RNA–Protein interactions for RNA: ENST00000483888.6

COL12A1-207, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL12A1, Length 9,637 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-207ENST00000483888 COPZ1P61923 177 aa10.67□□□□□ -0.7
COL12A1-207ENST00000483888 WDR36Q8NI36 951 aaKnown RBP10.67□□□□□ -0.7
COL12A1-207ENST00000483888 MTG1Q9BT17 334 aaPredicted RBP10.67□□□□□ -0.7
COL12A1-207ENST00000483888 TEKT3Q9BXF9 490 aa10.67□□□□□ -0.7
COL12A1-207ENST00000483888 TASP1Q9H6P5 420 aa10.67□□□□□ -0.7
COL12A1-207ENST00000483888 GJB4Q9NTQ9 266 aa10.67□□□□□ -0.7
COL12A1-207ENST00000483888 UBA2Q9UBT2 640 aaPredicted RBP10.67□□□□□ -0.7
COL12A1-207ENST00000483888 SLC9A2Q9UBY0 812 aa10.67□□□□□ -0.7
COL12A1-207ENST00000483888 PARNO95453 639 aaKnown RBP10.67□□□□□ -0.7
COL12A1-207ENST00000483888 WEE2P0C1S8 567 aa10.67□□□□□ -0.7
COL12A1-207ENST00000483888 SPIDRQ14159 915 aa10.67□□□□□ -0.7
COL12A1-207ENST00000483888 HEATR6Q6AI08 1181 aaKnown RBP10.67□□□□□ -0.7
COL12A1-207ENST00000483888 NMRK1Q9NWW6 199 aa10.67□□□□□ -0.7
COL12A1-207ENST00000483888 STON1Q9Y6Q2 735 aa10.67□□□□□ -0.7
COL12A1-207ENST00000483888 PRPF3O43395 683 aaKnown RBP10.67□□□□□ -0.7
COL12A1-207ENST00000483888 RALBP11234 206 aa10.67□□□□□ -0.7
COL12A1-207ENST00000483888 KCNK10P57789 538 aa10.67□□□□□ -0.7
COL12A1-207ENST00000483888 SULT1C3Q6IMI6 304 aa10.67□□□□□ -0.7
COL12A1-207ENST00000483888 SAR1AQ9NR31 198 aa10.67□□□□□ -0.7
COL12A1-207ENST00000483888 ADD3Q9UEY8 706 aaKnown RBP10.67□□□□□ -0.7
COL12A1-207ENST00000483888 FASP25445 335 aa10.67□□□□□ -0.7
COL12A1-207ENST00000483888 ACAP2Q15057 778 aa10.67□□□□□ -0.7
COL12A1-207ENST00000483888 NECTIN1Q15223 517 aa10.67□□□□□ -0.7
COL12A1-207ENST00000483888 QPRTQ15274 297 aa10.67□□□□□ -0.7
COL12A1-207ENST00000483888 SPDYAQ5MJ70 313 aa10.67□□□□□ -0.7
COL12A1-207ENST00000483888 HACE1Q8IYU2 909 aa10.67□□□□□ -0.7
COL12A1-207ENST00000483888 SCAIQ8N9R8 606 aa10.67□□□□□ -0.7
COL12A1-207ENST00000483888 THRAP3Q9Y2W1 955 aaKnown RBP10.67□□□□□ -0.7
COL12A1-207ENST00000483888 C1DQ13901 141 aaKnown RBP10.66□□□□□ -0.7
COL12A1-207ENST00000483888 KRT74Q7RTS7 529 aa10.66□□□□□ -0.7
COL12A1-207ENST00000483888 ZBTB8OSQ8IWT0 167 aa10.66□□□□□ -0.7
COL12A1-207ENST00000483888 TBCKQ8TEA7 893 aa10.66□□□□□ -0.7
COL12A1-207ENST00000483888 ACAT2Q9BWD1 397 aa10.66□□□□□ -0.7
COL12A1-207ENST00000483888 NUAK2Q9H093 628 aa10.66□□□□□ -0.7
COL12A1-207ENST00000483888 CROCCQ5TZA2 2017 aa10.66□□□□□ -0.7
COL12A1-207ENST00000483888 AREL1O15033 823 aa10.66□□□□□ -0.7
COL12A1-207ENST00000483888 FAPQ12884 760 aa10.66□□□□□ -0.7
COL12A1-207ENST00000483888 GPR107Q5VW38 600 aa10.66□□□□□ -0.7
COL12A1-207ENST00000483888 OR6B2Q6IFH4 312 aa10.66□□□□□ -0.7
COL12A1-207ENST00000483888 METTL16Q86W50 562 aaKnown RBP10.66□□□□□ -0.7
COL12A1-207ENST00000483888 NGRNQ9NPE2 291 aaKnown RBP10.66□□□□□ -0.7
COL12A1-207ENST00000483888 SH2B2O14492 632 aaPredicted RBP10.66□□□□□ -0.7
COL12A1-207ENST00000483888 RAB27AP51159 221 aa10.66□□□□□ -0.7
COL12A1-207ENST00000483888 EIF3EP60228 445 aaKnown RBP10.66□□□□□ -0.7
COL12A1-207ENST00000483888 CHRNB3Q05901 458 aa10.66□□□□□ -0.7
COL12A1-207ENST00000483888 PDPK2PQ6A1A2 396 aa10.66□□□□□ -0.7
COL12A1-207ENST00000483888 GALNT15Q8N3T1 639 aa10.66□□□□□ -0.7
COL12A1-207ENST00000483888 ROGDIQ9GZN7 287 aa10.66□□□□□ -0.7
COL12A1-207ENST00000483888 PCDH11YQ9BZA8 1340 aa10.66□□□□□ -0.7
COL12A1-207ENST00000483888 CCRL2O00421 344 aa10.66□□□□□ -0.7
COL12A1-207ENST00000483888 MAP2K7O14733 419 aa10.66□□□□□ -0.7
COL12A1-207ENST00000483888 FOXN1O15353 648 aa10.66□□□□□ -0.7
COL12A1-207ENST00000483888 KCNN4O15554 427 aa10.66□□□□□ -0.7
COL12A1-207ENST00000483888 LRRC74AQ0VAA2 488 aa10.66□□□□□ -0.7
COL12A1-207ENST00000483888 TRMT2AQ8IZ69 625 aaKnown RBP10.66□□□□□ -0.7
COL12A1-207ENST00000483888 TFDP2Q14188 446 aa10.66□□□□□ -0.7
COL12A1-207ENST00000483888 CCDC157Q569K6 752 aa10.66□□□□□ -0.7
COL12A1-207ENST00000483888 TBCELQ5QJ74 424 aa10.66□□□□□ -0.7
COL12A1-207ENST00000483888 SPICE1Q8N0Z3 855 aa10.66□□□□□ -0.7
COL12A1-207ENST00000483888 PI4K2BQ8TCG2 481 aa10.66□□□□□ -0.7
COL12A1-207ENST00000483888 HDAC2Q92769 488 aaKnown RBP10.66□□□□□ -0.7
COL12A1-207ENST00000483888 TRMT13Q9NUP7 481 aaKnown RBP10.66□□□□□ -0.7
COL12A1-207ENST00000483888 PCSK1NQ9UHG2 260 aa10.66□□□□□ -0.7
COL12A1-207ENST00000483888 KANSL1LA0AUZ9 987 aa10.66□□□□□ -0.7
COL12A1-207ENST00000483888 SSNA1O43805 119 aa10.66□□□□□ -0.7
COL12A1-207ENST00000483888 SRP54P61011 504 aaKnown RBP10.66□□□□□ -0.7
COL12A1-207ENST00000483888 NET1Q7Z628 596 aaPredicted RBP10.66□□□□□ -0.7
COL12A1-207ENST00000483888 ZBTB46Q86UZ6 589 aa10.66□□□□□ -0.7
COL12A1-207ENST00000483888 HES6Q96HZ4 224 aa10.66□□□□□ -0.7
COL12A1-207ENST00000483888 ADGBQ8N7X0 1667 aa10.66□□□□□ -0.7
COL12A1-207ENST00000483888 LOC100506127A0A0U1RQW1 187 aa10.66□□□□□ -0.7
COL12A1-207ENST00000483888 ITGA9Q13797 1035 aa10.66□□□□□ -0.7
COL12A1-207ENST00000483888 PROX1Q92786 737 aa10.66□□□□□ -0.7
COL12A1-207ENST00000483888 RNFT2Q96EX2 444 aa10.66□□□□□ -0.7
COL12A1-207ENST00000483888 POLG2Q9UHN1 485 aa10.66□□□□□ -0.7
COL12A1-207ENST00000483888 NIP7Q9Y221 180 aaKnown RBP eCLIP10.66□□□□□ -0.7
COL12A1-207ENST00000483888 TRPC5OSA6NMA1 111 aa10.65□□□□□ -0.7
COL12A1-207ENST00000483888 RTN2O75298 545 aa10.65□□□□□ -0.7
COL12A1-207ENST00000483888 SP100P23497 879 aaPredicted RBP10.65□□□□□ -0.7
COL12A1-207ENST00000483888 SNX17Q15036 470 aa10.65□□□□□ -0.7
COL12A1-207ENST00000483888 PDCD4Q53EL6 469 aaKnown RBP10.65□□□□□ -0.7
COL12A1-207ENST00000483888 COBLL1Q53SF7 1204 aa10.65□□□□□ -0.7
COL12A1-207ENST00000483888 CCSAPQ6IQ19 270 aaPredicted RBP10.65□□□□□ -0.7
COL12A1-207ENST00000483888 SHC4Q6S5L8 630 aa10.65□□□□□ -0.7
COL12A1-207ENST00000483888 TMED5Q9Y3A6 229 aa10.65□□□□□ -0.7
COL12A1-207ENST00000483888 E5RI56 91 aa10.65□□□□□ -0.7
COL12A1-207ENST00000483888 POLR2MP0CAP2 368 aa10.65□□□□□ -0.7
COL12A1-207ENST00000483888 NCCRP1Q6ZVX7 275 aaPredicted RBP10.65□□□□□ -0.7
COL12A1-207ENST00000483888 NFATC2IPQ8NCF5 419 aa10.65□□□□□ -0.7
COL12A1-207ENST00000483888 NLRP3Q96P20 1036 aa10.65□□□□□ -0.7
COL12A1-207ENST00000483888 SARS2Q9NP81 518 aaKnown RBP10.65□□□□□ -0.7
COL12A1-207ENST00000483888 KLHL11Q9NVR0 708 aa10.65□□□□□ -0.7
COL12A1-207ENST00000483888 UVRAGQ9P2Y5 699 aa10.65□□□□□ -0.7
COL12A1-207ENST00000483888 SYNPO2Q9UMS6 1093 aa10.65□□□□□ -0.7
COL12A1-207ENST00000483888 MAP3K13O43283 966 aa10.65□□□□□ -0.7
COL12A1-207ENST00000483888 ALDH1A3P47895 512 aa10.65□□□□□ -0.7
COL12A1-207ENST00000483888 HMBOX1Q6NT76 420 aa10.65□□□□□ -0.7
COL12A1-207ENST00000483888 GLYCTKQ8IVS8 523 aa10.65□□□□□ -0.7
COL12A1-207ENST00000483888 RNASE11Q8TAA1 199 aaKnown RBP10.65□□□□□ -0.7
COL12A1-207ENST00000483888 COPS7BQ9H9Q2 264 aaPredicted RBP10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms