RNA–Protein interactions for RNA: ENST00000484103.1

NDUFA3-213, Transcript of NADH:ubiquinone oxidoreductase subunit A3, humanhuman

TSL 1 (best)

Gene NDUFA3, Length 541 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3-213ENST00000484103 GPD1LQ8N335 351 aa20.68■□□□□ 0.9
NDUFA3-213ENST00000484103 TTC16Q8NEE8 873 aa20.68■□□□□ 0.9
NDUFA3-213ENST00000484103 CSGALNACT1Q8TDX6 532 aa20.68■□□□□ 0.9
NDUFA3-213ENST00000484103 CACTINQ8WUQ7 758 aaKnown RBP20.68■□□□□ 0.9
NDUFA3-213ENST00000484103 DEPDC1BQ8WUY9 529 aa20.68■□□□□ 0.9
NDUFA3-213ENST00000484103 DNASE1L2Q92874 299 aa20.68■□□□□ 0.9
NDUFA3-213ENST00000484103 GCNAQ96QF7 691 aa20.68■□□□□ 0.9
NDUFA3-213ENST00000484103 TRIM9Q9C026 710 aa20.68■□□□□ 0.9
NDUFA3-213ENST00000484103 TNMDQ9H2S6 317 aa20.68■□□□□ 0.9
NDUFA3-213ENST00000484103 L1RE1Q9UN81 338 aa20.68■□□□□ 0.9
NDUFA3-213ENST00000484103 SNX9Q9Y5X1 595 aa20.68■□□□□ 0.9
NDUFA3-213ENST00000484103 PTPRJQ12913 1337 aa20.68■□□□□ 0.9
NDUFA3-213ENST00000484103 SHISA7A6NL88 538 aa20.67■□□□□ 0.9
NDUFA3-213ENST00000484103 POLR2DO15514 142 aaKnown RBP20.67■□□□□ 0.9
NDUFA3-213ENST00000484103 HUS1O60921 280 aa20.67■□□□□ 0.9
NDUFA3-213ENST00000484103 PPP6R2O75170 966 aa20.67■□□□□ 0.9
NDUFA3-213ENST00000484103 LMNAP02545 664 aaKnown RBP20.67■□□□□ 0.9
NDUFA3-213ENST00000484103 ZSCAN22P10073 491 aaPredicted RBP20.67■□□□□ 0.9
NDUFA3-213ENST00000484103 PAX3P23760 479 aa20.67■□□□□ 0.9
NDUFA3-213ENST00000484103 CCNE1P24864 410 aa20.67■□□□□ 0.9
NDUFA3-213ENST00000484103 PNPLA4P41247 253 aa20.67■□□□□ 0.9
NDUFA3-213ENST00000484103 ME1P48163 572 aa20.67■□□□□ 0.9
NDUFA3-213ENST00000484103 TUFMP49411 452 aaKnown RBP20.67■□□□□ 0.9
NDUFA3-213ENST00000484103 KPNA1P52294 538 aaPredicted RBP20.67■□□□□ 0.9
NDUFA3-213ENST00000484103 TSPY1Q01534 308 aa20.67■□□□□ 0.9
NDUFA3-213ENST00000484103 ARHGAP15Q53QZ3 475 aa20.67■□□□□ 0.9
NDUFA3-213ENST00000484103 STXBP4Q6ZWJ1 553 aa20.67■□□□□ 0.9
NDUFA3-213ENST00000484103 MFSD6LQ8IWD5 586 aa20.67■□□□□ 0.9
NDUFA3-213ENST00000484103 DCP1BQ8IZD4 617 aaKnown RBP20.67■□□□□ 0.9
NDUFA3-213ENST00000484103 FAM3CQ92520 227 aa20.67■□□□□ 0.9
NDUFA3-213ENST00000484103 DDX43Q9NXZ2 648 aaKnown RBP20.67■□□□□ 0.9
NDUFA3-213ENST00000484103 MRPS17Q9Y2R5 130 aaKnown RBP20.67■□□□□ 0.9
NDUFA3-213ENST00000484103 R3HCC1Q9Y3T6 440 aaKnown RBP20.67■□□□□ 0.9
NDUFA3-213ENST00000484103 ASB3Q9Y575 518 aa20.67■□□□□ 0.9
NDUFA3-213ENST00000484103 NCAM2O15394 837 aa20.66■□□□□ 0.9
NDUFA3-213ENST00000484103 PRPF40AO75400 957 aaKnown RBP20.66■□□□□ 0.9
NDUFA3-213ENST00000484103 PRAMEF12O95522 483 aa20.66■□□□□ 0.9
NDUFA3-213ENST00000484103 YEATS4O95619 227 aa20.66■□□□□ 0.9
NDUFA3-213ENST00000484103 F13A1P00488 732 aa20.66■□□□□ 0.9
NDUFA3-213ENST00000484103 HAPLN1P10915 354 aaPredicted RBP20.66■□□□□ 0.9
NDUFA3-213ENST00000484103 AFMP43652 599 aa20.66■□□□□ 0.9
NDUFA3-213ENST00000484103 CYP2J2P51589 502 aa20.66■□□□□ 0.9
NDUFA3-213ENST00000484103 ZC3H14Q6PJT7 736 aaKnown RBP20.66■□□□□ 0.9
NDUFA3-213ENST00000484103 OSTM1Q86WC4 334 aa20.66■□□□□ 0.9
NDUFA3-213ENST00000484103 NT5DC4Q86YG4 428 aa20.66■□□□□ 0.9
NDUFA3-213ENST00000484103 GRAMD1CQ8IYS0 662 aa20.66■□□□□ 0.9
NDUFA3-213ENST00000484103 IQUBQ8NA54 791 aa20.66■□□□□ 0.9
NDUFA3-213ENST00000484103 OR5B17Q8NGF7 314 aa20.66■□□□□ 0.9
NDUFA3-213ENST00000484103 SNX21Q969T3 373 aa20.66■□□□□ 0.9
NDUFA3-213ENST00000484103 ANKRD36BP1Q96IX9 119 aa20.66■□□□□ 0.9
NDUFA3-213ENST00000484103 LRRC3BQ96PB8 259 aa20.66■□□□□ 0.9
NDUFA3-213ENST00000484103 MKNK1Q9BUB5 465 aa20.66■□□□□ 0.9
NDUFA3-213ENST00000484103 GPR88Q9GZN0 384 aa20.66■□□□□ 0.9
NDUFA3-213ENST00000484103 KBTBD4Q9NVX7 518 aa20.66■□□□□ 0.9
NDUFA3-213ENST00000484103 HSPBP1Q9NZL4 362 aa20.66■□□□□ 0.9
NDUFA3-213ENST00000484103 SIX4Q9UIU6 781 aa20.66■□□□□ 0.9
NDUFA3-213ENST00000484103 ITGA11Q9UKX5 1188 aa20.66■□□□□ 0.9
NDUFA3-213ENST00000484103 PCDHB5Q9Y5E4 795 aa20.66■□□□□ 0.9
NDUFA3-213ENST00000484103 MORC2Q9Y6X9 1032 aaPredicted RBP20.66■□□□□ 0.9
NDUFA3-213ENST00000484103 PATJQ8NI35 1801 aa20.65■□□□□ 0.9
NDUFA3-213ENST00000484103 CLIC2O15247 247 aa20.65■□□□□ 0.9
NDUFA3-213ENST00000484103 HOXD13P35453 343 aa20.65■□□□□ 0.9
NDUFA3-213ENST00000484103 MTAPQ13126 283 aa20.65■□□□□ 0.9
NDUFA3-213ENST00000484103 DDR2Q16832 855 aa20.65■□□□□ 0.9
NDUFA3-213ENST00000484103 ADGRF2Q8IZF7 708 aa20.65■□□□□ 0.9
NDUFA3-213ENST00000484103 SPPL2BQ8TCT7 592 aa20.65■□□□□ 0.9
NDUFA3-213ENST00000484103 OSBPL6Q9BZF3 934 aa20.65■□□□□ 0.9
NDUFA3-213ENST00000484103 LRRC27Q9C0I9 530 aa20.65■□□□□ 0.9
NDUFA3-213ENST00000484103 LMAN1LQ9HAT1 526 aa20.65■□□□□ 0.9
NDUFA3-213ENST00000484103 TRPV4Q9HBA0 871 aa20.65■□□□□ 0.9
NDUFA3-213ENST00000484103 GTF3C4Q9UKN8 822 aa20.65■□□□□ 0.9
NDUFA3-213ENST00000484103 COL4A2P08572 1712 aa20.64■□□□□ 0.9
NDUFA3-213ENST00000484103 ZNF233A6NK53 670 aa20.64■□□□□ 0.89
NDUFA3-213ENST00000484103 MAN2B1O00754 1011 aa20.64■□□□□ 0.89
NDUFA3-213ENST00000484103 CLSTN1O94985 981 aa20.64■□□□□ 0.89
NDUFA3-213ENST00000484103 TNNC2P02585 160 aa20.64■□□□□ 0.89
NDUFA3-213ENST00000484103 DLATP10515 647 aaKnown RBP20.64■□□□□ 0.89
NDUFA3-213ENST00000484103 CYP2F1P24903 491 aa20.64■□□□□ 0.89
NDUFA3-213ENST00000484103 RBP5P82980 135 aa20.64■□□□□ 0.89
NDUFA3-213ENST00000484103 AMPD3Q01432 767 aa20.64■□□□□ 0.89
NDUFA3-213ENST00000484103 POU5F1Q01860 360 aaKnown RBP20.64■□□□□ 0.89
NDUFA3-213ENST00000484103 FAM26FQ5R3K3 315 aa20.64■□□□□ 0.89
NDUFA3-213ENST00000484103 NELL2Q99435 816 aa20.64■□□□□ 0.89
NDUFA3-213ENST00000484103 IL21Q9HBE4 155 aa20.64■□□□□ 0.89
NDUFA3-213ENST00000484103 RBM12Q9NTZ6 932 aaKnown RBP20.64■□□□□ 0.89
NDUFA3-213ENST00000484103 GTSE1Q9NYZ3 720 aa20.64■□□□□ 0.89
NDUFA3-213ENST00000484103 KINO60870 393 aaKnown RBP20.63■□□□□ 0.89
NDUFA3-213ENST00000484103 FGF19O95750 216 aa20.63■□□□□ 0.89
NDUFA3-213ENST00000484103 CDC25CP30307 473 aa20.63■□□□□ 0.89
NDUFA3-213ENST00000484103 PSMC1P62191 440 aaKnown RBP20.63■□□□□ 0.89
NDUFA3-213ENST00000484103 MYL7Q01449 175 aa20.63■□□□□ 0.89
NDUFA3-213ENST00000484103 DNM1Q05193 864 aaKnown RBP20.63■□□□□ 0.89
NDUFA3-213ENST00000484103 TNK2Q07912 1038 aa20.63■□□□□ 0.89
NDUFA3-213ENST00000484103 FZD5Q13467 585 aa20.63■□□□□ 0.89
NDUFA3-213ENST00000484103 SCN4BQ8IWT1 228 aa20.63■□□□□ 0.89
NDUFA3-213ENST00000484103 KIAA2013Q8IYS2 634 aa20.63■□□□□ 0.89
NDUFA3-213ENST00000484103 DCLK2Q8N568 766 aa20.63■□□□□ 0.89
NDUFA3-213ENST00000484103 LRRC52Q8N7C0 313 aa20.63■□□□□ 0.89
NDUFA3-213ENST00000484103 MAB21L3Q8N8X9 362 aa20.63■□□□□ 0.89
NDUFA3-213ENST00000484103 CXorf38Q8TB03 319 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms