RNA–Protein interactions for RNA: ENST00000483956.1

SEC61A1-205, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 1 (best)

Gene SEC61A1, Length 3,046 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-205ENST00000483956 ZNF76P36508 570 aa12.17□□□□□ -0.46
SEC61A1-205ENST00000483956 GRM2Q14416 872 aa12.17□□□□□ -0.46
SEC61A1-205ENST00000483956 PLEKHG4Q58EX7 1191 aa12.17□□□□□ -0.46
SEC61A1-205ENST00000483956 ODR4Q5SWX8 454 aa12.17□□□□□ -0.46
SEC61A1-205ENST00000483956 SYDE1Q6ZW31 735 aaPredicted RBP12.17□□□□□ -0.46
SEC61A1-205ENST00000483956 ARHGEF19Q8IW93 802 aa12.17□□□□□ -0.46
SEC61A1-205ENST00000483956 TPH2Q8IWU9 490 aa12.17□□□□□ -0.46
SEC61A1-205ENST00000483956 ZBED8Q8IZ13 594 aa12.17□□□□□ -0.46
SEC61A1-205ENST00000483956 EPS8L1Q8TE68 723 aa12.17□□□□□ -0.46
SEC61A1-205ENST00000483956 SLC5A5Q92911 643 aa12.17□□□□□ -0.46
SEC61A1-205ENST00000483956 TBCCD1Q9NVR7 557 aa12.17□□□□□ -0.46
SEC61A1-205ENST00000483956 UBAP1Q9NZ09 502 aa12.17□□□□□ -0.46
SEC61A1-205ENST00000483956 NDUFA13Q9P0J0 144 aa12.17□□□□□ -0.46
SEC61A1-205ENST00000483956 GRID1Q9ULK0 1009 aa12.17□□□□□ -0.46
SEC61A1-205ENST00000483956 KANSL1LA0AUZ9 987 aa12.16□□□□□ -0.46
SEC61A1-205ENST00000483956 C6orf229H3BNL8 230 aa12.16□□□□□ -0.46
SEC61A1-205ENST00000483956 MAGEB2O15479 319 aa12.16□□□□□ -0.46
SEC61A1-205ENST00000483956 HNRNPCL1O60812 293 aaKnown RBP12.16□□□□□ -0.46
SEC61A1-205ENST00000483956 STK10O94804 968 aaKnown RBP12.16□□□□□ -0.46
SEC61A1-205ENST00000483956 CHRNB2P17787 502 aa12.16□□□□□ -0.46
SEC61A1-205ENST00000483956 COG7P83436 770 aa12.16□□□□□ -0.46
SEC61A1-205ENST00000483956 TBL3Q12788 808 aaKnown RBP12.16□□□□□ -0.46
SEC61A1-205ENST00000483956 TMEM63BQ5T3F8 832 aa12.16□□□□□ -0.46
SEC61A1-205ENST00000483956 THOC7Q6I9Y2 204 aaKnown RBP12.16□□□□□ -0.46
SEC61A1-205ENST00000483956 RNF207Q6ZRF8 634 aa12.16□□□□□ -0.46
SEC61A1-205ENST00000483956 SIAH1Q8IUQ4 282 aa12.16□□□□□ -0.46
SEC61A1-205ENST00000483956 C7orf43Q8WVR3 580 aa12.16□□□□□ -0.46
SEC61A1-205ENST00000483956 PRR11Q96HE9 360 aaPredicted RBP12.16□□□□□ -0.46
SEC61A1-205ENST00000483956 MAML3Q96JK9 1138 aa12.16□□□□□ -0.46
SEC61A1-205ENST00000483956 PRICKLE1Q96MT3 831 aaPredicted RBP12.16□□□□□ -0.46
SEC61A1-205ENST00000483956 NACC1Q96RE7 527 aa12.16□□□□□ -0.46
SEC61A1-205ENST00000483956 PCDHB18PQ96TA0 734 aa12.16□□□□□ -0.46
SEC61A1-205ENST00000483956 WDR18Q9BV38 432 aa12.16□□□□□ -0.46
SEC61A1-205ENST00000483956 TAS2R1Q9NYW7 299 aa12.16□□□□□ -0.46
SEC61A1-205ENST00000483956 UVRAGQ9P2Y5 699 aa12.16□□□□□ -0.46
SEC61A1-205ENST00000483956 DCTN4Q9UJW0 460 aa12.16□□□□□ -0.46
SEC61A1-205ENST00000483956 NAALADL1Q9UQQ1 740 aa12.16□□□□□ -0.46
SEC61A1-205ENST00000483956 ZNF148Q9UQR1 794 aa12.16□□□□□ -0.46
SEC61A1-205ENST00000483956 EMSYQ7Z589 1322 aa12.16□□□□□ -0.46
SEC61A1-205ENST00000483956 ADGRA3Q8IWK6 1321 aa12.16□□□□□ -0.46
SEC61A1-205ENST00000483956 FAM47DPA6NHR8 397 aa12.16□□□□□ -0.46
SEC61A1-205ENST00000483956 FSCN2O14926 492 aa12.16□□□□□ -0.46
SEC61A1-205ENST00000483956 ITIH2P19823 946 aa12.16□□□□□ -0.46
SEC61A1-205ENST00000483956 PRELPP51888 382 aa12.16□□□□□ -0.46
SEC61A1-205ENST00000483956 MED21Q13503 144 aa12.16□□□□□ -0.46
SEC61A1-205ENST00000483956 SPDYAQ5MJ70 313 aa12.16□□□□□ -0.46
SEC61A1-205ENST00000483956 APOBEC3HQ6NTF7 200 aaKnown RBP12.16□□□□□ -0.46
SEC61A1-205ENST00000483956 PRUNE1Q86TP1 453 aa12.16□□□□□ -0.46
SEC61A1-205ENST00000483956 RASSF3Q86WH2 238 aa12.16□□□□□ -0.46
SEC61A1-205ENST00000483956 C12orf56Q8IXR9 622 aa12.16□□□□□ -0.46
SEC61A1-205ENST00000483956 FAM71AQ8IYT1 594 aa12.16□□□□□ -0.46
SEC61A1-205ENST00000483956 ZNF564Q8TBZ8 553 aaPredicted RBP12.16□□□□□ -0.46
SEC61A1-205ENST00000483956 PSPC1Q8WXF1 523 aaKnown RBP12.16□□□□□ -0.46
SEC61A1-205ENST00000483956 TEKT1Q969V4 418 aa12.16□□□□□ -0.46
SEC61A1-205ENST00000483956 FAM161BQ96MY7 647 aa12.16□□□□□ -0.46
SEC61A1-205ENST00000483956 UTP6Q9NYH9 597 aaKnown RBP12.16□□□□□ -0.46
SEC61A1-205ENST00000483956 LGALS13Q9UHV8 139 aa12.16□□□□□ -0.46
SEC61A1-205ENST00000483956 GTF3C4Q9UKN8 822 aa12.16□□□□□ -0.46
SEC61A1-205ENST00000483956 PPM1HQ9ULR3 514 aa12.16□□□□□ -0.46
SEC61A1-205ENST00000483956 C2CD2LO14523 706 aa12.16□□□□□ -0.46
SEC61A1-205ENST00000483956 BIRC5O15392 142 aa12.16□□□□□ -0.46
SEC61A1-205ENST00000483956 SPOPO43791 374 aa12.16□□□□□ -0.46
SEC61A1-205ENST00000483956 ADCY3O60266 1144 aa12.16□□□□□ -0.46
SEC61A1-205ENST00000483956 ZWINTO95229 277 aa12.16□□□□□ -0.46
SEC61A1-205ENST00000483956 TTC4O95801 387 aa12.16□□□□□ -0.46
SEC61A1-205ENST00000483956 MAN1A1P33908 653 aa12.16□□□□□ -0.46
SEC61A1-205ENST00000483956 CHKAP35790 457 aa12.16□□□□□ -0.46
SEC61A1-205ENST00000483956 RXRGP48443 463 aa12.16□□□□□ -0.46
SEC61A1-205ENST00000483956 KYNUQ16719 465 aa12.16□□□□□ -0.46
SEC61A1-205ENST00000483956 FAM98CQ17RN3 349 aaKnown RBP12.16□□□□□ -0.46
SEC61A1-205ENST00000483956 OTOAQ7RTW8 1153 aa12.16□□□□□ -0.46
SEC61A1-205ENST00000483956 NUP93Q8N1F7 819 aa12.16□□□□□ -0.46
SEC61A1-205ENST00000483956 OR6Y1Q8NGX8 325 aa12.16□□□□□ -0.46
SEC61A1-205ENST00000483956 PLVAPQ9BX97 442 aa12.16□□□□□ -0.46
SEC61A1-205ENST00000483956 KIAA1522Q9P206 1035 aaPredicted RBP12.16□□□□□ -0.46
SEC61A1-205ENST00000483956 A0A1W2PRG0 241 aa12.15□□□□□ -0.46
SEC61A1-205ENST00000483956 F5H6K3 240 aa12.15□□□□□ -0.46
SEC61A1-205ENST00000483956 SPTLC1O15269 473 aa12.15□□□□□ -0.46
SEC61A1-205ENST00000483956 HAUS5O94927 633 aa12.15□□□□□ -0.46
SEC61A1-205ENST00000483956 GAS8O95995 478 aa12.15□□□□□ -0.46
SEC61A1-205ENST00000483956 LDHAP00338 332 aaKnown RBP12.15□□□□□ -0.46
SEC61A1-205ENST00000483956 SMIM18P0DKX4 95 aa12.15□□□□□ -0.46
SEC61A1-205ENST00000483956 HOXA13P31271 388 aaPredicted RBP12.15□□□□□ -0.46
SEC61A1-205ENST00000483956 PGM1P36871 562 aa12.15□□□□□ -0.46
SEC61A1-205ENST00000483956 CLCN2P51788 898 aa12.15□□□□□ -0.46
SEC61A1-205ENST00000483956 VAMP7P51809 220 aa12.15□□□□□ -0.46
SEC61A1-205ENST00000483956 MCCD1P59942 119 aaPredicted RBP12.15□□□□□ -0.46
SEC61A1-205ENST00000483956 PDE1BQ01064 536 aa12.15□□□□□ -0.46
SEC61A1-205ENST00000483956 CAV1Q03135 178 aa12.15□□□□□ -0.46
SEC61A1-205ENST00000483956 NFIAQ12857 509 aa12.15□□□□□ -0.46
SEC61A1-205ENST00000483956 ALCAMQ13740 583 aa12.15□□□□□ -0.46
SEC61A1-205ENST00000483956 PTK6Q13882 451 aa12.15□□□□□ -0.46
SEC61A1-205ENST00000483956 NOP9Q86U38 636 aaKnown RBP12.15□□□□□ -0.46
SEC61A1-205ENST00000483956 SNX27Q96L92 541 aa12.15□□□□□ -0.46
SEC61A1-205ENST00000483956 NUP85Q9BW27 656 aa12.15□□□□□ -0.46
SEC61A1-205ENST00000483956 CROTQ9UKG9 612 aa12.15□□□□□ -0.46
SEC61A1-205ENST00000483956 ZNF536O15090 1300 aa12.15□□□□□ -0.46
SEC61A1-205ENST00000483956 RASA4BC9J798 803 aa12.15□□□□□ -0.46
SEC61A1-205ENST00000483956 RASA4O43374 803 aa12.15□□□□□ -0.46
SEC61A1-205ENST00000483956 KCNJ1P48048 391 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms