RNA–Protein interactions for RNA: ENST00000484954.1

VPS50-216, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-216ENST00000484954 TSTD2Q5T7W7 516 aa4.21□□□□□ -1.74
VPS50-216ENST00000484954 AMIGO2Q86SJ2 522 aa4.21□□□□□ -1.74
VPS50-216ENST00000484954 FAM46DQ8NEK8 389 aa4.21□□□□□ -1.74
VPS50-216ENST00000484954 RFKQ969G6 155 aa4.21□□□□□ -1.74
VPS50-216ENST00000484954 PGBD1Q96JS3 809 aa4.21□□□□□ -1.74
VPS50-216ENST00000484954 UROC1Q96N76 676 aa4.21□□□□□ -1.74
VPS50-216ENST00000484954 HEPHQ9BQS7 1158 aa4.21□□□□□ -1.74
VPS50-216ENST00000484954 ACTRT3Q9BYD9 372 aa4.21□□□□□ -1.74
VPS50-216ENST00000484954 TCF7L1Q9HCS4 588 aa4.21□□□□□ -1.74
VPS50-216ENST00000484954 SERHLQ9NQF3 203 aa4.21□□□□□ -1.74
VPS50-216ENST00000484954 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.21□□□□□ -1.74
VPS50-216ENST00000484954 GNL3LQ9NVN8 582 aaKnown RBP4.21□□□□□ -1.74
VPS50-216ENST00000484954 ENTPD2Q9Y5L3 495 aa4.21□□□□□ -1.74
VPS50-216ENST00000484954 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.2□□□□□ -1.74
VPS50-216ENST00000484954 WIPF3A6NGB9 483 aa4.2□□□□□ -1.74
VPS50-216ENST00000484954 DCLK1O15075 740 aa4.2□□□□□ -1.74
VPS50-216ENST00000484954 DNAJB5O75953 348 aa4.2□□□□□ -1.74
VPS50-216ENST00000484954 ARIH2O95376 493 aa4.2□□□□□ -1.74
VPS50-216ENST00000484954 CHEK2O96017 543 aa4.2□□□□□ -1.74
VPS50-216ENST00000484954 C1RP00736 705 aa4.2□□□□□ -1.74
VPS50-216ENST00000484954 EXOSC10Q01780 885 aaKnown RBP4.2□□□□□ -1.74
VPS50-216ENST00000484954 SP2Q02086 613 aa4.2□□□□□ -1.74
VPS50-216ENST00000484954 NHLH1Q02575 133 aa4.2□□□□□ -1.74
VPS50-216ENST00000484954 THEMIS2Q5TEJ8 643 aa4.2□□□□□ -1.74
VPS50-216ENST00000484954 GRAMD1CQ8IYS0 662 aa4.2□□□□□ -1.74
VPS50-216ENST00000484954 FAM109AQ8N4B1 249 aa4.2□□□□□ -1.74
VPS50-216ENST00000484954 PCSK9Q8NBP7 692 aaKnown RBP4.2□□□□□ -1.74
VPS50-216ENST00000484954 HPS3Q969F9 1004 aa4.2□□□□□ -1.74
VPS50-216ENST00000484954 SLC35A4Q96G79 324 aa4.2□□□□□ -1.74
VPS50-216ENST00000484954 RTFDC1Q9BY42 306 aaPredicted RBP4.2□□□□□ -1.74
VPS50-216ENST00000484954 RHOBTB2Q9BYZ6 727 aa4.2□□□□□ -1.74
VPS50-216ENST00000484954 TPSD1Q9BZJ3 242 aa4.2□□□□□ -1.74
VPS50-216ENST00000484954 SLC12A5Q9H2X9 1139 aa4.2□□□□□ -1.74
VPS50-216ENST00000484954 ARMT1Q9H993 441 aa4.2□□□□□ -1.74
VPS50-216ENST00000484954 KLC4Q9NSK0 619 aa4.2□□□□□ -1.74
VPS50-216ENST00000484954 PNPOQ9NVS9 261 aa4.2□□□□□ -1.74
VPS50-216ENST00000484954 ZDHHC8Q9ULC8 765 aa4.2□□□□□ -1.74
VPS50-216ENST00000484954 PCDHA6Q9UN73 950 aa4.2□□□□□ -1.74
VPS50-216ENST00000484954 SPATA31A3Q5VYP0 1347 aa4.2□□□□□ -1.74
VPS50-216ENST00000484954 PROB1E7EW31 1015 aa4.19□□□□□ -1.74
VPS50-216ENST00000484954 H3BUI4 141 aa4.19□□□□□ -1.74
VPS50-216ENST00000484954 ALDH1L1O75891 902 aa4.19□□□□□ -1.74
VPS50-216ENST00000484954 NR2F6P10588 404 aa4.19□□□□□ -1.74
VPS50-216ENST00000484954 PIM1P11309 404 aaPredicted RBP4.19□□□□□ -1.74
VPS50-216ENST00000484954 GCLCP48506 637 aaPredicted RBP4.19□□□□□ -1.74
VPS50-216ENST00000484954 NXPH1P58417 271 aa4.19□□□□□ -1.74
VPS50-216ENST00000484954 ITIH3Q06033 890 aa4.19□□□□□ -1.74
VPS50-216ENST00000484954 MCL1Q07820 350 aa4.19□□□□□ -1.74
VPS50-216ENST00000484954 EIF2B5Q13144 721 aaKnown RBP4.19□□□□□ -1.74
VPS50-216ENST00000484954 KRTAP5-1Q6L8H4 278 aa4.19□□□□□ -1.74
VPS50-216ENST00000484954 TMEM108Q6UXF1 575 aa4.19□□□□□ -1.74
VPS50-216ENST00000484954 ZNF788Q6ZQV5 615 aa4.19□□□□□ -1.74
VPS50-216ENST00000484954 COL23A1Q86Y22 540 aaPredicted RBP4.19□□□□□ -1.74
VPS50-216ENST00000484954 RASAL3Q86YV0 1011 aa4.19□□□□□ -1.74
VPS50-216ENST00000484954 FAM177A1Q8N128 213 aaPredicted RBP4.19□□□□□ -1.74
VPS50-216ENST00000484954 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.19□□□□□ -1.74
VPS50-216ENST00000484954 CAMKK1Q8N5S9 505 aa4.19□□□□□ -1.74
VPS50-216ENST00000484954 FKBP10Q96AY3 582 aa4.19□□□□□ -1.74
VPS50-216ENST00000484954 SARAFQ96BY9 339 aa4.19□□□□□ -1.74
VPS50-216ENST00000484954 SLC46A1Q96NT5 459 aa4.19□□□□□ -1.74
VPS50-216ENST00000484954 OSBPL9Q96SU4 736 aa4.19□□□□□ -1.74
VPS50-216ENST00000484954 CGRRF1Q99675 332 aa4.19□□□□□ -1.74
VPS50-216ENST00000484954 TIMP4Q99727 224 aa4.19□□□□□ -1.74
VPS50-216ENST00000484954 STAP2Q9UGK3 403 aa4.19□□□□□ -1.74
VPS50-216ENST00000484954 RAD54BQ9Y620 910 aa4.19□□□□□ -1.74
VPS50-216ENST00000484954 CGB1A6NKQ9 187 aa4.18□□□□□ -1.74
VPS50-216ENST00000484954 PPM1DO15297 605 aa4.18□□□□□ -1.74
VPS50-216ENST00000484954 TRIAP1O43715 76 aa4.18□□□□□ -1.74
VPS50-216ENST00000484954 URI1O94763 535 aaPredicted RBP4.18□□□□□ -1.74
VPS50-216ENST00000484954 UNC5CO95185 931 aa4.18□□□□□ -1.74
VPS50-216ENST00000484954 JUPP14923 745 aa4.18□□□□□ -1.74
VPS50-216ENST00000484954 WT1P19544 449 aaPredicted RBP4.18□□□□□ -1.74
VPS50-216ENST00000484954 ITGALP20701 1170 aa4.18□□□□□ -1.74
VPS50-216ENST00000484954 AKAP5P24588 427 aa4.18□□□□□ -1.74
VPS50-216ENST00000484954 CD6P30203 668 aa4.18□□□□□ -1.74
VPS50-216ENST00000484954 SOX8P57073 446 aa4.18□□□□□ -1.74
VPS50-216ENST00000484954 TTF1Q15361 905 aaPredicted RBP4.18□□□□□ -1.74
VPS50-216ENST00000484954 TBCCQ15814 346 aa4.18□□□□□ -1.74
VPS50-216ENST00000484954 CCDC157Q569K6 752 aa4.18□□□□□ -1.74
VPS50-216ENST00000484954 ATAT1Q5SQI0 421 aa4.18□□□□□ -1.74
VPS50-216ENST00000484954 GRASPQ7Z6J2 395 aaPredicted RBP4.18□□□□□ -1.74
VPS50-216ENST00000484954 KLHDC4Q8TBB5 520 aa4.18□□□□□ -1.74
VPS50-216ENST00000484954 DPF1Q92782 380 aa4.18□□□□□ -1.74
VPS50-216ENST00000484954 NELL1Q92832 810 aa4.18□□□□□ -1.74
VPS50-216ENST00000484954 FAM136AQ96C01 138 aa4.18□□□□□ -1.74
VPS50-216ENST00000484954 PBKQ96KB5 322 aa4.18□□□□□ -1.74
VPS50-216ENST00000484954 HAPLN3Q96S86 360 aa4.18□□□□□ -1.74
VPS50-216ENST00000484954 TTYH3Q9C0H2 523 aa4.18□□□□□ -1.74
VPS50-216ENST00000484954 KMT5AQ9NQR1 393 aa4.18□□□□□ -1.74
VPS50-216ENST00000484954 DDX56Q9NY93 547 aaKnown RBP4.18□□□□□ -1.74
VPS50-216ENST00000484954 HESX1Q9UBX0 185 aa4.18□□□□□ -1.74
VPS50-216ENST00000484954 CCDC151A5D8V7 595 aa4.17□□□□□ -1.74
VPS50-216ENST00000484954 MANSC4A6NHS7 340 aaPredicted RBP4.17□□□□□ -1.74
VPS50-216ENST00000484954 AKAP10O43572 662 aa4.17□□□□□ -1.74
VPS50-216ENST00000484954 AP1G1O43747 822 aa4.17□□□□□ -1.74
VPS50-216ENST00000484954 PROP1O75360 226 aa4.17□□□□□ -1.74
VPS50-216ENST00000484954 GNAI2P04899 355 aa4.17□□□□□ -1.74
VPS50-216ENST00000484954 PDGFRBP09619 1106 aa4.17□□□□□ -1.74
VPS50-216ENST00000484954 EBLN1P0CF75 366 aa4.17□□□□□ -1.74
VPS50-216ENST00000484954 MYBP10242 640 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms