RNA–Protein interactions for RNA: ENST00000485102.1

HDAC6-227, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-227ENST00000485102 TRAK2O60296 914 aa14.08□□□□□ -0.16
HDAC6-227ENST00000485102 ATG13O75143 517 aa14.08□□□□□ -0.16
HDAC6-227ENST00000485102 AKAP3O75969 853 aa14.08□□□□□ -0.16
HDAC6-227ENST00000485102 ATF6P18850 670 aa14.08□□□□□ -0.16
HDAC6-227ENST00000485102 DDX6P26196 483 aaKnown RBP eCLIP14.08□□□□□ -0.16
HDAC6-227ENST00000485102 RAP1GAPP47736 663 aa14.08□□□□□ -0.16
HDAC6-227ENST00000485102 SRSF5Q13243 272 aaKnown RBP14.08□□□□□ -0.16
HDAC6-227ENST00000485102 TMEM132DQ14C87 1099 aa14.08□□□□□ -0.16
HDAC6-227ENST00000485102 SLFN12LQ6IEE8 588 aa14.08□□□□□ -0.16
HDAC6-227ENST00000485102 NT5DC4Q86YG4 428 aa14.08□□□□□ -0.16
HDAC6-227ENST00000485102 CMTM8Q8IZV2 173 aa14.08□□□□□ -0.16
HDAC6-227ENST00000485102 THEM5Q8N1Q8 247 aa14.08□□□□□ -0.16
HDAC6-227ENST00000485102 MYCT1Q8N699 235 aa14.08□□□□□ -0.16
HDAC6-227ENST00000485102 GAB3Q8WWW8 586 aa14.08□□□□□ -0.16
HDAC6-227ENST00000485102 PLIN2Q99541 437 aa14.08□□□□□ -0.16
HDAC6-227ENST00000485102 MSTO1Q9BUK6 570 aa14.08□□□□□ -0.16
HDAC6-227ENST00000485102 GKN1Q9NS71 199 aa14.08□□□□□ -0.16
HDAC6-227ENST00000485102 BLOC1S4Q9NUP1 217 aa14.08□□□□□ -0.16
HDAC6-227ENST00000485102 TSC2P49815 1807 aa14.07□□□□□ -0.16
HDAC6-227ENST00000485102 GDF9O60383 454 aa14.07□□□□□ -0.16
HDAC6-227ENST00000485102 SOAT2O75908 522 aa14.07□□□□□ -0.16
HDAC6-227ENST00000485102 KRT37O76014 449 aa14.07□□□□□ -0.16
HDAC6-227ENST00000485102 FAM13AO94988 1023 aa14.07□□□□□ -0.16
HDAC6-227ENST00000485102 F11P03951 625 aa14.07□□□□□ -0.16
HDAC6-227ENST00000485102 NFICP08651 508 aa14.07□□□□□ -0.16
HDAC6-227ENST00000485102 ZNF806P0C7X5 589 aa14.07□□□□□ -0.16
HDAC6-227ENST00000485102 HAPLN1P10915 354 aaPredicted RBP14.07□□□□□ -0.16
HDAC6-227ENST00000485102 HMGA1P17096 107 aaKnown RBP14.07□□□□□ -0.16
HDAC6-227ENST00000485102 TAF6P49848 677 aa14.07□□□□□ -0.16
HDAC6-227ENST00000485102 AMPD2Q01433 879 aa14.07□□□□□ -0.16
HDAC6-227ENST00000485102 TNK2Q07912 1038 aa14.07□□□□□ -0.16
HDAC6-227ENST00000485102 RABEP1Q15276 862 aa14.07□□□□□ -0.16
HDAC6-227ENST00000485102 SLC39A12Q504Y0 691 aa14.07□□□□□ -0.16
HDAC6-227ENST00000485102 CEP68Q76N32 757 aa14.07□□□□□ -0.16
HDAC6-227ENST00000485102 CACNA2D4Q7Z3S7 1137 aa14.07□□□□□ -0.16
HDAC6-227ENST00000485102 TMEM150AQ86TG1 271 aa14.07□□□□□ -0.16
HDAC6-227ENST00000485102 LRRTM3Q86VH5 581 aa14.07□□□□□ -0.16
HDAC6-227ENST00000485102 GPBP1Q86WP2 473 aa14.07□□□□□ -0.16
HDAC6-227ENST00000485102 METTL23Q86XA0 190 aa14.07□□□□□ -0.16
HDAC6-227ENST00000485102 GPIHBP1Q8IV16 184 aa14.07□□□□□ -0.16
HDAC6-227ENST00000485102 CAMKK1Q8N5S9 505 aa14.07□□□□□ -0.16
HDAC6-227ENST00000485102 CALML4Q96GE6 196 aa14.07□□□□□ -0.16
HDAC6-227ENST00000485102 ZC3H10Q96K80 434 aaKnown RBP14.07□□□□□ -0.16
HDAC6-227ENST00000485102 GCNAQ96QF7 691 aa14.07□□□□□ -0.16
HDAC6-227ENST00000485102 LPIN3Q9BQK8 851 aa14.07□□□□□ -0.16
HDAC6-227ENST00000485102 KIF9Q9HAQ2 790 aa14.07□□□□□ -0.16
HDAC6-227ENST00000485102 PCDHGA5Q9Y5G8 931 aa14.07□□□□□ -0.16
HDAC6-227ENST00000485102 USP24Q9UPU5 2620 aa14.07□□□□□ -0.16
HDAC6-227ENST00000485102 ZNF638Q14966 1978 aaKnown RBP14.06□□□□□ -0.16
HDAC6-227ENST00000485102 K7ENM7 598 aa14.06□□□□□ -0.16
HDAC6-227ENST00000485102 CYB561D2O14569 222 aa14.06□□□□□ -0.16
HDAC6-227ENST00000485102 EXTL3O43909 919 aa14.06□□□□□ -0.16
HDAC6-227ENST00000485102 EPN2O95208 641 aa14.06□□□□□ -0.16
HDAC6-227ENST00000485102 UBA7P41226 1012 aa14.06□□□□□ -0.16
HDAC6-227ENST00000485102 NLRP12P59046 1061 aa14.06□□□□□ -0.16
HDAC6-227ENST00000485102 CYP4F8P98187 520 aa14.06□□□□□ -0.16
HDAC6-227ENST00000485102 GRSF1Q12849 480 aaKnown RBP eCLIP14.06□□□□□ -0.16
HDAC6-227ENST00000485102 RUNX3Q13761 415 aa14.06□□□□□ -0.16
HDAC6-227ENST00000485102 ZNF268Q14587 947 aaPredicted RBP14.06□□□□□ -0.16
HDAC6-227ENST00000485102 MGAT5BQ3V5L5 792 aa14.06□□□□□ -0.16
HDAC6-227ENST00000485102 HEATR6Q6AI08 1181 aaKnown RBP14.06□□□□□ -0.16
HDAC6-227ENST00000485102 MCTP1Q6DN14 999 aa14.06□□□□□ -0.16
HDAC6-227ENST00000485102 DCP1BQ8IZD4 617 aaKnown RBP14.06□□□□□ -0.16
HDAC6-227ENST00000485102 LRRC15Q8TF66 581 aa14.06□□□□□ -0.16
HDAC6-227ENST00000485102 CHFRQ96EP1 664 aa14.06□□□□□ -0.16
HDAC6-227ENST00000485102 SEPT5Q99719 369 aaPredicted RBP14.06□□□□□ -0.16
HDAC6-227ENST00000485102 HPS4Q9NQG7 708 aa14.06□□□□□ -0.16
HDAC6-227ENST00000485102 TDP1Q9NUW8 608 aa14.06□□□□□ -0.16
HDAC6-227ENST00000485102 DPP3Q9NY33 737 aa14.06□□□□□ -0.16
HDAC6-227ENST00000485102 ANKRD63C9JTQ0 380 aa14.05□□□□□ -0.16
HDAC6-227ENST00000485102 BMP15O95972 392 aa14.05□□□□□ -0.16
HDAC6-227ENST00000485102 LONP1P36776 959 aaKnown RBP14.05□□□□□ -0.16
HDAC6-227ENST00000485102 ACOT2P49753 483 aa14.05□□□□□ -0.16
HDAC6-227ENST00000485102 TAF12Q16514 161 aa14.05□□□□□ -0.16
HDAC6-227ENST00000485102 NFE2Q16621 373 aaPredicted RBP14.05□□□□□ -0.16
HDAC6-227ENST00000485102 FBXO43Q4G163 708 aa14.05□□□□□ -0.16
HDAC6-227ENST00000485102 PLA2G2CQ5R387 149 aa14.05□□□□□ -0.16
HDAC6-227ENST00000485102 WSCD1Q658N2 575 aa14.05□□□□□ -0.16
HDAC6-227ENST00000485102 ADALQ6DHV7 355 aa14.05□□□□□ -0.16
HDAC6-227ENST00000485102 FSTL4Q6MZW2 842 aa14.05□□□□□ -0.16
HDAC6-227ENST00000485102 CRELD2Q6UXH1 353 aaPredicted RBP14.05□□□□□ -0.16
HDAC6-227ENST00000485102 MON1AQ86VX9 555 aa14.05□□□□□ -0.16
HDAC6-227ENST00000485102 TTC8Q8TAM2 541 aa14.05□□□□□ -0.16
HDAC6-227ENST00000485102 LEO1Q8WVC0 666 aaPredicted RBP14.05□□□□□ -0.16
HDAC6-227ENST00000485102 RAD54LQ92698 747 aa14.05□□□□□ -0.16
HDAC6-227ENST00000485102 USP13Q92995 863 aaPredicted RBP14.05□□□□□ -0.16
HDAC6-227ENST00000485102 FAM212AQ96EL1 285 aa14.05□□□□□ -0.16
HDAC6-227ENST00000485102 PYM1Q9BRP8 204 aaKnown RBP14.05□□□□□ -0.16
HDAC6-227ENST00000485102 AGO2Q9UKV8 859 aaKnown RBP14.05□□□□□ -0.16
HDAC6-227ENST00000485102 TCHHQ07283 1943 aa14.04□□□□□ -0.16
HDAC6-227ENST00000485102 OTOL1A6NHN0 477 aaPredicted RBP14.04□□□□□ -0.16
HDAC6-227ENST00000485102 KPNA7A9QM74 516 aa14.04□□□□□ -0.16
HDAC6-227ENST00000485102 RPP40O75818 363 aaKnown RBP14.04□□□□□ -0.16
HDAC6-227ENST00000485102 CSH1P0DML2 217 aa14.04□□□□□ -0.16
HDAC6-227ENST00000485102 CSH2P0DML3 217 aa14.04□□□□□ -0.16
HDAC6-227ENST00000485102 DRD1P21728 446 aa14.04□□□□□ -0.16
HDAC6-227ENST00000485102 HOXC13P31276 330 aa14.04□□□□□ -0.16
HDAC6-227ENST00000485102 DDIT3P35638 169 aa14.04□□□□□ -0.16
HDAC6-227ENST00000485102 AVPR1AP37288 418 aa14.04□□□□□ -0.16
HDAC6-227ENST00000485102 PNPLA4P41247 253 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms