF3A3-206ENST00000487062 APPL2Q8NEU8 664 aa7.47□□□□□ -1.21
SF3A3-206ENST00000487062 OR6B3Q8NGW1 331 aa7.47□□□□□ -1.21
SF3A3-206ENST00000487062 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.47□□□□□ -1.21
SF3A3-206ENST00000487062 IPO4Q8TEX9 1081 aaKnown RBP7.47□□□□□ -1.21
SF3A3-206ENST00000487062 COG1Q8WTW3 980 aa7.47□□□□□ -1.21
SF3A3-206ENST00000487062 TFAP2BQ92481 460 aa7.47□□□□□ -1.21
SF3A3-206ENST00000487062 TNIP3Q96KP6 325 aa7.47□□□□□ -1.21
SF3A3-206ENST00000487062 DEFB118Q96PH6 123 aa7.47□□□□□ -1.21
SF3A3-206ENST00000487062 GAD1Q99259 594 aa7.47□□□□□ -1.21
SF3A3-206ENST00000487062 PSMB7Q99436 277 aa7.47□□□□□ -1.21
SF3A3-206ENST00000487062 NAP1L3Q99457 506 aaPredicted RBP7.47□□□□□ -1.21
SF3A3-206ENST00000487062 PLVAPQ9BX97 442 aa7.47□□□□□ -1.21
SF3A3-206ENST00000487062 FTHL17Q9BXU8 183 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms