RNA–Protein interactions for RNA: ENST00000485607.1

CLRN1-206, Transcript of clarin 1, humanhuman

TSL 1 (best)

Gene CLRN1, Length 704 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-206ENST00000485607 PP2D1A8MPX8 630 aa8.16□□□□□ -1.1
CLRN1-206ENST00000485607 ADAM12O43184 909 aa8.16□□□□□ -1.1
CLRN1-206ENST00000485607 CLUHO75153 1309 aa8.16□□□□□ -1.1
CLRN1-206ENST00000485607 PRKCBP05771 671 aa8.16□□□□□ -1.1
CLRN1-206ENST00000485607 NPR3P17342 541 aa8.16□□□□□ -1.1
CLRN1-206ENST00000485607 CYP11B2P19099 503 aa8.16□□□□□ -1.1
CLRN1-206ENST00000485607 RPA1P27694 616 aa8.16□□□□□ -1.1
CLRN1-206ENST00000485607 TOB1P50616 345 aaPredicted RBP8.16□□□□□ -1.1
CLRN1-206ENST00000485607 TUSC3Q13454 348 aa8.16□□□□□ -1.1
CLRN1-206ENST00000485607 PRPF4BQ13523 1007 aaKnown RBP8.16□□□□□ -1.1
CLRN1-206ENST00000485607 HSP90AA2PQ14568 343 aaPredicted RBP8.16□□□□□ -1.1
CLRN1-206ENST00000485607 FAM187BQ17R55 369 aa8.16□□□□□ -1.1
CLRN1-206ENST00000485607 LILRA6Q6PI73 481 aa8.16□□□□□ -1.1
CLRN1-206ENST00000485607 ZBTB8OSQ8IWT0 167 aa8.16□□□□□ -1.1
CLRN1-206ENST00000485607 HACE1Q8IYU2 909 aa8.16□□□□□ -1.1
CLRN1-206ENST00000485607 SMG7Q92540 1137 aaKnown RBP8.16□□□□□ -1.1
CLRN1-206ENST00000485607 ACSF2Q96CM8 615 aaPredicted RBP8.16□□□□□ -1.1
CLRN1-206ENST00000485607 KLHDC7BQ96G42 594 aa8.16□□□□□ -1.1
CLRN1-206ENST00000485607 MYADMQ96S97 322 aa8.16□□□□□ -1.1
CLRN1-206ENST00000485607 LLPHQ9BRT6 129 aaKnown RBP8.16□□□□□ -1.1
CLRN1-206ENST00000485607 BHMT2Q9H2M3 363 aa8.16□□□□□ -1.1
CLRN1-206ENST00000485607 FOXP1Q9H334 677 aaPredicted RBP8.16□□□□□ -1.1
CLRN1-206ENST00000485607 WDR6Q9NNW5 1121 aaKnown RBP8.16□□□□□ -1.1
CLRN1-206ENST00000485607 ZMYM2Q9UBW7 1377 aa8.16□□□□□ -1.1
CLRN1-206ENST00000485607 C2orf16Q68DN1 1984 aa8.15□□□□□ -1.1
CLRN1-206ENST00000485607 SF3B1O75533 1304 aaKnown RBP eCLIP8.15□□□□□ -1.1
CLRN1-206ENST00000485607 ACKR2O00590 384 aa8.15□□□□□ -1.1
CLRN1-206ENST00000485607 N4BP3O15049 544 aa8.15□□□□□ -1.1
CLRN1-206ENST00000485607 PI15O43692 258 aa8.15□□□□□ -1.1
CLRN1-206ENST00000485607 TADA2AO75478 443 aa8.15□□□□□ -1.1
CLRN1-206ENST00000485607 PAPLNO95428 1278 aa8.15□□□□□ -1.1
CLRN1-206ENST00000485607 GBP2P32456 591 aaPredicted RBP8.15□□□□□ -1.1
CLRN1-206ENST00000485607 CCT6AP40227 531 aaKnown RBP8.15□□□□□ -1.1
CLRN1-206ENST00000485607 NAMPTP43490 491 aa8.15□□□□□ -1.1
CLRN1-206ENST00000485607 RBM25P49756 843 aaKnown RBP8.15□□□□□ -1.1
CLRN1-206ENST00000485607 NTHL1P78549 312 aa8.15□□□□□ -1.1
CLRN1-206ENST00000485607 TDGQ13569 410 aa8.15□□□□□ -1.1
CLRN1-206ENST00000485607 IL17AQ16552 155 aa8.15□□□□□ -1.1
CLRN1-206ENST00000485607 MAPK6Q16659 721 aa8.15□□□□□ -1.1
CLRN1-206ENST00000485607 TMEM132AQ24JP5 1023 aa8.15□□□□□ -1.1
CLRN1-206ENST00000485607 USP41Q3LFD5 358 aa8.15□□□□□ -1.1
CLRN1-206ENST00000485607 GLRA4Q5JXX5 417 aa8.15□□□□□ -1.1
CLRN1-206ENST00000485607 NT5DC1Q5TFE4 455 aa8.15□□□□□ -1.1
CLRN1-206ENST00000485607 FAM171A1Q5VUB5 890 aa8.15□□□□□ -1.1
CLRN1-206ENST00000485607 DAW1Q8N136 415 aa8.15□□□□□ -1.1
CLRN1-206ENST00000485607 CEP120Q8N960 986 aa8.15□□□□□ -1.1
CLRN1-206ENST00000485607 FLCNQ8NFG4 579 aa8.15□□□□□ -1.1
CLRN1-206ENST00000485607 ERMNQ8TAM6 284 aa8.15□□□□□ -1.1
CLRN1-206ENST00000485607 DEPTORQ8TB45 409 aa8.15□□□□□ -1.1
CLRN1-206ENST00000485607 ATOH1Q92858 354 aaPredicted RBP8.15□□□□□ -1.1
CLRN1-206ENST00000485607 PRRX2Q99811 253 aa8.15□□□□□ -1.1
CLRN1-206ENST00000485607 CLSTN3Q9BQT9 956 aa8.15□□□□□ -1.1
CLRN1-206ENST00000485607 NT5C3AQ9H0P0 336 aa8.15□□□□□ -1.1
CLRN1-206ENST00000485607 C2orf40Q9H1Z8 148 aa8.15□□□□□ -1.1
CLRN1-206ENST00000485607 DDX19AQ9NUU7 478 aaKnown RBP8.15□□□□□ -1.1
CLRN1-206ENST00000485607 DUSP12Q9UNI6 340 aa8.15□□□□□ -1.1
CLRN1-206ENST00000485607 SSX2IPQ9Y2D8 614 aa8.15□□□□□ -1.1
CLRN1-206ENST00000485607 GDAQ9Y2T3 454 aa8.15□□□□□ -1.1
CLRN1-206ENST00000485607 PCDHB6Q9Y5E3 794 aa8.15□□□□□ -1.1
CLRN1-206ENST00000485607 E9PMD0 336 aa8.14□□□□□ -1.11
CLRN1-206ENST00000485607 I3L4J1 428 aa8.14□□□□□ -1.11
CLRN1-206ENST00000485607 MEFVO15553 781 aaPredicted RBP8.14□□□□□ -1.11
CLRN1-206ENST00000485607 PRMT3O60678 531 aa8.14□□□□□ -1.11
CLRN1-206ENST00000485607 EPHA1P21709 976 aa8.14□□□□□ -1.11
CLRN1-206ENST00000485607 CDC25AP30304 524 aa8.14□□□□□ -1.11
CLRN1-206ENST00000485607 SOX4Q06945 474 aaPredicted RBP8.14□□□□□ -1.11
CLRN1-206ENST00000485607 MAPK7Q13164 816 aa8.14□□□□□ -1.11
CLRN1-206ENST00000485607 ORC2Q13416 577 aaPredicted RBP8.14□□□□□ -1.11
CLRN1-206ENST00000485607 PSMD5Q16401 504 aa8.14□□□□□ -1.11
CLRN1-206ENST00000485607 C8orf34Q49A92 452 aa8.14□□□□□ -1.11
CLRN1-206ENST00000485607 ERICH6BQ5W0A0 696 aa8.14□□□□□ -1.11
CLRN1-206ENST00000485607 HAUS3Q68CZ6 603 aa8.14□□□□□ -1.11
CLRN1-206ENST00000485607 C16orf46Q6P387 395 aa8.14□□□□□ -1.11
CLRN1-206ENST00000485607 FDX2Q6P4F2 183 aa8.14□□□□□ -1.11
CLRN1-206ENST00000485607 CD300LGQ6UXG3 332 aa8.14□□□□□ -1.11
CLRN1-206ENST00000485607 RSPO2Q6UXX9 243 aaPredicted RBP8.14□□□□□ -1.11
CLRN1-206ENST00000485607 GET4Q7L5D6 327 aaPredicted RBP8.14□□□□□ -1.11
CLRN1-206ENST00000485607 KCNK18Q7Z418 384 aa8.14□□□□□ -1.11
CLRN1-206ENST00000485607 CEP57Q86XR8 500 aa8.14□□□□□ -1.11
CLRN1-206ENST00000485607 IGSF22Q8N9C0 903 aa8.14□□□□□ -1.11
CLRN1-206ENST00000485607 C3orf58Q8NDZ4 430 aa8.14□□□□□ -1.11
CLRN1-206ENST00000485607 GIMAP7Q8NHV1 300 aa8.14□□□□□ -1.11
CLRN1-206ENST00000485607 LNX1Q8TBB1 728 aaPredicted RBP8.14□□□□□ -1.11
CLRN1-206ENST00000485607 SNX29Q8TEQ0 813 aa8.14□□□□□ -1.11
CLRN1-206ENST00000485607 TTPALQ9BTX7 342 aa8.14□□□□□ -1.11
CLRN1-206ENST00000485607 MMTAG2Q9BU76 263 aaKnown RBP8.14□□□□□ -1.11
CLRN1-206ENST00000485607 RUSC1Q9BVN2 902 aa8.14□□□□□ -1.11
CLRN1-206ENST00000485607 RHOBTB2Q9BYZ6 727 aa8.14□□□□□ -1.11
CLRN1-206ENST00000485607 SAP130Q9H0E3 1048 aa8.14□□□□□ -1.11
CLRN1-206ENST00000485607 MFSD1Q9H3U5 465 aa8.14□□□□□ -1.11
CLRN1-206ENST00000485607 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.14□□□□□ -1.11
CLRN1-206ENST00000485607 FNIP2Q9P278 1114 aa8.14□□□□□ -1.11
CLRN1-206ENST00000485607 EPS15L1Q9UBC2 864 aa8.14□□□□□ -1.11
CLRN1-206ENST00000485607 LRWD1Q9UFC0 647 aa8.14□□□□□ -1.11
CLRN1-206ENST00000485607 FBXW11Q9UKB1 542 aa8.14□□□□□ -1.11
CLRN1-206ENST00000485607 ARID1BQ8NFD5 2236 aaPredicted RBP8.13□□□□□ -1.11
CLRN1-206ENST00000485607 THP07101 528 aa8.13□□□□□ -1.11
CLRN1-206ENST00000485607 LAMP2P13473 410 aa8.13□□□□□ -1.11
CLRN1-206ENST00000485607 AOC1P19801 751 aa8.13□□□□□ -1.11
CLRN1-206ENST00000485607 U2AF2P26368 475 aaKnown RBP eCLIP8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms