RNA–Protein interactions for RNA: ENST00000485792.1

CUX1-208, Transcript of cut like homeobox 1, humanhuman

TSL 5

Gene CUX1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-208ENST00000485792 DLL1O00548 723 aa6.19□□□□□ -1.42
CUX1-208ENST00000485792 PODXLO00592 558 aa6.19□□□□□ -1.42
CUX1-208ENST00000485792 PDXKO00764 312 aa6.19□□□□□ -1.42
CUX1-208ENST00000485792 C2CD2LO14523 706 aa6.19□□□□□ -1.42
CUX1-208ENST00000485792 AXIN1O15169 862 aa6.19□□□□□ -1.42
CUX1-208ENST00000485792 MAPK13O15264 365 aa6.19□□□□□ -1.42
CUX1-208ENST00000485792 ST8SIA5O15466 376 aa6.19□□□□□ -1.42
CUX1-208ENST00000485792 TGM5O43548 720 aa6.19□□□□□ -1.42
CUX1-208ENST00000485792 TADA2AO75478 443 aa6.19□□□□□ -1.42
CUX1-208ENST00000485792 B3GAT3O94766 335 aa6.19□□□□□ -1.42
CUX1-208ENST00000485792 IL18RAPO95256 599 aa6.19□□□□□ -1.42
CUX1-208ENST00000485792 GCNT3O95395 438 aa6.19□□□□□ -1.42
CUX1-208ENST00000485792 SEC24AO95486 1093 aa6.19□□□□□ -1.42
CUX1-208ENST00000485792 URODP06132 367 aa6.19□□□□□ -1.42
CUX1-208ENST00000485792 OR4Q2P0C623 313 aa6.19□□□□□ -1.42
CUX1-208ENST00000485792 SPATA31D3P0C874 917 aa6.19□□□□□ -1.42
CUX1-208ENST00000485792 IDEP14735 1019 aa6.19□□□□□ -1.42
CUX1-208ENST00000485792 TYMPP19971 482 aa6.19□□□□□ -1.42
CUX1-208ENST00000485792 HOXA9P31269 272 aa6.19□□□□□ -1.42
CUX1-208ENST00000485792 NDUFV1P49821 464 aa6.19□□□□□ -1.42
CUX1-208ENST00000485792 ASIC1P78348 528 aa6.19□□□□□ -1.42
CUX1-208ENST00000485792 DLG4P78352 724 aa6.19□□□□□ -1.42
CUX1-208ENST00000485792 NTHL1P78549 312 aa6.19□□□□□ -1.42
CUX1-208ENST00000485792 CREMQ03060 361 aa6.19□□□□□ -1.42
CUX1-208ENST00000485792 PNOCQ13519 176 aa6.19□□□□□ -1.42
CUX1-208ENST00000485792 BMS1Q14692 1282 aaKnown RBP6.19□□□□□ -1.42
CUX1-208ENST00000485792 KNOP1Q1ED39 458 aaKnown RBP6.19□□□□□ -1.42
CUX1-208ENST00000485792 SLC5A9Q2M3M2 681 aa6.19□□□□□ -1.42
CUX1-208ENST00000485792 UVSSAQ2YD98 709 aa6.19□□□□□ -1.42
CUX1-208ENST00000485792 FAM171A1Q5VUB5 890 aa6.19□□□□□ -1.42
CUX1-208ENST00000485792 C9orf57Q5W0N0 161 aa6.19□□□□□ -1.42
CUX1-208ENST00000485792 KIAA1841Q6NSI8 718 aa6.19□□□□□ -1.42
CUX1-208ENST00000485792 PDXDC1Q6P996 788 aa6.19□□□□□ -1.42
CUX1-208ENST00000485792 FOXR2Q6PJQ5 311 aa6.19□□□□□ -1.42
CUX1-208ENST00000485792 SPATA31D4Q6ZUB0 917 aa6.19□□□□□ -1.42
CUX1-208ENST00000485792 GPR149Q86SP6 731 aa6.19□□□□□ -1.42
CUX1-208ENST00000485792 GLYCTKQ8IVS8 523 aa6.19□□□□□ -1.42
CUX1-208ENST00000485792 NELFCDQ8IXH7 590 aa6.19□□□□□ -1.42
CUX1-208ENST00000485792 ZC3H3Q8IXZ2 948 aaKnown RBP6.19□□□□□ -1.42
CUX1-208ENST00000485792 PHTF2Q8N3S3 785 aa6.19□□□□□ -1.42
CUX1-208ENST00000485792 FSIP1Q8NA03 581 aa6.19□□□□□ -1.42
CUX1-208ENST00000485792 RASSF8Q8NHQ8 419 aa6.19□□□□□ -1.42
CUX1-208ENST00000485792 ZNF461Q8TAF7 563 aa6.19□□□□□ -1.42
CUX1-208ENST00000485792 RIN3Q8TB24 985 aa6.19□□□□□ -1.42
CUX1-208ENST00000485792 MICAL1Q8TDZ2 1067 aa6.19□□□□□ -1.42
CUX1-208ENST00000485792 POMGNT1Q8WZA1 660 aa6.19□□□□□ -1.42
CUX1-208ENST00000485792 LPIN3Q9BQK8 851 aa6.19□□□□□ -1.42
CUX1-208ENST00000485792 PHF7Q9BWX1 381 aaPredicted RBP6.19□□□□□ -1.42
CUX1-208ENST00000485792 PCIF1Q9H4Z3 704 aa6.19□□□□□ -1.42
CUX1-208ENST00000485792 IGFLR1Q9H665 355 aa6.19□□□□□ -1.42
CUX1-208ENST00000485792 RPF1Q9H9Y2 349 aaKnown RBP6.19□□□□□ -1.42
CUX1-208ENST00000485792 KIAA1586Q9HCI6 787 aa6.19□□□□□ -1.42
CUX1-208ENST00000485792 SLC39A2Q9NP94 309 aa6.19□□□□□ -1.42
CUX1-208ENST00000485792 AVENQ9NQS1 362 aaPredicted RBP6.19□□□□□ -1.42
CUX1-208ENST00000485792 AGPAT3Q9NRZ7 376 aa6.19□□□□□ -1.42
CUX1-208ENST00000485792 TMLHEQ9NVH6 421 aa6.19□□□□□ -1.42
CUX1-208ENST00000485792 GDAP2Q9NXN4 497 aa6.19□□□□□ -1.42
CUX1-208ENST00000485792 MAFFQ9ULX9 164 aa6.19□□□□□ -1.42
CUX1-208ENST00000485792 USTQ9Y2C2 406 aa6.19□□□□□ -1.42
CUX1-208ENST00000485792 SPAG17Q6Q759 2223 aa6.19□□□□□ -1.42
CUX1-208ENST00000485792 TRIM49BA6NDI0 452 aa6.18□□□□□ -1.42
CUX1-208ENST00000485792 GABRDO14764 452 aa6.18□□□□□ -1.42
CUX1-208ENST00000485792 TRAPPC3O43617 180 aa6.18□□□□□ -1.42
CUX1-208ENST00000485792 MOSPD3O75425 235 aa6.18□□□□□ -1.42
CUX1-208ENST00000485792 SOAT2O75908 522 aa6.18□□□□□ -1.42
CUX1-208ENST00000485792 VNN1O95497 513 aa6.18□□□□□ -1.42
CUX1-208ENST00000485792 STAU1O95793 577 aaKnown RBP6.18□□□□□ -1.42
CUX1-208ENST00000485792 RPN1P04843 607 aaKnown RBP6.18□□□□□ -1.42
CUX1-208ENST00000485792 ADH1AP07327 375 aa6.18□□□□□ -1.42
CUX1-208ENST00000485792 FAM163BP0C2L3 166 aa6.18□□□□□ -1.42
CUX1-208ENST00000485792 SP100P23497 879 aaPredicted RBP6.18□□□□□ -1.42
CUX1-208ENST00000485792 CCR2P41597 374 aa6.18□□□□□ -1.42
CUX1-208ENST00000485792 FAM160A1Q05DH4 1040 aa6.18□□□□□ -1.42
CUX1-208ENST00000485792 PPP2R3AQ06190 1150 aa6.18□□□□□ -1.42
CUX1-208ENST00000485792 NNTQ13423 1086 aa6.18□□□□□ -1.42
CUX1-208ENST00000485792 PSMD6Q15008 389 aa6.18□□□□□ -1.42
CUX1-208ENST00000485792 PSMD5Q16401 504 aa6.18□□□□□ -1.42
CUX1-208ENST00000485792 CENPPQ6IPU0 288 aa6.18□□□□□ -1.42
CUX1-208ENST00000485792 ANKS3Q6ZW76 656 aa6.18□□□□□ -1.42
CUX1-208ENST00000485792 STXBP4Q6ZWJ1 553 aa6.18□□□□□ -1.42
CUX1-208ENST00000485792 RNF135Q8IUD6 432 aa6.18□□□□□ -1.42
CUX1-208ENST00000485792 TCEAL8Q8IYN2 117 aa6.18□□□□□ -1.42
CUX1-208ENST00000485792 CEP57L1Q8IYX8 460 aa6.18□□□□□ -1.42
CUX1-208ENST00000485792 GPD1LQ8N335 351 aa6.18□□□□□ -1.42
CUX1-208ENST00000485792 GUF1Q8N442 669 aaKnown RBP6.18□□□□□ -1.42
CUX1-208ENST00000485792 SPATA18Q8TC71 538 aa6.18□□□□□ -1.42
CUX1-208ENST00000485792 KBTBD7Q8WVZ9 684 aa6.18□□□□□ -1.42
CUX1-208ENST00000485792 RIN2Q8WYP3 895 aaPredicted RBP6.18□□□□□ -1.42
CUX1-208ENST00000485792 NECTIN4Q96NY8 510 aa6.18□□□□□ -1.42
CUX1-208ENST00000485792 GSDMAQ96QA5 445 aa6.18□□□□□ -1.42
CUX1-208ENST00000485792 UHRF1Q96T88 793 aaPredicted RBP6.18□□□□□ -1.42
CUX1-208ENST00000485792 POP1Q99575 1024 aaKnown RBP6.18□□□□□ -1.42
CUX1-208ENST00000485792 EMILIN2Q9BXX0 1053 aa6.18□□□□□ -1.42
CUX1-208ENST00000485792 OXCT2Q9BYC2 517 aaPredicted RBP6.18□□□□□ -1.42
CUX1-208ENST00000485792 MTMR12Q9C0I1 747 aa6.18□□□□□ -1.42
CUX1-208ENST00000485792 SDCBP2Q9H190 292 aa6.18□□□□□ -1.42
CUX1-208ENST00000485792 XYLT2Q9H1B5 865 aa6.18□□□□□ -1.42
CUX1-208ENST00000485792 DNAJC25Q9H1X3 360 aa6.18□□□□□ -1.42
CUX1-208ENST00000485792 ZHX3Q9H4I2 956 aa6.18□□□□□ -1.42
CUX1-208ENST00000485792 VRTNQ9H8Y1 702 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms