RNA–Protein interactions for RNA: ENST00000486016.1

GCFC2-209, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 3

Gene GCFC2, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-209ENST00000486016 SLC10A2Q12908 348 aaPredicted RBP5.22□□□□□ -1.57
GCFC2-209ENST00000486016 EIF2B5Q13144 721 aaKnown RBP5.22□□□□□ -1.57
GCFC2-209ENST00000486016 BOP1Q14137 746 aaKnown RBP5.22□□□□□ -1.57
GCFC2-209ENST00000486016 UAP1L1Q3KQV9 507 aa5.22□□□□□ -1.57
GCFC2-209ENST00000486016 RBM20Q5T481 1227 aaKnown RBP5.22□□□□□ -1.57
GCFC2-209ENST00000486016 VPS53Q5VIR6 699 aa5.22□□□□□ -1.57
GCFC2-209ENST00000486016 EFCAB2Q5VUJ9 269 aa5.22□□□□□ -1.57
GCFC2-209ENST00000486016 C11orf87Q6NUJ2 197 aa5.22□□□□□ -1.57
GCFC2-209ENST00000486016 CAMKK1Q8N5S9 505 aa5.22□□□□□ -1.57
GCFC2-209ENST00000486016 CNPPD1Q9BV87 410 aa5.22□□□□□ -1.57
GCFC2-209ENST00000486016 PADI4Q9UM07 663 aa5.22□□□□□ -1.57
GCFC2-209ENST00000486016 ZNF804BA4D1E1 1349 aa5.22□□□□□ -1.57
GCFC2-209ENST00000486016 KIF20AO95235 890 aa5.21□□□□□ -1.58
GCFC2-209ENST00000486016 HNRNPCP07910 306 aaKnown RBP eCLIP5.21□□□□□ -1.58
GCFC2-209ENST00000486016 NHLRC4P0CG21 123 aaPredicted RBP5.21□□□□□ -1.58
GCFC2-209ENST00000486016 PIK3CGP48736 1102 aa5.21□□□□□ -1.58
GCFC2-209ENST00000486016 AMPD3Q01432 767 aa5.21□□□□□ -1.58
GCFC2-209ENST00000486016 ITKQ08881 620 aa5.21□□□□□ -1.58
GCFC2-209ENST00000486016 BMPR2Q13873 1038 aa5.21□□□□□ -1.58
GCFC2-209ENST00000486016 TBCCQ15814 346 aa5.21□□□□□ -1.58
GCFC2-209ENST00000486016 FAM153CQ494X1 144 aa5.21□□□□□ -1.58
GCFC2-209ENST00000486016 ZNF66Q6ZN08 573 aa5.21□□□□□ -1.58
GCFC2-209ENST00000486016 PRR18Q8N4B5 295 aa5.21□□□□□ -1.58
GCFC2-209ENST00000486016 VGLL2Q8N8G2 317 aa5.21□□□□□ -1.58
GCFC2-209ENST00000486016 C3orf20Q8ND61 904 aa5.21□□□□□ -1.58
GCFC2-209ENST00000486016 FAM136AQ96C01 138 aa5.21□□□□□ -1.58
GCFC2-209ENST00000486016 GNL3LQ9NVN8 582 aaKnown RBP5.21□□□□□ -1.58
GCFC2-209ENST00000486016 NR2E3Q9Y5X4 410 aa5.21□□□□□ -1.58
GCFC2-209ENST00000486016 TP73O15350 636 aa5.2□□□□□ -1.58
GCFC2-209ENST00000486016 GNAI3P08754 354 aa5.2□□□□□ -1.58
GCFC2-209ENST00000486016 PHKA1P46020 1223 aa5.2□□□□□ -1.58
GCFC2-209ENST00000486016 HK3P52790 923 aa5.2□□□□□ -1.58
GCFC2-209ENST00000486016 GNAI1P63096 354 aa5.2□□□□□ -1.58
GCFC2-209ENST00000486016 EZH2Q15910 746 aaKnown RBP5.2□□□□□ -1.58
GCFC2-209ENST00000486016 PROSER3Q2NL68 480 aa5.2□□□□□ -1.58
GCFC2-209ENST00000486016 ZNF551Q7Z340 670 aaPredicted RBP5.2□□□□□ -1.58
GCFC2-209ENST00000486016 USP37Q86T82 979 aa5.2□□□□□ -1.58
GCFC2-209ENST00000486016 PRPF38AQ8NAV1 312 aaKnown RBP5.2□□□□□ -1.58
GCFC2-209ENST00000486016 MTMR8Q96EF0 704 aa5.2□□□□□ -1.58
GCFC2-209ENST00000486016 TINAGL1Q9GZM7 467 aaPredicted RBP5.2□□□□□ -1.58
GCFC2-209ENST00000486016 MRPL46Q9H2W6 279 aaKnown RBP5.2□□□□□ -1.58
GCFC2-209ENST00000486016 ZDHHC8Q9ULC8 765 aa5.2□□□□□ -1.58
GCFC2-209ENST00000486016 POLHQ9Y253 713 aa5.2□□□□□ -1.58
GCFC2-209ENST00000486016 PCDHA3Q9Y5H8 950 aa5.2□□□□□ -1.58
GCFC2-209ENST00000486016 VPS4BO75351 444 aa5.19□□□□□ -1.58
GCFC2-209ENST00000486016 ARIH2O95376 493 aa5.19□□□□□ -1.58
GCFC2-209ENST00000486016 PDHA1P08559 390 aa5.19□□□□□ -1.58
GCFC2-209ENST00000486016 EBLN1P0CF75 366 aa5.19□□□□□ -1.58
GCFC2-209ENST00000486016 PRR35P0CG20 571 aa5.19□□□□□ -1.58
GCFC2-209ENST00000486016 CHRM3P20309 590 aa5.19□□□□□ -1.58
GCFC2-209ENST00000486016 SMARCA1P28370 1054 aa5.19□□□□□ -1.58
GCFC2-209ENST00000486016 CD6P30203 668 aa5.19□□□□□ -1.58
GCFC2-209ENST00000486016 GCLCP48506 637 aaPredicted RBP5.19□□□□□ -1.58
GCFC2-209ENST00000486016 SRSF7Q16629 238 aaKnown RBP eCLIP5.19□□□□□ -1.58
GCFC2-209ENST00000486016 PLAC9Q5JTB6 97 aa5.19□□□□□ -1.58
GCFC2-209ENST00000486016 SUMO4Q6EEV6 95 aa5.19□□□□□ -1.58
GCFC2-209ENST00000486016 DTX2Q86UW9 622 aa5.19□□□□□ -1.58
GCFC2-209ENST00000486016 ZNF366Q8N895 744 aa5.19□□□□□ -1.58
GCFC2-209ENST00000486016 KLHDC4Q8TBB5 520 aa5.19□□□□□ -1.58
GCFC2-209ENST00000486016 ARHGEF3Q9NR81 526 aa5.19□□□□□ -1.58
GCFC2-209ENST00000486016 BTBD3Q9Y2F9 522 aa5.19□□□□□ -1.58
GCFC2-209ENST00000486016 RAD54BQ9Y620 910 aa5.19□□□□□ -1.58
GCFC2-209ENST00000486016 SBNO2Q9Y2G9 1366 aa5.18□□□□□ -1.58
GCFC2-209ENST00000486016 FNDC1Q4ZHG4 1894 aaPredicted RBP5.18□□□□□ -1.58
GCFC2-209ENST00000486016 TISP43B9A030 160 aa5.18□□□□□ -1.58
GCFC2-209ENST00000486016 PPM1DO15297 605 aa5.18□□□□□ -1.58
GCFC2-209ENST00000486016 ITGALP20701 1170 aa5.18□□□□□ -1.58
GCFC2-209ENST00000486016 PDCP20941 246 aa5.18□□□□□ -1.58
GCFC2-209ENST00000486016 NOGQ13253 232 aa5.18□□□□□ -1.58
GCFC2-209ENST00000486016 GRM1Q13255 1194 aa5.18□□□□□ -1.58
GCFC2-209ENST00000486016 PTPN21Q16825 1174 aa5.18□□□□□ -1.58
GCFC2-209ENST00000486016 SLC44A4Q53GD3 710 aa5.18□□□□□ -1.58
GCFC2-209ENST00000486016 MTX3Q5HYI7 312 aa5.18□□□□□ -1.58
GCFC2-209ENST00000486016 ZNF626Q68DY1 528 aa5.18□□□□□ -1.58
GCFC2-209ENST00000486016 PNMA8AQ86V59 439 aaPredicted RBP5.18□□□□□ -1.58
GCFC2-209ENST00000486016 PPP1R3BQ86XI6 285 aa5.18□□□□□ -1.58
GCFC2-209ENST00000486016 SEMA4CQ9C0C4 833 aa5.18□□□□□ -1.58
GCFC2-209ENST00000486016 SIK2Q9H0K1 926 aa5.18□□□□□ -1.58
GCFC2-209ENST00000486016 WDCPQ9H6R7 721 aa5.18□□□□□ -1.58
GCFC2-209ENST00000486016 WASHC2CQ9Y4E1 1318 aa5.18□□□□□ -1.58
GCFC2-209ENST00000486016 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.17□□□□□ -1.58
GCFC2-209ENST00000486016 SLC16A6O15403 523 aa5.17□□□□□ -1.58
GCFC2-209ENST00000486016 FAM163BP0C2L3 166 aa5.17□□□□□ -1.58
GCFC2-209ENST00000486016 ZNF134P52741 427 aa5.17□□□□□ -1.58
GCFC2-209ENST00000486016 TMEM119Q4V9L6 283 aa5.17□□□□□ -1.58
GCFC2-209ENST00000486016 CEP85Q6P2H3 762 aa5.17□□□□□ -1.58
GCFC2-209ENST00000486016 ANKRD16Q6P6B7 361 aa5.17□□□□□ -1.58
GCFC2-209ENST00000486016 MAVSQ7Z434 540 aa5.17□□□□□ -1.58
GCFC2-209ENST00000486016 HEATR3Q7Z4Q2 680 aa5.17□□□□□ -1.58
GCFC2-209ENST00000486016 NEK8Q86SG6 692 aa5.17□□□□□ -1.58
GCFC2-209ENST00000486016 ATRIPQ8WXE1 791 aa5.17□□□□□ -1.58
GCFC2-209ENST00000486016 TBC1D5Q92609 795 aa5.17□□□□□ -1.58
GCFC2-209ENST00000486016 NELL2Q99435 816 aa5.17□□□□□ -1.58
GCFC2-209ENST00000486016 SLAMF7Q9NQ25 335 aa5.17□□□□□ -1.58
GCFC2-209ENST00000486016 DLL3Q9NYJ7 618 aa5.17□□□□□ -1.58
GCFC2-209ENST00000486016 H0YIZ8 118 aa5.16□□□□□ -1.58
GCFC2-209ENST00000486016 MYO1FO00160 1098 aa5.16□□□□□ -1.58
GCFC2-209ENST00000486016 DCLK1O15075 740 aa5.16□□□□□ -1.58
GCFC2-209ENST00000486016 JTBO76095 146 aa5.16□□□□□ -1.58
GCFC2-209ENST00000486016 NXPH3O95157 252 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms