RNA–Protein interactions for RNA: ENST00000486427.1

LTN1-206, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene LTN1, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-206ENST00000486427 SIMC1Q8NDZ2 872 aa6.69□□□□□ -1.34
LTN1-206ENST00000486427 TOR1AIP2Q8NFQ8 470 aa6.69□□□□□ -1.34
LTN1-206ENST00000486427 ACTRT2Q8TDY3 377 aa6.69□□□□□ -1.34
LTN1-206ENST00000486427 DDX17Q92841 729 aaKnown RBP6.69□□□□□ -1.34
LTN1-206ENST00000486427 PDLIM2Q96JY6 352 aa6.69□□□□□ -1.34
LTN1-206ENST00000486427 ZNHIT2Q9UHR6 403 aa6.69□□□□□ -1.34
LTN1-206ENST00000486427 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.69□□□□□ -1.34
LTN1-206ENST00000486427 SPATA31A3Q5VYP0 1347 aa6.69□□□□□ -1.34
LTN1-206ENST00000486427 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.68□□□□□ -1.34
LTN1-206ENST00000486427 F5H697 171 aa6.68□□□□□ -1.34
LTN1-206ENST00000486427 CTNND1O60716 968 aaKnown RBP6.68□□□□□ -1.34
LTN1-206ENST00000486427 NUDT3O95989 172 aa6.68□□□□□ -1.34
LTN1-206ENST00000486427 PTH2RP49190 550 aa6.68□□□□□ -1.34
LTN1-206ENST00000486427 AGFG1P52594 562 aaKnown RBP6.68□□□□□ -1.34
LTN1-206ENST00000486427 FAM160B1Q5W0V3 765 aa6.68□□□□□ -1.34
LTN1-206ENST00000486427 SLC9A6Q92581 669 aa6.68□□□□□ -1.34
LTN1-206ENST00000486427 TSR2Q969E8 191 aaKnown RBP6.68□□□□□ -1.34
LTN1-206ENST00000486427 FBXL20Q96IG2 436 aa6.68□□□□□ -1.34
LTN1-206ENST00000486427 P2RX7Q99572 595 aaKnown RBP6.68□□□□□ -1.34
LTN1-206ENST00000486427 B3GNT5Q9BYG0 378 aa6.68□□□□□ -1.34
LTN1-206ENST00000486427 ZMAT3Q9HA38 289 aaKnown RBP6.68□□□□□ -1.34
LTN1-206ENST00000486427 LRIT1Q9P2V4 623 aa6.68□□□□□ -1.34
LTN1-206ENST00000486427 HESX1Q9UBX0 185 aa6.68□□□□□ -1.34
LTN1-206ENST00000486427 RAD54BQ9Y620 910 aa6.68□□□□□ -1.34
LTN1-206ENST00000486427 ZAR1LA6NP61 321 aa6.67□□□□□ -1.34
LTN1-206ENST00000486427 VWC2LB2RUY7 222 aa6.67□□□□□ -1.34
LTN1-206ENST00000486427 DCLK1O15075 740 aa6.67□□□□□ -1.34
LTN1-206ENST00000486427 NPR1P16066 1061 aa6.67□□□□□ -1.34
LTN1-206ENST00000486427 GCLCP48506 637 aaPredicted RBP6.67□□□□□ -1.34
LTN1-206ENST00000486427 KCNJ5P48544 419 aa6.67□□□□□ -1.34
LTN1-206ENST00000486427 RARRES1P49788 294 aa6.67□□□□□ -1.34
LTN1-206ENST00000486427 ZNF134P52741 427 aa6.67□□□□□ -1.34
LTN1-206ENST00000486427 MLC1Q15049 377 aa6.67□□□□□ -1.34
LTN1-206ENST00000486427 RBM20Q5T481 1227 aaKnown RBP6.67□□□□□ -1.34
LTN1-206ENST00000486427 SWSAP1Q6NVH7 229 aa6.67□□□□□ -1.34
LTN1-206ENST00000486427 NPNTQ6UXI9 565 aa6.67□□□□□ -1.34
LTN1-206ENST00000486427 TFAP2BQ92481 460 aa6.67□□□□□ -1.34
LTN1-206ENST00000486427 SLC46A1Q96NT5 459 aa6.67□□□□□ -1.34
LTN1-206ENST00000486427 HEPHQ9BQS7 1158 aa6.67□□□□□ -1.34
LTN1-206ENST00000486427 AMBRA1Q9C0C7 1298 aa6.67□□□□□ -1.34
LTN1-206ENST00000486427 ATP6V0A4Q9HBG4 840 aa6.67□□□□□ -1.34
LTN1-206ENST00000486427 TCEAL9Q9UHQ7 104 aa6.67□□□□□ -1.34
LTN1-206ENST00000486427 A6NNZ2 444 aa6.66□□□□□ -1.34
LTN1-206ENST00000486427 ADM5C9JUS6 153 aa6.66□□□□□ -1.34
LTN1-206ENST00000486427 MPPED1O15442 326 aa6.66□□□□□ -1.34
LTN1-206ENST00000486427 RHOP08100 348 aa6.66□□□□□ -1.34
LTN1-206ENST00000486427 CHRM2P08172 466 aa6.66□□□□□ -1.34
LTN1-206ENST00000486427 ITGALP20701 1170 aa6.66□□□□□ -1.34
LTN1-206ENST00000486427 MAPK10P53779 464 aa6.66□□□□□ -1.34
LTN1-206ENST00000486427 NANOS3P60323 173 aaKnown RBP6.66□□□□□ -1.34
LTN1-206ENST00000486427 MINDY4Q4G0A6 757 aa6.66□□□□□ -1.34
LTN1-206ENST00000486427 ANO6Q4KMQ2 910 aa6.66□□□□□ -1.34
LTN1-206ENST00000486427 ZNF362Q5T0B9 420 aaPredicted RBP6.66□□□□□ -1.34
LTN1-206ENST00000486427 VPS53Q5VIR6 699 aa6.66□□□□□ -1.34
LTN1-206ENST00000486427 B3GALNT2Q8NCR0 500 aa6.66□□□□□ -1.34
LTN1-206ENST00000486427 PGBD1Q96JS3 809 aa6.66□□□□□ -1.34
LTN1-206ENST00000486427 OSBPL9Q96SU4 736 aa6.66□□□□□ -1.34
LTN1-206ENST00000486427 TTYH3Q9C0H2 523 aa6.66□□□□□ -1.34
LTN1-206ENST00000486427 RIOX1Q9H6W3 641 aa6.66□□□□□ -1.34
LTN1-206ENST00000486427 KLHL42Q9P2K6 505 aa6.66□□□□□ -1.34
LTN1-206ENST00000486427 DDX20Q9UHI6 824 aaKnown RBP6.66□□□□□ -1.34
LTN1-206ENST00000486427 MED16Q9Y2X0 877 aa6.66□□□□□ -1.34
LTN1-206ENST00000486427 WDR27A2RRH5 827 aa6.65□□□□□ -1.34
LTN1-206ENST00000486427 TRIAP1O43715 76 aa6.65□□□□□ -1.34
LTN1-206ENST00000486427 SOAT2O75908 522 aa6.65□□□□□ -1.34
LTN1-206ENST00000486427 GRPP07492 148 aa6.65□□□□□ -1.34
LTN1-206ENST00000486427 ELFN1P0C7U0 828 aa6.65□□□□□ -1.34
LTN1-206ENST00000486427 U2AF1L5P0DN76 240 aaPredicted RBP6.65□□□□□ -1.34
LTN1-206ENST00000486427 KITP10721 976 aa6.65□□□□□ -1.34
LTN1-206ENST00000486427 U2AF1Q01081 240 aaKnown RBP eCLIP6.65□□□□□ -1.34
LTN1-206ENST00000486427 PTPRRQ15256 657 aa6.65□□□□□ -1.34
LTN1-206ENST00000486427 TXNRD1Q16881 649 aa6.65□□□□□ -1.34
LTN1-206ENST00000486427 TMEM108Q6UXF1 575 aa6.65□□□□□ -1.34
LTN1-206ENST00000486427 PEG10Q86TG7 708 aaKnown RBP6.65□□□□□ -1.34
LTN1-206ENST00000486427 DNAJC10Q8IXB1 793 aa6.65□□□□□ -1.34
LTN1-206ENST00000486427 FAM109AQ8N4B1 249 aa6.65□□□□□ -1.34
LTN1-206ENST00000486427 SPATA5L1Q9BVQ7 753 aa6.65□□□□□ -1.34
LTN1-206ENST00000486427 TPSD1Q9BZJ3 242 aa6.65□□□□□ -1.34
LTN1-206ENST00000486427 CNNM1Q9NRU3 951 aa6.65□□□□□ -1.34
LTN1-206ENST00000486427 PLEKHM1Q9Y4G2 1056 aa6.65□□□□□ -1.34
LTN1-206ENST00000486427 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.65□□□□□ -1.34
LTN1-206ENST00000486427 ADGRA2Q96PE1 1338 aa6.65□□□□□ -1.35
LTN1-206ENST00000486427 CD6P30203 668 aa6.64□□□□□ -1.35
LTN1-206ENST00000486427 ARFIP2P53365 341 aa6.64□□□□□ -1.35
LTN1-206ENST00000486427 ITIH3Q06033 890 aa6.64□□□□□ -1.35
LTN1-206ENST00000486427 LLGL1Q15334 1064 aa6.64□□□□□ -1.35
LTN1-206ENST00000486427 ERCC6LQ2NKX8 1250 aa6.64□□□□□ -1.35
LTN1-206ENST00000486427 LONRF3Q496Y0 759 aa6.64□□□□□ -1.35
LTN1-206ENST00000486427 ARHGAP29Q52LW3 1261 aa6.64□□□□□ -1.35
LTN1-206ENST00000486427 KAZNQ674X7 775 aa6.64□□□□□ -1.35
LTN1-206ENST00000486427 KIAA0319LQ8IZA0 1049 aa6.64□□□□□ -1.35
LTN1-206ENST00000486427 MYO1HQ8N1T3 1032 aa6.64□□□□□ -1.35
LTN1-206ENST00000486427 ACTRT3Q9BYD9 372 aa6.64□□□□□ -1.35
LTN1-206ENST00000486427 TRIM54Q9BYV2 358 aa6.64□□□□□ -1.35
LTN1-206ENST00000486427 TMEM60Q9H2L4 133 aa6.64□□□□□ -1.35
LTN1-206ENST00000486427 R3HDMLQ9H3Y0 253 aa6.64□□□□□ -1.35
LTN1-206ENST00000486427 PIH1D1Q9NWS0 290 aaKnown RBP6.64□□□□□ -1.35
LTN1-206ENST00000486427 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.64□□□□□ -1.35
LTN1-206ENST00000486427 TLK1Q9UKI8 766 aa6.64□□□□□ -1.35
LTN1-206ENST00000486427 A0A1W2PPL8 197 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms