RNA–Protein interactions for RNA: ENST00000485248.2

CAPN13-206, Transcript of calpain 13, humanhuman

TSL 3

Gene CAPN13, Length 710 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN13-206ENST00000485248 SMARCA5O60264 1052 aaPredicted RBP6.95□□□□□ -1.3
CAPN13-206ENST00000485248 CER1O95813 267 aa6.95□□□□□ -1.3
CAPN13-206ENST00000485248 HOXB1P14653 301 aaPredicted RBP6.95□□□□□ -1.3
CAPN13-206ENST00000485248 MX1P20591 662 aa6.95□□□□□ -1.3
CAPN13-206ENST00000485248 TNK2Q07912 1038 aa6.95□□□□□ -1.3
CAPN13-206ENST00000485248 ITGB3BPQ13352 177 aaPredicted RBP6.95□□□□□ -1.3
CAPN13-206ENST00000485248 PLD1Q13393 1074 aa6.95□□□□□ -1.3
CAPN13-206ENST00000485248 SF3A1Q15459 793 aaKnown RBP6.95□□□□□ -1.3
CAPN13-206ENST00000485248 UBE2SQ16763 222 aa6.95□□□□□ -1.3
CAPN13-206ENST00000485248 MTERF2Q49AM1 385 aa6.95□□□□□ -1.3
CAPN13-206ENST00000485248 OXLD1Q5BKU9 147 aa6.95□□□□□ -1.3
CAPN13-206ENST00000485248 SYCP2LQ5T4T6 812 aa6.95□□□□□ -1.3
CAPN13-206ENST00000485248 CCDC183Q5T5S1 534 aa6.95□□□□□ -1.3
CAPN13-206ENST00000485248 NOTUMQ6P988 496 aa6.95□□□□□ -1.3
CAPN13-206ENST00000485248 SLC36A4Q6YBV0 504 aa6.95□□□□□ -1.3
CAPN13-206ENST00000485248 MARCH9Q86YJ5 346 aa6.95□□□□□ -1.3
CAPN13-206ENST00000485248 ARID3BQ8IVW6 561 aaPredicted RBP6.95□□□□□ -1.3
CAPN13-206ENST00000485248 PDCL2Q8N4E4 241 aa6.95□□□□□ -1.3
CAPN13-206ENST00000485248 LINC01465Q8N7H1 131 aa6.95□□□□□ -1.3
CAPN13-206ENST00000485248 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.95□□□□□ -1.3
CAPN13-206ENST00000485248 ARMC2Q8NEN0 867 aa6.95□□□□□ -1.3
CAPN13-206ENST00000485248 SNIP1Q8TAD8 396 aaKnown RBP6.95□□□□□ -1.3
CAPN13-206ENST00000485248 ZNF461Q8TAF7 563 aa6.95□□□□□ -1.3
CAPN13-206ENST00000485248 KIAA1524Q8TCG1 905 aa6.95□□□□□ -1.3
CAPN13-206ENST00000485248 SLC7A3Q8WY07 619 aa6.95□□□□□ -1.3
CAPN13-206ENST00000485248 FGF11Q92914 225 aa6.95□□□□□ -1.3
CAPN13-206ENST00000485248 TMEM176AQ96HP8 235 aa6.95□□□□□ -1.3
CAPN13-206ENST00000485248 ZFP42Q96MM3 310 aa6.95□□□□□ -1.3
CAPN13-206ENST00000485248 FUCA2Q9BTY2 467 aa6.95□□□□□ -1.3
CAPN13-206ENST00000485248 SEMA4CQ9C0C4 833 aa6.95□□□□□ -1.3
CAPN13-206ENST00000485248 FAM124BQ9H5Z6 455 aaPredicted RBP6.95□□□□□ -1.3
CAPN13-206ENST00000485248 CNNM2Q9H8M5 875 aa6.95□□□□□ -1.3
CAPN13-206ENST00000485248 LRRC4CQ9HCJ2 640 aa6.95□□□□□ -1.3
CAPN13-206ENST00000485248 GPRC5CQ9NQ84 441 aa6.95□□□□□ -1.3
CAPN13-206ENST00000485248 TBC1D22BQ9NU19 505 aa6.95□□□□□ -1.3
CAPN13-206ENST00000485248 POLR3BQ9NW08 1133 aaPredicted RBP6.95□□□□□ -1.3
CAPN13-206ENST00000485248 OBP2AQ9NY56 170 aa6.95□□□□□ -1.3
CAPN13-206ENST00000485248 MTRRQ9UBK8 725 aa6.95□□□□□ -1.3
CAPN13-206ENST00000485248 PARP2Q9UGN5 583 aa6.95□□□□□ -1.3
CAPN13-206ENST00000485248 KIF3AQ9Y496 699 aa6.95□□□□□ -1.3
CAPN13-206ENST00000485248 INSL5Q9Y5Q6 135 aa6.95□□□□□ -1.3
CAPN13-206ENST00000485248 DNMT3AQ9Y6K1 912 aaPredicted RBP6.95□□□□□ -1.3
CAPN13-206ENST00000485248 COL6A6A6NMZ7 2263 aa6.95□□□□□ -1.3
CAPN13-206ENST00000485248 PTPN13Q12923 2485 aa6.95□□□□□ -1.3
CAPN13-206ENST00000485248 A0A1W2PQD8 194 aa6.94□□□□□ -1.3
CAPN13-206ENST00000485248 A0A1W2PRU2 124 aa6.94□□□□□ -1.3
CAPN13-206ENST00000485248 WDR64B1ANS9 1081 aa6.94□□□□□ -1.3
CAPN13-206ENST00000485248 FLRT2O43155 660 aa6.94□□□□□ -1.3
CAPN13-206ENST00000485248 ADAM12O43184 909 aa6.94□□□□□ -1.3
CAPN13-206ENST00000485248 TLX3O43711 291 aaPredicted RBP6.94□□□□□ -1.3
CAPN13-206ENST00000485248 MAFO75444 373 aaPredicted RBP6.94□□□□□ -1.3
CAPN13-206ENST00000485248 KIF4AO95239 1232 aa6.94□□□□□ -1.3
CAPN13-206ENST00000485248 FGF19O95750 216 aa6.94□□□□□ -1.3
CAPN13-206ENST00000485248 CCNE2O96020 404 aa6.94□□□□□ -1.3
CAPN13-206ENST00000485248 PRKCBP05771 671 aa6.94□□□□□ -1.3
CAPN13-206ENST00000485248 ATP4AP20648 1035 aa6.94□□□□□ -1.3
CAPN13-206ENST00000485248 ERCC5P28715 1186 aaPredicted RBP6.94□□□□□ -1.3
CAPN13-206ENST00000485248 CCR2P41597 374 aa6.94□□□□□ -1.3
CAPN13-206ENST00000485248 PDE1AP54750 535 aa6.94□□□□□ -1.3
CAPN13-206ENST00000485248 PRKCEQ02156 737 aa6.94□□□□□ -1.3
CAPN13-206ENST00000485248 CYP4A11Q02928 519 aa6.94□□□□□ -1.3
CAPN13-206ENST00000485248 TLE3Q04726 772 aa6.94□□□□□ -1.3
CAPN13-206ENST00000485248 TWF1Q12792 350 aa6.94□□□□□ -1.3
CAPN13-206ENST00000485248 TUSC3Q13454 348 aa6.94□□□□□ -1.3
CAPN13-206ENST00000485248 RUNX3Q13761 415 aa6.94□□□□□ -1.3
CAPN13-206ENST00000485248 INAVAQ3KP66 663 aa6.94□□□□□ -1.3
CAPN13-206ENST00000485248 PEAR1Q5VY43 1037 aaPredicted RBP6.94□□□□□ -1.3
CAPN13-206ENST00000485248 IL27RAQ6UWB1 636 aa6.94□□□□□ -1.3
CAPN13-206ENST00000485248 SRGAP1Q7Z6B7 1085 aa6.94□□□□□ -1.3
CAPN13-206ENST00000485248 TMPRSS12Q86WS5 348 aa6.94□□□□□ -1.3
CAPN13-206ENST00000485248 PLA2G4DQ86XP0 818 aa6.94□□□□□ -1.3
CAPN13-206ENST00000485248 CREBRFQ8IUR6 639 aa6.94□□□□□ -1.3
CAPN13-206ENST00000485248 SPACA3Q8IXA5 215 aa6.94□□□□□ -1.3
CAPN13-206ENST00000485248 CPA6Q8N4T0 437 aa6.94□□□□□ -1.3
CAPN13-206ENST00000485248 ZNF248Q8NDW4 579 aa6.94□□□□□ -1.3
CAPN13-206ENST00000485248 MDGA1Q8NFP4 955 aa6.94□□□□□ -1.3
CAPN13-206ENST00000485248 TPCN2Q8NHX9 752 aa6.94□□□□□ -1.3
CAPN13-206ENST00000485248 CTCFLQ8NI51 663 aaPredicted RBP6.94□□□□□ -1.3
CAPN13-206ENST00000485248 RLN3Q8WXF3 142 aa6.94□□□□□ -1.3
CAPN13-206ENST00000485248 CCDC51Q96ER9 411 aa6.94□□□□□ -1.3
CAPN13-206ENST00000485248 SPATA32Q96LK8 384 aa6.94□□□□□ -1.3
CAPN13-206ENST00000485248 ARHGAP9Q9BRR9 750 aa6.94□□□□□ -1.3
CAPN13-206ENST00000485248 ESYT1Q9BSJ8 1104 aa6.94□□□□□ -1.3
CAPN13-206ENST00000485248 ZNF577Q9BSK1 485 aa6.94□□□□□ -1.3
CAPN13-206ENST00000485248 CAPN10Q9HC96 672 aa6.94□□□□□ -1.3
CAPN13-206ENST00000485248 ATP6V1DQ9Y5K8 247 aa6.94□□□□□ -1.3
CAPN13-206ENST00000485248 TTC41PQ6P2S7 1318 aa6.94□□□□□ -1.3
CAPN13-206ENST00000485248 CACNA1EQ15878 2313 aa6.94□□□□□ -1.3
CAPN13-206ENST00000485248 ANKRD17O75179 2603 aaKnown RBP6.94□□□□□ -1.3
CAPN13-206ENST00000485248 ABCA7Q8IZY2 2146 aa6.94□□□□□ -1.3
CAPN13-206ENST00000485248 NUP210Q8TEM1 1887 aaPredicted RBP6.94□□□□□ -1.3
CAPN13-206ENST00000485248 H7C4K7 107 aa6.93□□□□□ -1.3
CAPN13-206ENST00000485248 FOXP2O15409 715 aa6.93□□□□□ -1.3
CAPN13-206ENST00000485248 MARCH6O60337 910 aa6.93□□□□□ -1.3
CAPN13-206ENST00000485248 AFPP02771 609 aaKnown RBP6.93□□□□□ -1.3
CAPN13-206ENST00000485248 ATXN1LP0C7T5 689 aaKnown RBP6.93□□□□□ -1.3
CAPN13-206ENST00000485248 ATF2P15336 505 aa6.93□□□□□ -1.3
CAPN13-206ENST00000485248 CR2P20023 1033 aa6.93□□□□□ -1.3
CAPN13-206ENST00000485248 AXLP30530 894 aa6.93□□□□□ -1.3
CAPN13-206ENST00000485248 P2RY2P41231 377 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 116.3 ms