RNA–Protein interactions for RNA: ENST00000486572.1

COL1A1-207, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 836 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-207ENST00000486572 KBTBD7Q8WVZ9 684 aa19.51■□□□□ 0.71
COL1A1-207ENST00000486572 VRTNQ9H8Y1 702 aa19.51■□□□□ 0.71
COL1A1-207ENST00000486572 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.51■□□□□ 0.71
COL1A1-207ENST00000486572 DNMT3BQ9UBC3 853 aaKnown RBP19.51■□□□□ 0.71
COL1A1-207ENST00000486572 PI4K2BG5E9Z4 385 aa19.5■□□□□ 0.71
COL1A1-207ENST00000486572 GOLGA6L22H0YM25 854 aa19.5■□□□□ 0.71
COL1A1-207ENST00000486572 N4BP1O75113 896 aaKnown RBP19.5■□□□□ 0.71
COL1A1-207ENST00000486572 ALADP13716 330 aa19.5■□□□□ 0.71
COL1A1-207ENST00000486572 PTPN2P17706 415 aa19.5■□□□□ 0.71
COL1A1-207ENST00000486572 WARSP23381 471 aaKnown RBP19.5■□□□□ 0.71
COL1A1-207ENST00000486572 ACAT1P24752 427 aaKnown RBP19.5■□□□□ 0.71
COL1A1-207ENST00000486572 MCCD1P59942 119 aaPredicted RBP19.5■□□□□ 0.71
COL1A1-207ENST00000486572 INTS6LQ5JSJ4 861 aaKnown RBP19.5■□□□□ 0.71
COL1A1-207ENST00000486572 TTC9BQ8N6N2 239 aa19.5■□□□□ 0.71
COL1A1-207ENST00000486572 SPPL2BQ8TCT7 592 aa19.5■□□□□ 0.71
COL1A1-207ENST00000486572 NELFBQ8WX92 580 aa19.5■□□□□ 0.71
COL1A1-207ENST00000486572 NXF1Q9UBU9 619 aaKnown RBP19.5■□□□□ 0.71
COL1A1-207ENST00000486572 CTNND2Q9UQB3 1225 aa19.5■□□□□ 0.71
COL1A1-207ENST00000486572 SLC27A5Q9Y2P5 690 aa19.5■□□□□ 0.71
COL1A1-207ENST00000486572 BICDL2A1A5D9 508 aa19.49■□□□□ 0.71
COL1A1-207ENST00000486572 TACC1O75410 805 aa19.49■□□□□ 0.71
COL1A1-207ENST00000486572 RHOP08100 348 aa19.49■□□□□ 0.71
COL1A1-207ENST00000486572 PIK3CAP42336 1068 aa19.49■□□□□ 0.71
COL1A1-207ENST00000486572 ALDH1A3P47895 512 aa19.49■□□□□ 0.71
COL1A1-207ENST00000486572 GCLMP48507 274 aa19.49■□□□□ 0.71
COL1A1-207ENST00000486572 PPP3CAQ08209 521 aa19.49■□□□□ 0.71
COL1A1-207ENST00000486572 NFE2Q16621 373 aaPredicted RBP19.49■□□□□ 0.71
COL1A1-207ENST00000486572 SGSM1Q2NKQ1 1148 aa19.49■□□□□ 0.71
COL1A1-207ENST00000486572 ZNF667Q5HYK9 610 aa19.49■□□□□ 0.71
COL1A1-207ENST00000486572 IQCEQ6IPM2 695 aa19.49■□□□□ 0.71
COL1A1-207ENST00000486572 TTI2Q6NXR4 508 aa19.49■□□□□ 0.71
COL1A1-207ENST00000486572 FOXR2Q6PJQ5 311 aa19.49■□□□□ 0.71
COL1A1-207ENST00000486572 TAF4BQ92750 862 aa19.49■□□□□ 0.71
COL1A1-207ENST00000486572 ZNF512Q96ME7 567 aaPredicted RBP19.49■□□□□ 0.71
COL1A1-207ENST00000486572 MYADMQ96S97 322 aa19.49■□□□□ 0.71
COL1A1-207ENST00000486572 SEPT5Q99719 369 aaPredicted RBP19.49■□□□□ 0.71
COL1A1-207ENST00000486572 CORO1BQ9BR76 489 aa19.49■□□□□ 0.71
COL1A1-207ENST00000486572 NUP62CLQ9H1M0 184 aa19.49■□□□□ 0.71
COL1A1-207ENST00000486572 AVENQ9NQS1 362 aaPredicted RBP19.49■□□□□ 0.71
COL1A1-207ENST00000486572 ABI2Q9NYB9 513 aaPredicted RBP19.49■□□□□ 0.71
COL1A1-207ENST00000486572 CEP72Q9P209 647 aa19.49■□□□□ 0.71
COL1A1-207ENST00000486572 PCDHB5Q9Y5E4 795 aa19.49■□□□□ 0.71
COL1A1-207ENST00000486572 HCRTO43612 131 aa19.48■□□□□ 0.71
COL1A1-207ENST00000486572 STX10O60499 249 aa19.48■□□□□ 0.71
COL1A1-207ENST00000486572 HLA-DRAP01903 254 aa19.48■□□□□ 0.71
COL1A1-207ENST00000486572 FAM163BP0C2L3 166 aa19.48■□□□□ 0.71
COL1A1-207ENST00000486572 GTF2H1P32780 548 aa19.48■□□□□ 0.71
COL1A1-207ENST00000486572 TUFMP49411 452 aaKnown RBP19.48■□□□□ 0.71
COL1A1-207ENST00000486572 EPHB3P54753 998 aa19.48■□□□□ 0.71
COL1A1-207ENST00000486572 PAK1Q13153 545 aa19.48■□□□□ 0.71
COL1A1-207ENST00000486572 PTPN21Q16825 1174 aa19.48■□□□□ 0.71
COL1A1-207ENST00000486572 MGAT5BQ3V5L5 792 aa19.48■□□□□ 0.71
COL1A1-207ENST00000486572 CEP63Q96MT8 703 aa19.48■□□□□ 0.71
COL1A1-207ENST00000486572 PKMYT1Q99640 499 aa19.48■□□□□ 0.71
COL1A1-207ENST00000486572 SYT15Q9BQS2 421 aa19.48■□□□□ 0.71
COL1A1-207ENST00000486572 MRPL45Q9BRJ2 306 aaKnown RBP19.48■□□□□ 0.71
COL1A1-207ENST00000486572 SNX25Q9H3E2 840 aa19.48■□□□□ 0.71
COL1A1-207ENST00000486572 EPHX3Q9H6B9 360 aa19.48■□□□□ 0.71
COL1A1-207ENST00000486572 MMRN2Q9H8L6 949 aa19.48■□□□□ 0.71
COL1A1-207ENST00000486572 TMEM8AQ9HCN3 771 aa19.48■□□□□ 0.71
COL1A1-207ENST00000486572 TMLHEQ9NVH6 421 aa19.48■□□□□ 0.71
COL1A1-207ENST00000486572 EPS15L1Q9UBC2 864 aa19.48■□□□□ 0.71
COL1A1-207ENST00000486572 LIMD1Q9UGP4 676 aa19.48■□□□□ 0.71
COL1A1-207ENST00000486572 CDH9Q9ULB4 789 aa19.48■□□□□ 0.71
COL1A1-207ENST00000486572 ZFP37Q9Y6Q3 630 aaPredicted RBP19.48■□□□□ 0.71
COL1A1-207ENST00000486572 SOAT2O75908 522 aa19.47■□□□□ 0.71
COL1A1-207ENST00000486572 ASS1P00966 412 aaKnown RBP19.47■□□□□ 0.71
COL1A1-207ENST00000486572 P4HA1P13674 534 aa19.47■□□□□ 0.71
COL1A1-207ENST00000486572 LMO2P25791 158 aa19.47■□□□□ 0.71
COL1A1-207ENST00000486572 CDR1P51861 262 aa19.47■□□□□ 0.71
COL1A1-207ENST00000486572 DCAF17Q5H9S7 520 aaPredicted RBP19.47■□□□□ 0.71
COL1A1-207ENST00000486572 KRT39Q6A163 491 aa19.47■□□□□ 0.71
COL1A1-207ENST00000486572 LEMD2Q8NC56 503 aa19.47■□□□□ 0.71
COL1A1-207ENST00000486572 OR6B3Q8NGW1 331 aa19.47■□□□□ 0.71
COL1A1-207ENST00000486572 ITFG1Q8TB96 612 aa19.47■□□□□ 0.71
COL1A1-207ENST00000486572 TAS1R2Q8TE23 839 aa19.47■□□□□ 0.71
COL1A1-207ENST00000486572 DUSP9Q99956 384 aaKnown RBP19.47■□□□□ 0.71
COL1A1-207ENST00000486572 IMPG2Q9BZV3 1241 aa19.47■□□□□ 0.71
COL1A1-207ENST00000486572 DNAJC25Q9H1X3 360 aa19.47■□□□□ 0.71
COL1A1-207ENST00000486572 SMYD3Q9H7B4 428 aa19.47■□□□□ 0.71
COL1A1-207ENST00000486572 ABCB6Q9NP58 842 aa19.47■□□□□ 0.71
COL1A1-207ENST00000486572 ASAH2Q9NR71 780 aa19.47■□□□□ 0.71
COL1A1-207ENST00000486572 ARMCX3Q9UH62 379 aaPredicted RBP19.47■□□□□ 0.71
COL1A1-207ENST00000486572 GTF3C4Q9UKN8 822 aa19.47■□□□□ 0.71
COL1A1-207ENST00000486572 CDH7Q9ULB5 785 aa19.47■□□□□ 0.71
COL1A1-207ENST00000486572 MRPS23Q9Y3D9 190 aaKnown RBP19.47■□□□□ 0.71
COL1A1-207ENST00000486572 HAPLN1P10915 354 aaPredicted RBP19.46■□□□□ 0.71
COL1A1-207ENST00000486572 LAMP2P13473 410 aa19.46■□□□□ 0.71
COL1A1-207ENST00000486572 GNL1P36915 607 aaPredicted RBP19.46■□□□□ 0.71
COL1A1-207ENST00000486572 MXI1P50539 228 aa19.46■□□□□ 0.71
COL1A1-207ENST00000486572 PSMC1P62191 440 aaKnown RBP19.46■□□□□ 0.71
COL1A1-207ENST00000486572 MAPRE1Q15691 268 aaKnown RBP19.46■□□□□ 0.71
COL1A1-207ENST00000486572 SLC5A9Q2M3M2 681 aa19.46■□□□□ 0.71
COL1A1-207ENST00000486572 CYP4A22Q5TCH4 519 aa19.46■□□□□ 0.71
COL1A1-207ENST00000486572 TCERG1LQ5VWI1 586 aa19.46■□□□□ 0.71
COL1A1-207ENST00000486572 SCARA5Q6ZMJ2 495 aa19.46■□□□□ 0.71
COL1A1-207ENST00000486572 PDZD4Q76G19 769 aaPredicted RBP19.46■□□□□ 0.71
COL1A1-207ENST00000486572 FGF13Q92913 245 aa19.46■□□□□ 0.71
COL1A1-207ENST00000486572 ELMO3Q96BJ8 720 aa19.46■□□□□ 0.71
COL1A1-207ENST00000486572 METTL14Q9HCE5 456 aaKnown RBP19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms