RNA–Protein interactions for RNA: ENST00000485024.1

VPS8-223, Transcript of VPS8, CORVET complex subunit, human

TSL 2

Gene VPS8, Length 477 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VPS8-223	ENST00000485024	GAST	P01350	101 aa		4.76	□□□□□ -1.65
VPS8-223	ENST00000485024	ALDH2	P05091	517 aa		4.76	□□□□□ -1.65
VPS8-223	ENST00000485024	FTH1P19	P0C7X4	201 aa		4.76	□□□□□ -1.65
VPS8-223	ENST00000485024	ZKSCAN1	P17029	563 aa	Predicted RBP	4.76	□□□□□ -1.65
VPS8-223	ENST00000485024	EDNRB	P24530	442 aa		4.76	□□□□□ -1.65
VPS8-223	ENST00000485024	HK3	P52790	923 aa		4.76	□□□□□ -1.65
VPS8-223	ENST00000485024	PER3	P56645	1201 aa		4.76	□□□□□ -1.65
VPS8-223	ENST00000485024	WNT3A	P56704	352 aa		4.76	□□□□□ -1.65
VPS8-223	ENST00000485024	NHLH2	Q02577	135 aa		4.76	□□□□□ -1.65
VPS8-223	ENST00000485024	FGL2	Q14314	439 aa		4.76	□□□□□ -1.65
VPS8-223	ENST00000485024	CNN3	Q15417	329 aa	Known RBP	4.76	□□□□□ -1.65
VPS8-223	ENST00000485024	ATP2B3	Q16720	1220 aa		4.76	□□□□□ -1.65
VPS8-223	ENST00000485024	C4orf46	Q504U0	113 aa		4.76	□□□□□ -1.65
VPS8-223	ENST00000485024	C10orf62	Q5T681	223 aa	Predicted RBP	4.76	□□□□□ -1.65
VPS8-223	ENST00000485024	SRL	Q86TD4	932 aa		4.76	□□□□□ -1.65
VPS8-223	ENST00000485024	RSPH3	Q86UC2	560 aa		4.76	□□□□□ -1.65
VPS8-223	ENST00000485024	MYLK4	Q86YV6	388 aa	Predicted RBP	4.76	□□□□□ -1.65
VPS8-223	ENST00000485024	PPP1R35	Q8TAP8	253 aa		4.76	□□□□□ -1.65
VPS8-223	ENST00000485024	ZC3H10	Q96K80	434 aa	Known RBP	4.76	□□□□□ -1.65
VPS8-223	ENST00000485024	CCDC138	Q96M89	665 aa		4.76	□□□□□ -1.65
VPS8-223	ENST00000485024	UIMC1	Q96RL1	719 aa		4.76	□□□□□ -1.65
VPS8-223	ENST00000485024	PLCB1	Q9NQ66	1216 aa		4.76	□□□□□ -1.65
VPS8-223	ENST00000485024	SLTM	Q9NWH9	1034 aa	Known RBP eCLIP	4.76	□□□□□ -1.65
VPS8-223	ENST00000485024	MTMR4	Q9NYA4	1195 aa		4.76	□□□□□ -1.65
VPS8-223	ENST00000485024	ARPP21	Q9UBL0	812 aa	Predicted RBP	4.76	□□□□□ -1.65
VPS8-223	ENST00000485024	TPCN1	Q9ULQ1	816 aa		4.76	□□□□□ -1.65
VPS8-223	ENST00000485024	DAAM1	Q9Y4D1	1078 aa		4.76	□□□□□ -1.65
VPS8-223	ENST00000485024	STRC	Q7RTU9	1775 aa		4.76	□□□□□ -1.65
VPS8-223	ENST00000485024		A0A1W2PR48	441 aa		4.75	□□□□□ -1.65
VPS8-223	ENST00000485024	CFAP69	A5D8W1	941 aa		4.75	□□□□□ -1.65
VPS8-223	ENST00000485024	HMGB1P1	B2RPK0	211 aa	Predicted RBP	4.75	□□□□□ -1.65
VPS8-223	ENST00000485024	PHGDH	O43175	533 aa	Known RBP	4.75	□□□□□ -1.65
VPS8-223	ENST00000485024	CTSS	P25774	331 aa		4.75	□□□□□ -1.65
VPS8-223	ENST00000485024	TM4SF4	P48230	202 aa		4.75	□□□□□ -1.65
VPS8-223	ENST00000485024	LONRF1	Q17RB8	773 aa		4.75	□□□□□ -1.65
VPS8-223	ENST00000485024	C3orf36	Q3SXR2	165 aa		4.75	□□□□□ -1.65
VPS8-223	ENST00000485024	TAS1R1	Q7RTX1	841 aa		4.75	□□□□□ -1.65
VPS8-223	ENST00000485024	RHOT1	Q8IXI2	618 aa		4.75	□□□□□ -1.65
VPS8-223	ENST00000485024	NSUN6	Q8TEA1	469 aa	Known RBP	4.75	□□□□□ -1.65
VPS8-223	ENST00000485024	ZNF480	Q8WV37	535 aa		4.75	□□□□□ -1.65
VPS8-223	ENST00000485024	SNX33	Q8WV41	574 aa		4.75	□□□□□ -1.65
VPS8-223	ENST00000485024	PPM1E	Q8WY54	764 aa		4.75	□□□□□ -1.65
VPS8-223	ENST00000485024	SUCLG2	Q96I99	432 aa		4.75	□□□□□ -1.65
VPS8-223	ENST00000485024	ALOXE3	Q9BYJ1	711 aa		4.75	□□□□□ -1.65
VPS8-223	ENST00000485024	BCO1	Q9HAY6	547 aa		4.75	□□□□□ -1.65
VPS8-223	ENST00000485024	ARFGAP3	Q9NP61	516 aa		4.75	□□□□□ -1.65
VPS8-223	ENST00000485024	GNL3L	Q9NVN8	582 aa	Known RBP	4.75	□□□□□ -1.65
VPS8-223	ENST00000485024	ASB6	Q9NWX5	421 aa		4.75	□□□□□ -1.65
VPS8-223	ENST00000485024	PADI4	Q9UM07	663 aa		4.75	□□□□□ -1.65
VPS8-223	ENST00000485024	DMTF1	Q9Y222	760 aa		4.75	□□□□□ -1.65
VPS8-223	ENST00000485024	NR2E3	Q9Y5X4	410 aa		4.75	□□□□□ -1.65
VPS8-223	ENST00000485024	KIF21B	O75037	1637 aa		4.75	□□□□□ -1.65
VPS8-223	ENST00000485024	CACNA1I	Q9P0X4	2223 aa		4.74	□□□□□ -1.65
VPS8-223	ENST00000485024		A6NNZ2	444 aa		4.74	□□□□□ -1.65
VPS8-223	ENST00000485024	RHPN2P1	A8MT19	583 aa		4.74	□□□□□ -1.65
VPS8-223	ENST00000485024	ISM1	B1AKI9	464 aa		4.74	□□□□□ -1.65
VPS8-223	ENST00000485024	PRR23D1	E9PI22	279 aa	Predicted RBP	4.74	□□□□□ -1.65
VPS8-223	ENST00000485024	TEX33	O43247	280 aa		4.74	□□□□□ -1.65
VPS8-223	ENST00000485024	PRAMEF4	O60810	478 aa		4.74	□□□□□ -1.65
VPS8-223	ENST00000485024	LY86	O95711	162 aa		4.74	□□□□□ -1.65
VPS8-223	ENST00000485024	PRR23D2	P0DMB1	279 aa	Predicted RBP	4.74	□□□□□ -1.65
VPS8-223	ENST00000485024	FDXR	P22570	491 aa		4.74	□□□□□ -1.65
VPS8-223	ENST00000485024	SMARCA1	P28370	1054 aa		4.74	□□□□□ -1.65
VPS8-223	ENST00000485024	CRHR1	P34998	444 aa		4.74	□□□□□ -1.65
VPS8-223	ENST00000485024	FXR1	P51114	621 aa	Known RBP eCLIP	4.74	□□□□□ -1.65
VPS8-223	ENST00000485024	ALDH5A1	P51649	535 aa	Predicted RBP	4.74	□□□□□ -1.65
VPS8-223	ENST00000485024	MAP2K6	P52564	334 aa		4.74	□□□□□ -1.65
VPS8-223	ENST00000485024	FOXG1	P55316	489 aa	Predicted RBP	4.74	□□□□□ -1.65
VPS8-223	ENST00000485024	RAB1A	P62820	205 aa		4.74	□□□□□ -1.65
VPS8-223	ENST00000485024	PPP3CA	Q08209	521 aa		4.74	□□□□□ -1.65
VPS8-223	ENST00000485024	NOG	Q13253	232 aa		4.74	□□□□□ -1.65
VPS8-223	ENST00000485024	RAPGEF1	Q13905	1077 aa		4.74	□□□□□ -1.65
VPS8-223	ENST00000485024	EZH2	Q15910	746 aa	Known RBP	4.74	□□□□□ -1.65
VPS8-223	ENST00000485024	C1orf228	Q6PIY5	440 aa		4.74	□□□□□ -1.65
VPS8-223	ENST00000485024	GADL1	Q6ZQY3	521 aa		4.74	□□□□□ -1.65
VPS8-223	ENST00000485024	PDZD4	Q76G19	769 aa	Predicted RBP	4.74	□□□□□ -1.65
VPS8-223	ENST00000485024	DOK3	Q7L591	496 aa		4.74	□□□□□ -1.65
VPS8-223	ENST00000485024	DEPTOR	Q8TB45	409 aa		4.74	□□□□□ -1.65
VPS8-223	ENST00000485024	DPF2	Q92785	391 aa		4.74	□□□□□ -1.65
VPS8-223	ENST00000485024	APIP	Q96GX9	242 aa		4.74	□□□□□ -1.65
VPS8-223	ENST00000485024		Q96MF0	132 aa		4.74	□□□□□ -1.65
VPS8-223	ENST00000485024	UHRF1	Q96T88	793 aa	Predicted RBP	4.74	□□□□□ -1.65
VPS8-223	ENST00000485024	FDXACB1	Q9BRP7	624 aa	Predicted RBP	4.74	□□□□□ -1.65
VPS8-223	ENST00000485024	NAA15	Q9BXJ9	866 aa	Known RBP	4.74	□□□□□ -1.65
VPS8-223	ENST00000485024	EPC1	Q9H2F5	836 aa		4.74	□□□□□ -1.65
VPS8-223	ENST00000485024	WDCP	Q9H6R7	721 aa		4.74	□□□□□ -1.65
VPS8-223	ENST00000485024	SARS2	Q9NP81	518 aa	Known RBP	4.74	□□□□□ -1.65
VPS8-223	ENST00000485024	LMBRD1	Q9NUN5	540 aa		4.74	□□□□□ -1.65
VPS8-223	ENST00000485024	TMEM140	Q9NV12	185 aa		4.74	□□□□□ -1.65
VPS8-223	ENST00000485024	FEZ2	Q9UHY8	353 aa	Predicted RBP	4.74	□□□□□ -1.65
VPS8-223	ENST00000485024	PAXBP1	Q9Y5B6	917 aa		4.74	□□□□□ -1.65
VPS8-223	ENST00000485024	PLB1	Q6P1J6	1458 aa		4.74	□□□□□ -1.65
VPS8-223	ENST00000485024	CDK12	Q9NYV4	1490 aa	Predicted RBP	4.74	□□□□□ -1.65
VPS8-223	ENST00000485024	GLI2	P10070	1586 aa		4.74	□□□□□ -1.65
VPS8-223	ENST00000485024		A0A1W2PPL8	197 aa		4.73	□□□□□ -1.65
VPS8-223	ENST00000485024		H3BUI4	141 aa		4.73	□□□□□ -1.65
VPS8-223	ENST00000485024	NRP1	O14786	923 aa		4.73	□□□□□ -1.65
VPS8-223	ENST00000485024	TCEA3	O75764	348 aa		4.73	□□□□□ -1.65
VPS8-223	ENST00000485024	MYL3	P08590	195 aa		4.73	□□□□□ -1.65
VPS8-223	ENST00000485024	MYB	P10242	640 aa		4.73	□□□□□ -1.65

Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms