RNA–Protein interactions for RNA: ENST00000485513.1

HLA-F-227, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 778 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-227ENST00000485513 PCIF1Q9H4Z3 704 aa27.69■■■□□ 2.02
HLA-F-227ENST00000485513 ABI2Q9NYB9 513 aaPredicted RBP27.69■■■□□ 2.02
HLA-F-227ENST00000485513 TFIP11Q9UBB9 837 aaKnown RBP27.69■■■□□ 2.02
HLA-F-227ENST00000485513 NUP210Q8TEM1 1887 aaPredicted RBP27.69■■■□□ 2.02
HLA-F-227ENST00000485513 ARNTLO00327 626 aa27.68■■■□□ 2.02
HLA-F-227ENST00000485513 DPYSL4O14531 572 aa27.68■■■□□ 2.02
HLA-F-227ENST00000485513 CHADO15335 359 aa27.68■■■□□ 2.02
HLA-F-227ENST00000485513 HAPLN1P10915 354 aaPredicted RBP27.68■■■□□ 2.02
HLA-F-227ENST00000485513 FCHO2Q0JRZ9 810 aa27.68■■■□□ 2.02
HLA-F-227ENST00000485513 TAF12Q16514 161 aa27.68■■■□□ 2.02
HLA-F-227ENST00000485513 GIPC2Q8TF65 315 aa27.68■■■□□ 2.02
HLA-F-227ENST00000485513 GCNAQ96QF7 691 aa27.68■■■□□ 2.02
HLA-F-227ENST00000485513 LRRC27Q9C0I9 530 aa27.68■■■□□ 2.02
HLA-F-227ENST00000485513 TNMDQ9H2S6 317 aa27.68■■■□□ 2.02
HLA-F-227ENST00000485513 PPP6R2O75170 966 aa27.67■■■□□ 2.02
HLA-F-227ENST00000485513 CDC25CP30307 473 aa27.67■■■□□ 2.02
HLA-F-227ENST00000485513 TSPY1Q01534 308 aa27.67■■■□□ 2.02
HLA-F-227ENST00000485513 MTAPQ13126 283 aa27.67■■■□□ 2.02
HLA-F-227ENST00000485513 STXBP4Q6ZWJ1 553 aa27.67■■■□□ 2.02
HLA-F-227ENST00000485513 CSGALNACT2Q8N6G5 542 aa27.67■■■□□ 2.02
HLA-F-227ENST00000485513 LRRC52Q8N7C0 313 aa27.67■■■□□ 2.02
HLA-F-227ENST00000485513 CHRDQ9H2X0 955 aa27.67■■■□□ 2.02
HLA-F-227ENST00000485513 TASP1Q9H6P5 420 aa27.67■■■□□ 2.02
HLA-F-227ENST00000485513 PDE11AQ9HCR9 933 aa27.67■■■□□ 2.02
HLA-F-227ENST00000485513 ITGA11Q9UKX5 1188 aa27.67■■■□□ 2.02
HLA-F-227ENST00000485513 PCDHB5Q9Y5E4 795 aa27.67■■■□□ 2.02
HLA-F-227ENST00000485513 PCDHGA2Q9Y5H1 932 aa27.67■■■□□ 2.02
HLA-F-227ENST00000485513 OTOGLQ3ZCN5 2332 aa27.67■■■□□ 2.02
HLA-F-227ENST00000485513 CCNE1P24864 410 aa27.66■■■□□ 2.02
HLA-F-227ENST00000485513 MLLT6P55198 1093 aaPredicted RBP27.66■■■□□ 2.02
HLA-F-227ENST00000485513 CYP4F8P98187 520 aa27.66■■■□□ 2.02
HLA-F-227ENST00000485513 BFSP1Q12934 665 aa27.66■■■□□ 2.02
HLA-F-227ENST00000485513 E2F4Q16254 413 aa27.66■■■□□ 2.02
HLA-F-227ENST00000485513 GPD1LQ8N335 351 aa27.66■■■□□ 2.02
HLA-F-227ENST00000485513 PDCL2Q8N4E4 241 aa27.66■■■□□ 2.02
HLA-F-227ENST00000485513 ATRIPQ8WXE1 791 aa27.66■■■□□ 2.02
HLA-F-227ENST00000485513 HINFPQ9BQA5 517 aa27.66■■■□□ 2.02
HLA-F-227ENST00000485513 CUEDC2Q9H467 287 aa27.66■■■□□ 2.02
HLA-F-227ENST00000485513 IL21Q9HBE4 155 aa27.66■■■□□ 2.02
HLA-F-227ENST00000485513 PRMT8Q9NR22 394 aaPredicted RBP27.66■■■□□ 2.02
HLA-F-227ENST00000485513 KBTBD4Q9NVX7 518 aa27.66■■■□□ 2.02
HLA-F-227ENST00000485513 OBP2AQ9NY56 170 aa27.66■■■□□ 2.02
HLA-F-227ENST00000485513 L1RE1Q9UN81 338 aa27.66■■■□□ 2.02
HLA-F-227ENST00000485513 FRYLO94915 3013 aa27.65■■■□□ 2.02
HLA-F-227ENST00000485513 KIAA0391O15091 583 aaKnown RBP27.65■■■□□ 2.02
HLA-F-227ENST00000485513 HUS1O60921 280 aa27.65■■■□□ 2.02
HLA-F-227ENST00000485513 GLIS3Q8NEA6 775 aa27.65■■■□□ 2.02
HLA-F-227ENST00000485513 CXorf38Q8TB03 319 aa27.65■■■□□ 2.02
HLA-F-227ENST00000485513 MSANTD3Q96H12 275 aa27.65■■■□□ 2.02
HLA-F-227ENST00000485513 FAM84AQ96KN4 292 aa27.65■■■□□ 2.02
HLA-F-227ENST00000485513 LRRC3BQ96PB8 259 aa27.65■■■□□ 2.02
HLA-F-227ENST00000485513 TRIM9Q9C026 710 aa27.65■■■□□ 2.02
HLA-F-227ENST00000485513 LMAN1LQ9HAT1 526 aa27.65■■■□□ 2.02
HLA-F-227ENST00000485513 TMLHEQ9NVH6 421 aa27.65■■■□□ 2.02
HLA-F-227ENST00000485513 ZSCAN32Q9NX65 697 aa27.65■■■□□ 2.02
HLA-F-227ENST00000485513 YEATS4O95619 227 aa27.64■■■□□ 2.02
HLA-F-227ENST00000485513 KRT19P08727 400 aa27.64■■■□□ 2.02
HLA-F-227ENST00000485513 TMEM191BP0C7N4 346 aa27.64■■■□□ 2.02
HLA-F-227ENST00000485513 WEE1P30291 646 aa27.64■■■□□ 2.02
HLA-F-227ENST00000485513 KPNA1P52294 538 aaPredicted RBP27.64■■■□□ 2.02
HLA-F-227ENST00000485513 RBP5P82980 135 aa27.64■■■□□ 2.02
HLA-F-227ENST00000485513 AMPD3Q01432 767 aa27.64■■■□□ 2.02
HLA-F-227ENST00000485513 NFE2Q16621 373 aaPredicted RBP27.64■■■□□ 2.02
HLA-F-227ENST00000485513 ARHGAP29Q52LW3 1261 aa27.64■■■□□ 2.02
HLA-F-227ENST00000485513 TSSK4Q6SA08 328 aa27.64■■■□□ 2.02
HLA-F-227ENST00000485513 TMEM86AQ8N2M4 240 aa27.64■■■□□ 2.02
HLA-F-227ENST00000485513 SUMF1Q8NBK3 374 aa27.64■■■□□ 2.02
HLA-F-227ENST00000485513 ZBTB44Q8NCP5 570 aa27.64■■■□□ 2.02
HLA-F-227ENST00000485513 RUBCNQ92622 972 aa27.64■■■□□ 2.02
HLA-F-227ENST00000485513 HPS3Q969F9 1004 aa27.64■■■□□ 2.02
HLA-F-227ENST00000485513 SNX21Q969T3 373 aa27.64■■■□□ 2.02
HLA-F-227ENST00000485513 DHX58Q96C10 678 aa27.64■■■□□ 2.02
HLA-F-227ENST00000485513 IER2Q9BTL4 223 aa27.64■■■□□ 2.02
HLA-F-227ENST00000485513 MTMR12Q9C0I1 747 aa27.64■■■□□ 2.02
HLA-F-227ENST00000485513 C8orf33Q9H7E9 229 aaPredicted RBP27.64■■■□□ 2.02
HLA-F-227ENST00000485513 SLC38A8A6NNN8 435 aa27.63■■■□□ 2.01
HLA-F-227ENST00000485513 CUTAO60888 179 aa27.63■■■□□ 2.01
HLA-F-227ENST00000485513 PRAMEF12O95522 483 aa27.63■■■□□ 2.01
HLA-F-227ENST00000485513 FOXD4L5Q5VV16 416 aaPredicted RBP27.63■■■□□ 2.01
HLA-F-227ENST00000485513 SCARA3Q6AZY7 606 aa27.63■■■□□ 2.01
HLA-F-227ENST00000485513 C1orf228Q6PIY5 440 aa27.63■■■□□ 2.01
HLA-F-227ENST00000485513 FOXD4L4Q8WXT5 416 aaPredicted RBP27.63■■■□□ 2.01
HLA-F-227ENST00000485513 NELL1Q92832 810 aa27.63■■■□□ 2.01
HLA-F-227ENST00000485513 ACBD6Q9BR61 282 aa27.63■■■□□ 2.01
HLA-F-227ENST00000485513 PI4K2AQ9BTU6 479 aa27.63■■■□□ 2.01
HLA-F-227ENST00000485513 GDAP2Q9NXN4 497 aa27.63■■■□□ 2.01
HLA-F-227ENST00000485513 DDX43Q9NXZ2 648 aaKnown RBP27.63■■■□□ 2.01
HLA-F-227ENST00000485513 SIX4Q9UIU6 781 aa27.63■■■□□ 2.01
HLA-F-227ENST00000485513 SNX9Q9Y5X1 595 aa27.63■■■□□ 2.01
HLA-F-227ENST00000485513 PRPF40AO75400 957 aaKnown RBP27.62■■■□□ 2.01
HLA-F-227ENST00000485513 ASIC1P78348 528 aa27.62■■■□□ 2.01
HLA-F-227ENST00000485513 MYL7Q01449 175 aa27.62■■■□□ 2.01
HLA-F-227ENST00000485513 MAMSTRQ6ZN01 415 aa27.62■■■□□ 2.01
HLA-F-227ENST00000485513 IQUBQ8NA54 791 aa27.62■■■□□ 2.01
HLA-F-227ENST00000485513 BPIFB1Q8TDL5 484 aa27.62■■■□□ 2.01
HLA-F-227ENST00000485513 LEO1Q8WVC0 666 aaPredicted RBP27.62■■■□□ 2.01
HLA-F-227ENST00000485513 ANKRD36BP1Q96IX9 119 aa27.62■■■□□ 2.01
HLA-F-227ENST00000485513 ZFYVE19Q96K21 471 aa27.62■■■□□ 2.01
HLA-F-227ENST00000485513 ZMYM5Q9UJ78 669 aa27.62■■■□□ 2.01
HLA-F-227ENST00000485513 R3HCC1Q9Y3T6 440 aaKnown RBP27.62■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms