RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 DLL3Q9NYJ7 618 aa20.76■□□□□ 0.91
COL27A1-205ENST00000485397 CEP250Q9BV73 2442 aa20.75■□□□□ 0.91
COL27A1-205ENST00000485397 MYBPHLA2RUH7 354 aa20.75■□□□□ 0.91
COL27A1-205ENST00000485397 SPECC1L-ADORA2AF8WAN1 911 aa20.75■□□□□ 0.91
COL27A1-205ENST00000485397 PDCP20941 246 aa20.75■□□□□ 0.91
COL27A1-205ENST00000485397 CDC25CP30307 473 aa20.75■□□□□ 0.91
COL27A1-205ENST00000485397 CTHP32929 405 aa20.75■□□□□ 0.91
COL27A1-205ENST00000485397 CXCL12P48061 93 aa20.75■□□□□ 0.91
COL27A1-205ENST00000485397 NRLP54845 237 aa20.75■□□□□ 0.91
COL27A1-205ENST00000485397 LPAL2Q16609 132 aa20.75■□□□□ 0.91
COL27A1-205ENST00000485397 SV2CQ496J9 727 aa20.75■□□□□ 0.91
COL27A1-205ENST00000485397 L1TD1Q5T7N2 865 aaKnown RBP20.75■□□□□ 0.91
COL27A1-205ENST00000485397 SCARA3Q6AZY7 606 aa20.75■□□□□ 0.91
COL27A1-205ENST00000485397 SPPL2BQ8TCT7 592 aa20.75■□□□□ 0.91
COL27A1-205ENST00000485397 BPIFB1Q8TDL5 484 aa20.75■□□□□ 0.91
COL27A1-205ENST00000485397 C2orf15Q8WU43 125 aaKnown RBP20.75■□□□□ 0.91
COL27A1-205ENST00000485397 SECISBP2LQ93073 1101 aaKnown RBP20.75■□□□□ 0.91
COL27A1-205ENST00000485397 FAM84AQ96KN4 292 aa20.75■□□□□ 0.91
COL27A1-205ENST00000485397 ACCSQ96QU6 501 aa20.75■□□□□ 0.91
COL27A1-205ENST00000485397 SLC46A2Q9BY10 475 aa20.75■□□□□ 0.91
COL27A1-205ENST00000485397 PANK2Q9BZ23 570 aa20.75■□□□□ 0.91
COL27A1-205ENST00000485397 OBP2AQ9NY56 170 aa20.75■□□□□ 0.91
COL27A1-205ENST00000485397 SEL1LQ9UBV2 794 aa20.75■□□□□ 0.91
COL27A1-205ENST00000485397 EXOC7Q9UPT5 735 aa20.75■□□□□ 0.91
COL27A1-205ENST00000485397 GCNT3O95395 438 aa20.74■□□□□ 0.91
COL27A1-205ENST00000485397 GAP43P17677 238 aa20.74■□□□□ 0.91
COL27A1-205ENST00000485397 SYT1P21579 422 aa20.74■□□□□ 0.91
COL27A1-205ENST00000485397 WEE1P30291 646 aa20.74■□□□□ 0.91
COL27A1-205ENST00000485397 POLR2BP30876 1174 aaKnown RBP20.74■□□□□ 0.91
COL27A1-205ENST00000485397 CASP5P51878 434 aa20.74■□□□□ 0.91
COL27A1-205ENST00000485397 TFAMQ00059 246 aaKnown RBP20.74■□□□□ 0.91
COL27A1-205ENST00000485397 TNK2Q07912 1038 aa20.74■□□□□ 0.91
COL27A1-205ENST00000485397 DMWDQ09019 674 aa20.74■□□□□ 0.91
COL27A1-205ENST00000485397 SMARCB1Q12824 385 aa20.74■□□□□ 0.91
COL27A1-205ENST00000485397 LRRC32Q14392 662 aa20.74■□□□□ 0.91
COL27A1-205ENST00000485397 PPP2R5DQ14738 602 aa20.74■□□□□ 0.91
COL27A1-205ENST00000485397 TAF12Q16514 161 aa20.74■□□□□ 0.91
COL27A1-205ENST00000485397 Q6ZS52 159 aa20.74■□□□□ 0.91
COL27A1-205ENST00000485397 RALGPS2Q86X27 583 aaPredicted RBP20.74■□□□□ 0.91
COL27A1-205ENST00000485397 NT5DC4Q86YG4 428 aa20.74■□□□□ 0.91
COL27A1-205ENST00000485397 BRSK2Q8IWQ3 736 aa20.74■□□□□ 0.91
COL27A1-205ENST00000485397 DCP1BQ8IZD4 617 aaKnown RBP20.74■□□□□ 0.91
COL27A1-205ENST00000485397 SPEM1Q8N4L4 309 aa20.74■□□□□ 0.91
COL27A1-205ENST00000485397 ZNF560Q96MR9 790 aa20.74■□□□□ 0.91
COL27A1-205ENST00000485397 GCNAQ96QF7 691 aa20.74■□□□□ 0.91
COL27A1-205ENST00000485397 FGFBP2Q9BYJ0 223 aa20.74■□□□□ 0.91
COL27A1-205ENST00000485397 AGAP1Q9UPQ3 857 aa20.74■□□□□ 0.91
COL27A1-205ENST00000485397 CACNA1AO00555 2505 aa20.73■□□□□ 0.91
COL27A1-205ENST00000485397 GOLGA8IPA6NC78 632 aa20.73■□□□□ 0.91
COL27A1-205ENST00000485397 GOLGA8JA6NMD2 632 aa20.73■□□□□ 0.91
COL27A1-205ENST00000485397 IDEP14735 1019 aa20.73■□□□□ 0.91
COL27A1-205ENST00000485397 TGM1P22735 817 aa20.73■□□□□ 0.91
COL27A1-205ENST00000485397 TXLNAP40222 546 aa20.73■□□□□ 0.91
COL27A1-205ENST00000485397 GPR15P49685 360 aa20.73■□□□□ 0.91
COL27A1-205ENST00000485397 PON2Q15165 354 aa20.73■□□□□ 0.91
COL27A1-205ENST00000485397 C1orf228Q6PIY5 440 aa20.73■□□□□ 0.91
COL27A1-205ENST00000485397 TMEM150AQ86TG1 271 aa20.73■□□□□ 0.91
COL27A1-205ENST00000485397 C1orf127Q8N9H9 656 aa20.73■□□□□ 0.91
COL27A1-205ENST00000485397 STKLD1Q8NE28 680 aa20.73■□□□□ 0.91
COL27A1-205ENST00000485397 C2orf42Q9NWW7 574 aa20.73■□□□□ 0.91
COL27A1-205ENST00000485397 PCDHB5Q9Y5E4 795 aa20.73■□□□□ 0.91
COL27A1-205ENST00000485397 A0A087X0B3 334 aa20.72■□□□□ 0.91
COL27A1-205ENST00000485397 CHURC1-FNTBB4DL54 471 aa20.72■□□□□ 0.91
COL27A1-205ENST00000485397 ITGB3P05106 788 aa20.72■□□□□ 0.91
COL27A1-205ENST00000485397 HMGA1P17096 107 aaKnown RBP20.72■□□□□ 0.91
COL27A1-205ENST00000485397 FNTBP49356 437 aa20.72■□□□□ 0.91
COL27A1-205ENST00000485397 DGKKQ5KSL6 1271 aa20.72■□□□□ 0.91
COL27A1-205ENST00000485397 SDHAF4Q5VUM1 108 aa20.72■□□□□ 0.91
COL27A1-205ENST00000485397 PDCL2Q8N4E4 241 aa20.72■□□□□ 0.91
COL27A1-205ENST00000485397 GPR161Q8N6U8 529 aaKnown RBP20.72■□□□□ 0.91
COL27A1-205ENST00000485397 USP28Q96RU2 1077 aa20.72■□□□□ 0.91
COL27A1-205ENST00000485397 CBWD1Q9BRT8 395 aa20.72■□□□□ 0.91
COL27A1-205ENST00000485397 PI4K2AQ9BTU6 479 aa20.72■□□□□ 0.91
COL27A1-205ENST00000485397 PARD6AQ9NPB6 346 aa20.72■□□□□ 0.91
COL27A1-205ENST00000485397 RBAKQ9NYW8 714 aaPredicted RBP20.72■□□□□ 0.91
COL27A1-205ENST00000485397 GMEB2Q9UKD1 530 aa20.72■□□□□ 0.91
COL27A1-205ENST00000485397 USP18Q9UMW8 372 aa20.72■□□□□ 0.91
COL27A1-205ENST00000485397 L1RE1Q9UN81 338 aa20.72■□□□□ 0.91
COL27A1-205ENST00000485397 PCDHB13Q9Y5F0 798 aa20.72■□□□□ 0.91
COL27A1-205ENST00000485397 NUP210Q8TEM1 1887 aaPredicted RBP20.72■□□□□ 0.91
COL27A1-205ENST00000485397 TCHHQ07283 1943 aa20.72■□□□□ 0.91
COL27A1-205ENST00000485397 WDR87Q6ZQQ6 2873 aa20.71■□□□□ 0.91
COL27A1-205ENST00000485397 PRPF40AO75400 957 aaKnown RBP20.71■□□□□ 0.91
COL27A1-205ENST00000485397 PRPF6O94906 941 aaKnown RBP20.71■□□□□ 0.91
COL27A1-205ENST00000485397 F11P03951 625 aa20.71■□□□□ 0.91
COL27A1-205ENST00000485397 GARTP22102 1010 aa20.71■□□□□ 0.91
COL27A1-205ENST00000485397 HOXC13P31276 330 aa20.71■□□□□ 0.91
COL27A1-205ENST00000485397 PNPLA4P41247 253 aa20.71■□□□□ 0.91
COL27A1-205ENST00000485397 STAT6P42226 847 aa20.71■□□□□ 0.91
COL27A1-205ENST00000485397 NLRP12P59046 1061 aa20.71■□□□□ 0.91
COL27A1-205ENST00000485397 PLCB2Q00722 1185 aa20.71■□□□□ 0.91
COL27A1-205ENST00000485397 TSPY1Q01534 308 aa20.71■□□□□ 0.91
COL27A1-205ENST00000485397 CCDC73Q6ZRK6 1079 aa20.71■□□□□ 0.91
COL27A1-205ENST00000485397 PRR23BQ6ZRT6 265 aa20.71■□□□□ 0.91
COL27A1-205ENST00000485397 SYCP3Q8IZU3 236 aa20.71■□□□□ 0.91
COL27A1-205ENST00000485397 CMTM8Q8IZV2 173 aa20.71■□□□□ 0.91
COL27A1-205ENST00000485397 CELF5Q8N6W0 485 aaKnown RBP20.71■□□□□ 0.91
COL27A1-205ENST00000485397 CXorf38Q8TB03 319 aa20.71■□□□□ 0.91
COL27A1-205ENST00000485397 NOC3LQ8WTT2 800 aaKnown RBP20.71■□□□□ 0.91
COL27A1-205ENST00000485397 PCIF1Q9H4Z3 704 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 188.7 ms