RNA–Protein interactions for RNA: ENST00000485746.1

PTCD1-205, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 3

Gene PTCD1, Length 721 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-205ENST00000485746 LRRTM3Q86VH5 581 aa13.41□□□□□ -0.26
PTCD1-205ENST00000485746 OSTM1Q86WC4 334 aa13.41□□□□□ -0.26
PTCD1-205ENST00000485746 SPATA2LQ8IUW3 424 aaPredicted RBP13.41□□□□□ -0.26
PTCD1-205ENST00000485746 ELOA2Q8IYF1 753 aaPredicted RBP13.41□□□□□ -0.26
PTCD1-205ENST00000485746 LEMD2Q8NC56 503 aa13.41□□□□□ -0.26
PTCD1-205ENST00000485746 CCDC150Q8NCX0 1101 aa13.41□□□□□ -0.26
PTCD1-205ENST00000485746 ST13P5Q8NFI4 369 aaPredicted RBP13.41□□□□□ -0.26
PTCD1-205ENST00000485746 PLEKHO2Q8TD55 490 aa13.41□□□□□ -0.26
PTCD1-205ENST00000485746 RSAD2Q8WXG1 361 aa13.41□□□□□ -0.26
PTCD1-205ENST00000485746 FGF13Q92913 245 aa13.41□□□□□ -0.26
PTCD1-205ENST00000485746 PBXIP1Q96AQ6 731 aa13.41□□□□□ -0.26
PTCD1-205ENST00000485746 PI4K2AQ9BTU6 479 aa13.41□□□□□ -0.26
PTCD1-205ENST00000485746 SLITRK6Q9H5Y7 841 aa13.41□□□□□ -0.26
PTCD1-205ENST00000485746 CEP72Q9P209 647 aa13.41□□□□□ -0.26
PTCD1-205ENST00000485746 HSFX1Q9UBD0 423 aa13.41□□□□□ -0.26
PTCD1-205ENST00000485746 MAN1B1Q9UKM7 699 aa13.41□□□□□ -0.26
PTCD1-205ENST00000485746 FBXL21Q9UKT6 434 aa13.41□□□□□ -0.26
PTCD1-205ENST00000485746 ASB3Q9Y575 518 aa13.41□□□□□ -0.26
PTCD1-205ENST00000485746 SPTBN5Q9NRC6 3674 aaKnown RBP13.41□□□□□ -0.26
PTCD1-205ENST00000485746 BIN1O00499 593 aa13.4□□□□□ -0.26
PTCD1-205ENST00000485746 PSMA7O14818 248 aa13.4□□□□□ -0.26
PTCD1-205ENST00000485746 AKAP3O75969 853 aa13.4□□□□□ -0.26
PTCD1-205ENST00000485746 C4BPAP04003 597 aaKnown RBP13.4□□□□□ -0.26
PTCD1-205ENST00000485746 CEBPBP17676 345 aa13.4□□□□□ -0.26
PTCD1-205ENST00000485746 PPP1R2P41236 205 aa13.4□□□□□ -0.26
PTCD1-205ENST00000485746 DLG4P78352 724 aa13.4□□□□□ -0.26
PTCD1-205ENST00000485746 SGSM1Q2NKQ1 1148 aa13.4□□□□□ -0.26
PTCD1-205ENST00000485746 ZNF667Q5HYK9 610 aa13.4□□□□□ -0.26
PTCD1-205ENST00000485746 INTS6LQ5JSJ4 861 aaKnown RBP13.4□□□□□ -0.26
PTCD1-205ENST00000485746 KLHL10Q6JEL2 608 aa13.4□□□□□ -0.26
PTCD1-205ENST00000485746 TTC9BQ8N6N2 239 aa13.4□□□□□ -0.26
PTCD1-205ENST00000485746 GIPC2Q8TF65 315 aa13.4□□□□□ -0.26
PTCD1-205ENST00000485746 TMEM174Q8WUU8 243 aa13.4□□□□□ -0.26
PTCD1-205ENST00000485746 TCEAL4Q96EI5 215 aa13.4□□□□□ -0.26
PTCD1-205ENST00000485746 GCNAQ96QF7 691 aa13.4□□□□□ -0.26
PTCD1-205ENST00000485746 SYT15Q9BQS2 421 aa13.4□□□□□ -0.26
PTCD1-205ENST00000485746 IMPG2Q9BZV3 1241 aa13.4□□□□□ -0.26
PTCD1-205ENST00000485746 CRISPLD1Q9H336 500 aa13.4□□□□□ -0.26
PTCD1-205ENST00000485746 MFSD1Q9H3U5 465 aa13.4□□□□□ -0.26
PTCD1-205ENST00000485746 AVENQ9NQS1 362 aaPredicted RBP13.4□□□□□ -0.26
PTCD1-205ENST00000485746 GTF3C4Q9UKN8 822 aa13.4□□□□□ -0.26
PTCD1-205ENST00000485746 CDH9Q9ULB4 789 aa13.4□□□□□ -0.26
PTCD1-205ENST00000485746 VWA8A3KMH1 1905 aa13.4□□□□□ -0.26
PTCD1-205ENST00000485746 PDCD11Q14690 1871 aaKnown RBP13.4□□□□□ -0.26
PTCD1-205ENST00000485746 TCHHQ07283 1943 aa13.39□□□□□ -0.27
PTCD1-205ENST00000485746 IKBKBO14920 756 aa13.39□□□□□ -0.27
PTCD1-205ENST00000485746 STX10O60499 249 aa13.39□□□□□ -0.27
PTCD1-205ENST00000485746 VNN2O95498 520 aa13.39□□□□□ -0.27
PTCD1-205ENST00000485746 FGF19O95750 216 aa13.39□□□□□ -0.27
PTCD1-205ENST00000485746 TRIM49P0CI25 452 aa13.39□□□□□ -0.27
PTCD1-205ENST00000485746 TRIM49CP0CI26 452 aa13.39□□□□□ -0.27
PTCD1-205ENST00000485746 HAPLN1P10915 354 aaPredicted RBP13.39□□□□□ -0.27
PTCD1-205ENST00000485746 RFX1P22670 979 aa13.39□□□□□ -0.27
PTCD1-205ENST00000485746 WARSP23381 471 aaKnown RBP13.39□□□□□ -0.27
PTCD1-205ENST00000485746 LMO2P25791 158 aa13.39□□□□□ -0.27
PTCD1-205ENST00000485746 PSMC1P62191 440 aaKnown RBP13.39□□□□□ -0.27
PTCD1-205ENST00000485746 RPL10AP62906 217 aaKnown RBP13.39□□□□□ -0.27
PTCD1-205ENST00000485746 MAPRE1Q15691 268 aaKnown RBP13.39□□□□□ -0.27
PTCD1-205ENST00000485746 CAMK4Q16566 473 aa13.39□□□□□ -0.27
PTCD1-205ENST00000485746 ARHGAP15Q53QZ3 475 aa13.39□□□□□ -0.27
PTCD1-205ENST00000485746 COBLL1Q53SF7 1204 aa13.39□□□□□ -0.27
PTCD1-205ENST00000485746 TCERG1LQ5VWI1 586 aa13.39□□□□□ -0.27
PTCD1-205ENST00000485746 SCARA5Q6ZMJ2 495 aa13.39□□□□□ -0.27
PTCD1-205ENST00000485746 C4orf50Q6ZRC1 276 aa13.39□□□□□ -0.27
PTCD1-205ENST00000485746 DNAJB7Q7Z6W7 309 aaPredicted RBP13.39□□□□□ -0.27
PTCD1-205ENST00000485746 SCN4BQ8IWT1 228 aa13.39□□□□□ -0.27
PTCD1-205ENST00000485746 SUGP1Q8IWZ8 645 aaKnown RBP13.39□□□□□ -0.27
PTCD1-205ENST00000485746 NPAS3Q8IXF0 933 aa13.39□□□□□ -0.27
PTCD1-205ENST00000485746 SLC44A3Q8N4M1 653 aa13.39□□□□□ -0.27
PTCD1-205ENST00000485746 EEF2KMTQ96G04 330 aa13.39□□□□□ -0.27
PTCD1-205ENST00000485746 DHTKD1Q96HY7 919 aaPredicted RBP13.39□□□□□ -0.27
PTCD1-205ENST00000485746 LPIN3Q9BQK8 851 aa13.39□□□□□ -0.27
PTCD1-205ENST00000485746 MRPL45Q9BRJ2 306 aaKnown RBP13.39□□□□□ -0.27
PTCD1-205ENST00000485746 ATXN3LQ9H3M9 355 aa13.39□□□□□ -0.27
PTCD1-205ENST00000485746 SMOC2Q9H3U7 446 aa13.39□□□□□ -0.27
PTCD1-205ENST00000485746 C11orf16Q9NQ32 467 aa13.39□□□□□ -0.27
PTCD1-205ENST00000485746 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.39□□□□□ -0.27
PTCD1-205ENST00000485746 TMLHEQ9NVH6 421 aa13.39□□□□□ -0.27
PTCD1-205ENST00000485746 GDE1Q9NZC3 331 aa13.39□□□□□ -0.27
PTCD1-205ENST00000485746 MAGEC2Q9UBF1 373 aaPredicted RBP13.39□□□□□ -0.27
PTCD1-205ENST00000485746 NUMBLQ9Y6R0 609 aa13.39□□□□□ -0.27
PTCD1-205ENST00000485746 A8MXQ7 604 aa13.38□□□□□ -0.27
PTCD1-205ENST00000485746 STK25O00506 426 aa13.38□□□□□ -0.27
PTCD1-205ENST00000485746 GABRDO14764 452 aa13.38□□□□□ -0.27
PTCD1-205ENST00000485746 HCRTO43612 131 aa13.38□□□□□ -0.27
PTCD1-205ENST00000485746 ATP2C2O75185 946 aa13.38□□□□□ -0.27
PTCD1-205ENST00000485746 TACC1O75410 805 aa13.38□□□□□ -0.27
PTCD1-205ENST00000485746 STAU1O95793 577 aaKnown RBP13.38□□□□□ -0.27
PTCD1-205ENST00000485746 HLA-DRAP01903 254 aa13.38□□□□□ -0.27
PTCD1-205ENST00000485746 FAM163BP0C2L3 166 aa13.38□□□□□ -0.27
PTCD1-205ENST00000485746 GJA1P17302 382 aa13.38□□□□□ -0.27
PTCD1-205ENST00000485746 TRIM21P19474 475 aaKnown RBP13.38□□□□□ -0.27
PTCD1-205ENST00000485746 COL9A1P20849 921 aa13.38□□□□□ -0.27
PTCD1-205ENST00000485746 CCNE1P24864 410 aa13.38□□□□□ -0.27
PTCD1-205ENST00000485746 GCLMP48507 274 aa13.38□□□□□ -0.27
PTCD1-205ENST00000485746 CLDN10P78369 228 aa13.38□□□□□ -0.27
PTCD1-205ENST00000485746 FKBP3Q00688 224 aaKnown RBP13.38□□□□□ -0.27
PTCD1-205ENST00000485746 CYP27A1Q02318 531 aa13.38□□□□□ -0.27
PTCD1-205ENST00000485746 LRRC63Q05C16 580 aa13.38□□□□□ -0.27
PTCD1-205ENST00000485746 SLC5A9Q2M3M2 681 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms