RNA–Protein interactions for RNA: ENST00000486028.1

HMG20B-211, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-211ENST00000486028 TMEM209Q96SK2 561 aa13.35□□□□□ -0.27
HMG20B-211ENST00000486028 ACBD6Q9BR61 282 aa13.35□□□□□ -0.27
HMG20B-211ENST00000486028 NUP62CLQ9H1M0 184 aa13.35□□□□□ -0.27
HMG20B-211ENST00000486028 DDX43Q9NXZ2 648 aaKnown RBP13.35□□□□□ -0.27
HMG20B-211ENST00000486028 INSL5Q9Y5Q6 135 aa13.35□□□□□ -0.27
HMG20B-211ENST00000486028 CLUHO75153 1309 aa13.35□□□□□ -0.27
HMG20B-211ENST00000486028 TRIM49BA6NDI0 452 aa13.34□□□□□ -0.27
HMG20B-211ENST00000486028 GABRDO14764 452 aa13.34□□□□□ -0.27
HMG20B-211ENST00000486028 CLSTN1O94985 981 aa13.34□□□□□ -0.27
HMG20B-211ENST00000486028 VNN1O95497 513 aa13.34□□□□□ -0.27
HMG20B-211ENST00000486028 TRIM49P0CI25 452 aa13.34□□□□□ -0.27
HMG20B-211ENST00000486028 TRIM49CP0CI26 452 aa13.34□□□□□ -0.27
HMG20B-211ENST00000486028 P4HA1P13674 534 aa13.34□□□□□ -0.27
HMG20B-211ENST00000486028 SP100P23497 879 aaPredicted RBP13.34□□□□□ -0.27
HMG20B-211ENST00000486028 FSHRP23945 695 aa13.34□□□□□ -0.27
HMG20B-211ENST00000486028 ALDH1A3P47895 512 aa13.34□□□□□ -0.27
HMG20B-211ENST00000486028 MCCD1P59942 119 aaPredicted RBP13.34□□□□□ -0.27
HMG20B-211ENST00000486028 PLD1Q13393 1074 aa13.34□□□□□ -0.27
HMG20B-211ENST00000486028 ZNF699Q32M78 642 aa13.34□□□□□ -0.27
HMG20B-211ENST00000486028 TTI2Q6NXR4 508 aa13.34□□□□□ -0.27
HMG20B-211ENST00000486028 RNF135Q8IUD6 432 aa13.34□□□□□ -0.27
HMG20B-211ENST00000486028 ELMOD1Q8N336 334 aa13.34□□□□□ -0.27
HMG20B-211ENST00000486028 ATAD1Q8NBU5 361 aa13.34□□□□□ -0.27
HMG20B-211ENST00000486028 C2orf15Q8WU43 125 aaKnown RBP13.34□□□□□ -0.27
HMG20B-211ENST00000486028 TAF4BQ92750 862 aa13.34□□□□□ -0.27
HMG20B-211ENST00000486028 XYLT2Q9H1B5 865 aa13.34□□□□□ -0.27
HMG20B-211ENST00000486028 SNX25Q9H3E2 840 aa13.34□□□□□ -0.27
HMG20B-211ENST00000486028 VRTNQ9H8Y1 702 aa13.34□□□□□ -0.27
HMG20B-211ENST00000486028 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.34□□□□□ -0.27
HMG20B-211ENST00000486028 HSFX1Q9UBD0 423 aa13.34□□□□□ -0.27
HMG20B-211ENST00000486028 NXF1Q9UBU9 619 aaKnown RBP13.34□□□□□ -0.27
HMG20B-211ENST00000486028 MTMR11A4FU01 709 aa13.33□□□□□ -0.28
HMG20B-211ENST00000486028 C2CD4DB7Z1M9 353 aa13.33□□□□□ -0.28
HMG20B-211ENST00000486028 TACC1O75410 805 aa13.33□□□□□ -0.28
HMG20B-211ENST00000486028 PTPN2P17706 415 aa13.33□□□□□ -0.28
HMG20B-211ENST00000486028 WARSP23381 471 aaKnown RBP13.33□□□□□ -0.28
HMG20B-211ENST00000486028 GNL1P36915 607 aaPredicted RBP13.33□□□□□ -0.28
HMG20B-211ENST00000486028 PIK3CAP42336 1068 aa13.33□□□□□ -0.28
HMG20B-211ENST00000486028 GCLMP48507 274 aa13.33□□□□□ -0.28
HMG20B-211ENST00000486028 TUFMP49411 452 aaKnown RBP13.33□□□□□ -0.28
HMG20B-211ENST00000486028 EPHB3P54753 998 aa13.33□□□□□ -0.28
HMG20B-211ENST00000486028 PPP3CAQ08209 521 aa13.33□□□□□ -0.28
HMG20B-211ENST00000486028 TWF1Q12792 350 aa13.33□□□□□ -0.28
HMG20B-211ENST00000486028 PAK1Q13153 545 aa13.33□□□□□ -0.28
HMG20B-211ENST00000486028 NFE2Q16621 373 aaPredicted RBP13.33□□□□□ -0.28
HMG20B-211ENST00000486028 ZNF667Q5HYK9 610 aa13.33□□□□□ -0.28
HMG20B-211ENST00000486028 IQCEQ6IPM2 695 aa13.33□□□□□ -0.28
HMG20B-211ENST00000486028 FILIP1Q7Z7B0 1213 aa13.33□□□□□ -0.28
HMG20B-211ENST00000486028 LRRTM3Q86VH5 581 aa13.33□□□□□ -0.28
HMG20B-211ENST00000486028 ZDHHC14Q8IZN3 488 aa13.33□□□□□ -0.28
HMG20B-211ENST00000486028 MLKLQ8NB16 471 aa13.33□□□□□ -0.28
HMG20B-211ENST00000486028 ZNF512Q96ME7 567 aaPredicted RBP13.33□□□□□ -0.28
HMG20B-211ENST00000486028 DUSP9Q99956 384 aaKnown RBP13.33□□□□□ -0.28
HMG20B-211ENST00000486028 METTL14Q9HCE5 456 aaKnown RBP13.33□□□□□ -0.28
HMG20B-211ENST00000486028 TMEM8AQ9HCN3 771 aa13.33□□□□□ -0.28
HMG20B-211ENST00000486028 ARMCX3Q9UH62 379 aaPredicted RBP13.33□□□□□ -0.28
HMG20B-211ENST00000486028 CTNND2Q9UQB3 1225 aa13.33□□□□□ -0.28
HMG20B-211ENST00000486028 SLC27A5Q9Y2P5 690 aa13.33□□□□□ -0.28
HMG20B-211ENST00000486028 PCDHB5Q9Y5E4 795 aa13.33□□□□□ -0.28
HMG20B-211ENST00000486028 VNN2O95498 520 aa13.32□□□□□ -0.28
HMG20B-211ENST00000486028 FGFR1OPO95684 399 aaKnown RBP13.32□□□□□ -0.28
HMG20B-211ENST00000486028 HLA-DRAP01903 254 aa13.32□□□□□ -0.28
HMG20B-211ENST00000486028 PDGFRBP09619 1106 aa13.32□□□□□ -0.28
HMG20B-211ENST00000486028 ALADP13716 330 aa13.32□□□□□ -0.28
HMG20B-211ENST00000486028 ACAT1P24752 427 aaKnown RBP13.32□□□□□ -0.28
HMG20B-211ENST00000486028 GBP2P32456 591 aaPredicted RBP13.32□□□□□ -0.28
HMG20B-211ENST00000486028 NTHL1P78549 312 aa13.32□□□□□ -0.28
HMG20B-211ENST00000486028 MAPRE1Q15691 268 aaKnown RBP13.32□□□□□ -0.28
HMG20B-211ENST00000486028 MGAT5BQ3V5L5 792 aa13.32□□□□□ -0.28
HMG20B-211ENST00000486028 PABPC1LQ4VXU2 614 aaKnown RBP13.32□□□□□ -0.28
HMG20B-211ENST00000486028 INTS6LQ5JSJ4 861 aaKnown RBP13.32□□□□□ -0.28
HMG20B-211ENST00000486028 CYP4A22Q5TCH4 519 aa13.32□□□□□ -0.28
HMG20B-211ENST00000486028 TCERG1LQ5VWI1 586 aa13.32□□□□□ -0.28
HMG20B-211ENST00000486028 KRT39Q6A163 491 aa13.32□□□□□ -0.28
HMG20B-211ENST00000486028 FRMD5Q7Z6J6 570 aa13.32□□□□□ -0.28
HMG20B-211ENST00000486028 OSTM1Q86WC4 334 aa13.32□□□□□ -0.28
HMG20B-211ENST00000486028 CCDC150Q8NCX0 1101 aa13.32□□□□□ -0.28
HMG20B-211ENST00000486028 OR6B3Q8NGW1 331 aa13.32□□□□□ -0.28
HMG20B-211ENST00000486028 SPPL2BQ8TCT7 592 aa13.32□□□□□ -0.28
HMG20B-211ENST00000486028 KBTBD7Q8WVZ9 684 aa13.32□□□□□ -0.28
HMG20B-211ENST00000486028 CORO1BQ9BR76 489 aa13.32□□□□□ -0.28
HMG20B-211ENST00000486028 IMPG2Q9BZV3 1241 aa13.32□□□□□ -0.28
HMG20B-211ENST00000486028 MMRN2Q9H8L6 949 aa13.32□□□□□ -0.28
HMG20B-211ENST00000486028 HCFC1R1Q9NWW0 138 aa13.32□□□□□ -0.28
HMG20B-211ENST00000486028 ABI2Q9NYB9 513 aaPredicted RBP13.32□□□□□ -0.28
HMG20B-211ENST00000486028 DNMT3BQ9UBC3 853 aaKnown RBP13.32□□□□□ -0.28
HMG20B-211ENST00000486028 CDH9Q9ULB4 789 aa13.32□□□□□ -0.28
HMG20B-211ENST00000486028 YIPF1Q9Y548 306 aa13.32□□□□□ -0.28
HMG20B-211ENST00000486028 ZNF197O14709 1029 aa13.31□□□□□ -0.28
HMG20B-211ENST00000486028 GNA14O95837 355 aa13.31□□□□□ -0.28
HMG20B-211ENST00000486028 ASS1P00966 412 aaKnown RBP13.31□□□□□ -0.28
HMG20B-211ENST00000486028 RHOP08100 348 aa13.31□□□□□ -0.28
HMG20B-211ENST00000486028 LMO2P25791 158 aa13.31□□□□□ -0.28
HMG20B-211ENST00000486028 PSEN1P49768 467 aa13.31□□□□□ -0.28
HMG20B-211ENST00000486028 STX17P56962 302 aa13.31□□□□□ -0.28
HMG20B-211ENST00000486028 CCDC40Q4G0X9 1142 aa13.31□□□□□ -0.28
HMG20B-211ENST00000486028 DCAF17Q5H9S7 520 aaPredicted RBP13.31□□□□□ -0.28
HMG20B-211ENST00000486028 GET4Q7L5D6 327 aaPredicted RBP13.31□□□□□ -0.28
HMG20B-211ENST00000486028 LEMD2Q8NC56 503 aa13.31□□□□□ -0.28
HMG20B-211ENST00000486028 GPT2Q8TD30 523 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms