RNA–Protein interactions for RNA: ENST00000486793.5

GMDS-205, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 3

Gene GMDS, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-205ENST00000486793 RTKNQ9BST9 563 aa20.27■□□□□ 0.84
GMDS-205ENST00000486793 ST6GALNAC4Q9H4F1 302 aa20.27■□□□□ 0.84
GMDS-205ENST00000486793 BMP15O95972 392 aa20.26■□□□□ 0.83
GMDS-205ENST00000486793 HAPLN1P10915 354 aaPredicted RBP20.26■□□□□ 0.83
GMDS-205ENST00000486793 CDC25CP30307 473 aa20.26■□□□□ 0.83
GMDS-205ENST00000486793 CNR2P34972 360 aa20.26■□□□□ 0.83
GMDS-205ENST00000486793 PLCB2Q00722 1185 aa20.26■□□□□ 0.83
GMDS-205ENST00000486793 CCINQ13939 588 aa20.26■□□□□ 0.83
GMDS-205ENST00000486793 SF3A1Q15459 793 aaKnown RBP20.26■□□□□ 0.83
GMDS-205ENST00000486793 CRELD2Q6UXH1 353 aaPredicted RBP20.26■□□□□ 0.83
GMDS-205ENST00000486793 ZNF720Q7Z2F6 126 aa20.26■□□□□ 0.83
GMDS-205ENST00000486793 C2orf15Q8WU43 125 aaKnown RBP20.26■□□□□ 0.83
GMDS-205ENST00000486793 LARP4BQ92615 738 aaKnown RBP20.26■□□□□ 0.83
GMDS-205ENST00000486793 GKN1Q9NS71 199 aa20.26■□□□□ 0.83
GMDS-205ENST00000486793 THG1LQ9NWX6 298 aaKnown RBP20.26■□□□□ 0.83
GMDS-205ENST00000486793 ADSSP30520 456 aa20.25■□□□□ 0.83
GMDS-205ENST00000486793 SMARCB1Q12824 385 aa20.25■□□□□ 0.83
GMDS-205ENST00000486793 ITPRIPL2Q3MIP1 535 aa20.25■□□□□ 0.83
GMDS-205ENST00000486793 CMTM8Q8IZV2 173 aa20.25■□□□□ 0.83
GMDS-205ENST00000486793 SYNPOQ8N3V7 929 aa20.25■□□□□ 0.83
GMDS-205ENST00000486793 KRI1Q8N9T8 703 aaKnown RBP20.25■□□□□ 0.83
GMDS-205ENST00000486793 SPPL2BQ8TCT7 592 aa20.25■□□□□ 0.83
GMDS-205ENST00000486793 EPSTI1Q96J88 318 aa20.25■□□□□ 0.83
GMDS-205ENST00000486793 CNTNAP3BQ96NU0 1288 aa20.25■□□□□ 0.83
GMDS-205ENST00000486793 GCNAQ96QF7 691 aa20.25■□□□□ 0.83
GMDS-205ENST00000486793 CNTNAP3Q9BZ76 1288 aa20.25■□□□□ 0.83
GMDS-205ENST00000486793 CCSER1Q9C0I3 900 aa20.25■□□□□ 0.83
GMDS-205ENST00000486793 SEMA4GQ9NTN9 838 aa20.25■□□□□ 0.83
GMDS-205ENST00000486793 ABI2Q9NYB9 513 aaPredicted RBP20.25■□□□□ 0.83
GMDS-205ENST00000486793 CITO14578 2027 aa20.25■□□□□ 0.83
GMDS-205ENST00000486793 KPNA7A9QM74 516 aa20.24■□□□□ 0.83
GMDS-205ENST00000486793 LRP3O75074 770 aa20.24■□□□□ 0.83
GMDS-205ENST00000486793 MCM2P49736 904 aa20.24■□□□□ 0.83
GMDS-205ENST00000486793 POU5F1Q01860 360 aaKnown RBP20.24■□□□□ 0.83
GMDS-205ENST00000486793 USP49Q70CQ1 688 aa20.24■□□□□ 0.83
GMDS-205ENST00000486793 DYMQ7RTS9 669 aa20.24■□□□□ 0.83
GMDS-205ENST00000486793 BRAPQ7Z569 592 aa20.24■□□□□ 0.83
GMDS-205ENST00000486793 TMEM150AQ86TG1 271 aa20.24■□□□□ 0.83
GMDS-205ENST00000486793 EFCAB13Q8IY85 973 aa20.24■□□□□ 0.83
GMDS-205ENST00000486793 DCP1BQ8IZD4 617 aaKnown RBP20.24■□□□□ 0.83
GMDS-205ENST00000486793 POMGNT1Q8WZA1 660 aa20.24■□□□□ 0.83
GMDS-205ENST00000486793 TMLHEQ9NVH6 421 aa20.24■□□□□ 0.83
GMDS-205ENST00000486793 TPRP12270 2363 aaKnown RBP20.24■□□□□ 0.83
GMDS-205ENST00000486793 LOC105378220A0A1B0GUY1 285 aaPredicted RBP20.23■□□□□ 0.83
GMDS-205ENST00000486793 TULP1O00294 542 aaPredicted RBP20.23■□□□□ 0.83
GMDS-205ENST00000486793 EXTL3O43909 919 aa20.23■□□□□ 0.83
GMDS-205ENST00000486793 COL4A2P08572 1712 aa20.23■□□□□ 0.83
GMDS-205ENST00000486793 HMGA1P17096 107 aaKnown RBP20.23■□□□□ 0.83
GMDS-205ENST00000486793 HOXA6P31267 233 aa20.23■□□□□ 0.83
GMDS-205ENST00000486793 CSRP2Q16527 193 aa20.23■□□□□ 0.83
GMDS-205ENST00000486793 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.23■□□□□ 0.83
GMDS-205ENST00000486793 SFR1Q86XK3 245 aa20.23■□□□□ 0.83
GMDS-205ENST00000486793 MAB21L3Q8N8X9 362 aa20.23■□□□□ 0.83
GMDS-205ENST00000486793 FAM83CQ9BQN1 747 aa20.23■□□□□ 0.83
GMDS-205ENST00000486793 CCL26Q9Y258 94 aa20.23■□□□□ 0.83
GMDS-205ENST00000486793 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.23■□□□□ 0.83
GMDS-205ENST00000486793 PCDHB5Q9Y5E4 795 aa20.23■□□□□ 0.83
GMDS-205ENST00000486793 OTOL1A6NHN0 477 aaPredicted RBP20.22■□□□□ 0.83
GMDS-205ENST00000486793 F11P03951 625 aa20.22■□□□□ 0.83
GMDS-205ENST00000486793 AVPR1AP37288 418 aa20.22■□□□□ 0.83
GMDS-205ENST00000486793 NLRP12P59046 1061 aa20.22■□□□□ 0.83
GMDS-205ENST00000486793 KCNA1Q09470 495 aa20.22■□□□□ 0.83
GMDS-205ENST00000486793 POSTNQ15063 836 aa20.22■□□□□ 0.83
GMDS-205ENST00000486793 PTPAQ15257 358 aa20.22■□□□□ 0.83
GMDS-205ENST00000486793 SV2CQ496J9 727 aa20.22■□□□□ 0.83
GMDS-205ENST00000486793 CEP68Q76N32 757 aa20.22■□□□□ 0.83
GMDS-205ENST00000486793 NETO1Q8TDF5 533 aa20.22■□□□□ 0.83
GMDS-205ENST00000486793 USP13Q92995 863 aaPredicted RBP20.22■□□□□ 0.83
GMDS-205ENST00000486793 PI4K2AQ9BTU6 479 aa20.22■□□□□ 0.83
GMDS-205ENST00000486793 STRA6Q9BX79 667 aa20.22■□□□□ 0.83
GMDS-205ENST00000486793 ZMYM5Q9UJ78 669 aa20.22■□□□□ 0.83
GMDS-205ENST00000486793 ACACBO00763 2458 aa20.21■□□□□ 0.83
GMDS-205ENST00000486793 SLC30A4O14863 429 aa20.21■□□□□ 0.83
GMDS-205ENST00000486793 GDF9O60383 454 aa20.21■□□□□ 0.83
GMDS-205ENST00000486793 PPP1R37O75864 691 aa20.21■□□□□ 0.83
GMDS-205ENST00000486793 IL18RAPO95256 599 aa20.21■□□□□ 0.83
GMDS-205ENST00000486793 PXNP49023 591 aaPredicted RBP20.21■□□□□ 0.83
GMDS-205ENST00000486793 GPR15P49685 360 aa20.21■□□□□ 0.83
GMDS-205ENST00000486793 WNT7BP56706 349 aa20.21■□□□□ 0.83
GMDS-205ENST00000486793 RUNX3Q13761 415 aa20.21■□□□□ 0.83
GMDS-205ENST00000486793 SDHAF4Q5VUM1 108 aa20.21■□□□□ 0.83
GMDS-205ENST00000486793 TXNDC8Q6A555 127 aa20.21■□□□□ 0.83
GMDS-205ENST00000486793 SCARA3Q6AZY7 606 aa20.21■□□□□ 0.83
GMDS-205ENST00000486793 TRIM68Q6AZZ1 485 aa20.21■□□□□ 0.83
GMDS-205ENST00000486793 PKN3Q6P5Z2 889 aa20.21■□□□□ 0.83
GMDS-205ENST00000486793 PRR23CQ6ZRP0 262 aa20.21■□□□□ 0.83
GMDS-205ENST00000486793 WDR5BQ86VZ2 330 aa20.21■□□□□ 0.83
GMDS-205ENST00000486793 NT5DC4Q86YG4 428 aa20.21■□□□□ 0.83
GMDS-205ENST00000486793 FAM160A2Q8N612 972 aaPredicted RBP20.21■□□□□ 0.83
GMDS-205ENST00000486793 ZSWIM2Q8NEG5 633 aa20.21■□□□□ 0.83
GMDS-205ENST00000486793 HVCN1Q96D96 273 aa20.21■□□□□ 0.83
GMDS-205ENST00000486793 FAM213AQ9BRX8 229 aa20.21■□□□□ 0.83
GMDS-205ENST00000486793 EBF3Q9H4W6 596 aa20.21■□□□□ 0.83
GMDS-205ENST00000486793 MRPL44Q9H9J2 332 aaKnown RBP20.21■□□□□ 0.83
GMDS-205ENST00000486793 HPS4Q9NQG7 708 aa20.21■□□□□ 0.83
GMDS-205ENST00000486793 TDP1Q9NUW8 608 aa20.21■□□□□ 0.83
GMDS-205ENST00000486793 TBC1D7Q9P0N9 293 aa20.21■□□□□ 0.83
GMDS-205ENST00000486793 MAGED2Q9UNF1 606 aaPredicted RBP20.21■□□□□ 0.83
GMDS-205ENST00000486793 AGAP1Q9UPQ3 857 aa20.21■□□□□ 0.83
GMDS-205ENST00000486793 CLIC4Q9Y696 253 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms