RNA–Protein interactions for RNA: ENST00000485275.2

LRIF1-202, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRIF1, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-202ENST00000485275 PDGFRBP09619 1106 aa15.48■□□□□ 0.07
LRIF1-202ENST00000485275 UNGP13051 313 aaPredicted RBP15.48■□□□□ 0.07
LRIF1-202ENST00000485275 TNFAIP3P21580 790 aa15.48■□□□□ 0.07
LRIF1-202ENST00000485275 MSNP26038 577 aaKnown RBP15.48■□□□□ 0.07
LRIF1-202ENST00000485275 CDR1P51861 262 aa15.48■□□□□ 0.07
LRIF1-202ENST00000485275 VAV2P52735 878 aa15.48■□□□□ 0.07
LRIF1-202ENST00000485275 BPIFB4P59827 614 aa15.48■□□□□ 0.07
LRIF1-202ENST00000485275 PSMC1P62191 440 aaKnown RBP15.48■□□□□ 0.07
LRIF1-202ENST00000485275 DPH6Q7L8W6 267 aa15.48■□□□□ 0.07
LRIF1-202ENST00000485275 SALL4Q9UJQ4 1053 aa15.48■□□□□ 0.07
LRIF1-202ENST00000485275 DUSP10Q9Y6W6 482 aa15.48■□□□□ 0.07
LRIF1-202ENST00000485275 NLRC5Q86WI3 1866 aa15.47■□□□□ 0.07
LRIF1-202ENST00000485275 A8MXQ7 604 aa15.47■□□□□ 0.07
LRIF1-202ENST00000485275 O00370 1275 aa15.47■□□□□ 0.07
LRIF1-202ENST00000485275 TNRC18O15417 2968 aaPredicted RBP15.47■□□□□ 0.07
LRIF1-202ENST00000485275 CYP1A1P04798 512 aaPredicted RBP15.47■□□□□ 0.07
LRIF1-202ENST00000485275 CYP11A1P05108 521 aa15.47■□□□□ 0.07
LRIF1-202ENST00000485275 LINC00271P0C7V0 271 aa15.47■□□□□ 0.07
LRIF1-202ENST00000485275 CD19P15391 556 aa15.47■□□□□ 0.07
LRIF1-202ENST00000485275 NOMO3P69849 1222 aa15.47■□□□□ 0.07
LRIF1-202ENST00000485275 CLEC16AQ2KHT3 1053 aa15.47■□□□□ 0.07
LRIF1-202ENST00000485275 CCDC122Q5T0U0 273 aa15.47■□□□□ 0.07
LRIF1-202ENST00000485275 PSRC1Q6PGN9 363 aaPredicted RBP15.47■□□□□ 0.07
LRIF1-202ENST00000485275 UNC93AQ86WB7 457 aa15.47■□□□□ 0.07
LRIF1-202ENST00000485275 ZNF677Q86XU0 584 aa15.47■□□□□ 0.07
LRIF1-202ENST00000485275 DPF3Q92784 378 aa15.47■□□□□ 0.07
LRIF1-202ENST00000485275 CYFIP2Q96F07 1278 aa15.47■□□□□ 0.07
LRIF1-202ENST00000485275 B3GALT6Q96L58 329 aa15.47■□□□□ 0.07
LRIF1-202ENST00000485275 VN1R3Q9BXE9 311 aa15.47■□□□□ 0.07
LRIF1-202ENST00000485275 GPR62Q9BZJ7 368 aa15.47■□□□□ 0.07
LRIF1-202ENST00000485275 FAM49BQ9NUQ9 324 aa15.47■□□□□ 0.07
LRIF1-202ENST00000485275 DDX43Q9NXZ2 648 aaKnown RBP15.47■□□□□ 0.07
LRIF1-202ENST00000485275 CHD7Q9P2D1 2997 aa15.47■□□□□ 0.07
LRIF1-202ENST00000485275 MRPL42Q9Y6G3 142 aaKnown RBP15.47■□□□□ 0.07
LRIF1-202ENST00000485275 GJB5O95377 273 aa15.47■□□□□ 0.07
LRIF1-202ENST00000485275 EFEMP2O95967 443 aa15.47■□□□□ 0.07
LRIF1-202ENST00000485275 ODC1P11926 461 aa15.47■□□□□ 0.07
LRIF1-202ENST00000485275 TKTP29401 623 aaKnown RBP15.47■□□□□ 0.07
LRIF1-202ENST00000485275 GNL1P36915 607 aaPredicted RBP15.47■□□□□ 0.07
LRIF1-202ENST00000485275 SPA17Q15506 151 aa15.47■□□□□ 0.07
LRIF1-202ENST00000485275 SMYD5Q6GMV2 418 aa15.47■□□□□ 0.07
LRIF1-202ENST00000485275 DENND1BQ6P3S1 775 aa15.47■□□□□ 0.07
LRIF1-202ENST00000485275 VPS36Q86VN1 386 aa15.47■□□□□ 0.07
LRIF1-202ENST00000485275 WDTC1Q8N5D0 677 aa15.47■□□□□ 0.07
LRIF1-202ENST00000485275 OR10T2Q8NGX3 314 aa15.47■□□□□ 0.07
LRIF1-202ENST00000485275 HERVK_113Q902F9 699 aa15.47■□□□□ 0.07
LRIF1-202ENST00000485275 TMEM175Q9BSA9 504 aa15.47■□□□□ 0.07
LRIF1-202ENST00000485275 IRX2Q9BZI1 471 aaPredicted RBP15.47■□□□□ 0.07
LRIF1-202ENST00000485275 LZTFL1Q9NQ48 299 aa15.47■□□□□ 0.07
LRIF1-202ENST00000485275 CYTH4Q9UIA0 394 aa15.47■□□□□ 0.07
LRIF1-202ENST00000485275 ADAM28Q9UKQ2 775 aa15.47■□□□□ 0.07
LRIF1-202ENST00000485275 PCDHGC3Q9UN70 934 aa15.47■□□□□ 0.07
LRIF1-202ENST00000485275 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.47■□□□□ 0.07
LRIF1-202ENST00000485275 FANCGO15287 622 aa15.46■□□□□ 0.07
LRIF1-202ENST00000485275 ZNF500O60304 480 aaPredicted RBP15.46■□□□□ 0.07
LRIF1-202ENST00000485275 CCDC130P13994 396 aa15.46■□□□□ 0.07
LRIF1-202ENST00000485275 MAGEA1P43355 309 aa15.46■□□□□ 0.07
LRIF1-202ENST00000485275 KRT83P78385 493 aa15.46■□□□□ 0.07
LRIF1-202ENST00000485275 HTRA4P83105 476 aaPredicted RBP15.46■□□□□ 0.07
LRIF1-202ENST00000485275 C2CD6Q53TS8 623 aa15.46■□□□□ 0.07
LRIF1-202ENST00000485275 PPP1R26Q5T8A7 1209 aaPredicted RBP15.46■□□□□ 0.07
LRIF1-202ENST00000485275 NAA35Q5VZE5 725 aa15.46■□□□□ 0.07
LRIF1-202ENST00000485275 CRYBG2Q8N1P7 616 aa15.46■□□□□ 0.07
LRIF1-202ENST00000485275 TTC39CQ8N584 583 aa15.46■□□□□ 0.07
LRIF1-202ENST00000485275 C1orf131Q8NDD1 294 aaKnown RBP15.46■□□□□ 0.07
LRIF1-202ENST00000485275 CPA5Q8WXQ8 436 aa15.46■□□□□ 0.07
LRIF1-202ENST00000485275 HEXIM2Q96MH2 286 aaKnown RBP15.46■□□□□ 0.07
LRIF1-202ENST00000485275 TMEM209Q96SK2 561 aa15.46■□□□□ 0.07
LRIF1-202ENST00000485275 ISCUQ9H1K1 167 aa15.46■□□□□ 0.07
LRIF1-202ENST00000485275 SNX25Q9H3E2 840 aa15.46■□□□□ 0.07
LRIF1-202ENST00000485275 CRTAC1Q9NQ79 661 aa15.46■□□□□ 0.07
LRIF1-202ENST00000485275 RNF216Q9NWF9 866 aaPredicted RBP15.46■□□□□ 0.07
LRIF1-202ENST00000485275 PCDHB8Q9UN66 801 aa15.46■□□□□ 0.07
LRIF1-202ENST00000485275 GBF1Q92538 1859 aa15.45■□□□□ 0.06
LRIF1-202ENST00000485275 CHD9Q3L8U1 2897 aa15.45■□□□□ 0.06
LRIF1-202ENST00000485275 PTPRDP23468 1912 aa15.45■□□□□ 0.06
LRIF1-202ENST00000485275 MICAL2O94851 1124 aa15.45■□□□□ 0.06
LRIF1-202ENST00000485275 VDRP11473 427 aa15.45■□□□□ 0.06
LRIF1-202ENST00000485275 GALCP54803 685 aa15.45■□□□□ 0.06
LRIF1-202ENST00000485275 CENPCQ03188 943 aa15.45■□□□□ 0.06
LRIF1-202ENST00000485275 C9orf50Q5SZB4 431 aa15.45■□□□□ 0.06
LRIF1-202ENST00000485275 RASIP1Q5U651 963 aa15.45■□□□□ 0.06
LRIF1-202ENST00000485275 TTC30AQ86WT1 665 aa15.45■□□□□ 0.06
LRIF1-202ENST00000485275 CMTR2Q8IYT2 770 aaKnown RBP15.45■□□□□ 0.06
LRIF1-202ENST00000485275 TMEM86AQ8N2M4 240 aa15.45■□□□□ 0.06
LRIF1-202ENST00000485275 B3GALNT2Q8NCR0 500 aa15.45■□□□□ 0.06
LRIF1-202ENST00000485275 ARHGEF26Q96DR7 871 aa15.45■□□□□ 0.06
LRIF1-202ENST00000485275 CHORDC1Q9UHD1 332 aaPredicted RBP15.45■□□□□ 0.06
LRIF1-202ENST00000485275 TSPAN16Q9UKR8 245 aa15.45■□□□□ 0.06
LRIF1-202ENST00000485275 FAN1Q9Y2M0 1017 aa15.45■□□□□ 0.06
LRIF1-202ENST00000485275 LCHNA4D1U4 455 aa15.44■□□□□ 0.06
LRIF1-202ENST00000485275 PJA2O43164 708 aa15.44■□□□□ 0.06
LRIF1-202ENST00000485275 ZSCAN12O43309 604 aa15.44■□□□□ 0.06
LRIF1-202ENST00000485275 ATMINO43313 823 aaPredicted RBP15.44■□□□□ 0.06
LRIF1-202ENST00000485275 TADA2AO75478 443 aa15.44■□□□□ 0.06
LRIF1-202ENST00000485275 IPO7O95373 1038 aaKnown RBP15.44■□□□□ 0.06
LRIF1-202ENST00000485275 ALDH2P05091 517 aa15.44■□□□□ 0.06
LRIF1-202ENST00000485275 CDH5P33151 784 aaPredicted RBP15.44■□□□□ 0.06
LRIF1-202ENST00000485275 BTG3Q14201 252 aaPredicted RBP15.44■□□□□ 0.06
LRIF1-202ENST00000485275 PKDCCQ504Y2 493 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms