RNA–Protein interactions for RNA: ENST00000483778.5

ATG4B-221, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 1,103 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-221ENST00000483778 SLC38A8A6NNN8 435 aa19.43■□□□□ 0.7
ATG4B-221ENST00000483778 MAN2B1O00754 1011 aa19.43■□□□□ 0.7
ATG4B-221ENST00000483778 NCAM2O15394 837 aa19.43■□□□□ 0.7
ATG4B-221ENST00000483778 IL18RAPO95256 599 aa19.43■□□□□ 0.7
ATG4B-221ENST00000483778 ITGB3P05106 788 aa19.43■□□□□ 0.7
ATG4B-221ENST00000483778 HAPLN1P10915 354 aaPredicted RBP19.43■□□□□ 0.7
ATG4B-221ENST00000483778 CHRNB1P11230 501 aa19.43■□□□□ 0.7
ATG4B-221ENST00000483778 PAX3P23760 479 aa19.43■□□□□ 0.7
ATG4B-221ENST00000483778 POLR2BP30876 1174 aaKnown RBP19.43■□□□□ 0.7
ATG4B-221ENST00000483778 MAGEA9P43362 315 aa19.43■□□□□ 0.7
ATG4B-221ENST00000483778 ID4P47928 161 aa19.43■□□□□ 0.7
ATG4B-221ENST00000483778 POU5F1Q01860 360 aaKnown RBP19.43■□□□□ 0.7
ATG4B-221ENST00000483778 FCHO2Q0JRZ9 810 aa19.43■□□□□ 0.7
ATG4B-221ENST00000483778 SDHAF4Q5VUM1 108 aa19.43■□□□□ 0.7
ATG4B-221ENST00000483778 TXNDC11Q6PKC3 985 aa19.43■□□□□ 0.7
ATG4B-221ENST00000483778 CCDC73Q6ZRK6 1079 aa19.43■□□□□ 0.7
ATG4B-221ENST00000483778 BRSK2Q8IWQ3 736 aa19.43■□□□□ 0.7
ATG4B-221ENST00000483778 FAM200AQ8TCP9 573 aa19.43■□□□□ 0.7
ATG4B-221ENST00000483778 RMDN1Q96DB5 314 aa19.43■□□□□ 0.7
ATG4B-221ENST00000483778 INTS4Q96HW7 963 aaKnown RBP19.43■□□□□ 0.7
ATG4B-221ENST00000483778 CHRDQ9H2X0 955 aa19.43■□□□□ 0.7
ATG4B-221ENST00000483778 PRMT8Q9NR22 394 aaPredicted RBP19.43■□□□□ 0.7
ATG4B-221ENST00000483778 OLFML3Q9NRN5 406 aa19.43■□□□□ 0.7
ATG4B-221ENST00000483778 ABI2Q9NYB9 513 aaPredicted RBP19.43■□□□□ 0.7
ATG4B-221ENST00000483778 GTSE1Q9NYZ3 720 aa19.43■□□□□ 0.7
ATG4B-221ENST00000483778 HSFX1Q9UBD0 423 aa19.43■□□□□ 0.7
ATG4B-221ENST00000483778 SIX4Q9UIU6 781 aa19.43■□□□□ 0.7
ATG4B-221ENST00000483778 DSEQ9UL01 958 aa19.43■□□□□ 0.7
ATG4B-221ENST00000483778 L1RE1Q9UN81 338 aa19.43■□□□□ 0.7
ATG4B-221ENST00000483778 SDK1Q7Z5N4 2213 aa19.42■□□□□ 0.7
ATG4B-221ENST00000483778 CHADO15335 359 aa19.42■□□□□ 0.7
ATG4B-221ENST00000483778 STX6O43752 255 aa19.42■□□□□ 0.7
ATG4B-221ENST00000483778 KINO60870 393 aaKnown RBP19.42■□□□□ 0.7
ATG4B-221ENST00000483778 LILRB5O75023 590 aa19.42■□□□□ 0.7
ATG4B-221ENST00000483778 HMGA1P17096 107 aaKnown RBP19.42■□□□□ 0.7
ATG4B-221ENST00000483778 ACAT1P24752 427 aaKnown RBP19.42■□□□□ 0.7
ATG4B-221ENST00000483778 NASPP49321 788 aaPredicted RBP19.42■□□□□ 0.7
ATG4B-221ENST00000483778 TUFMP49411 452 aaKnown RBP19.42■□□□□ 0.7
ATG4B-221ENST00000483778 TNK2Q07912 1038 aa19.42■□□□□ 0.7
ATG4B-221ENST00000483778 FOXD4L5Q5VV16 416 aaPredicted RBP19.42■□□□□ 0.7
ATG4B-221ENST00000483778 LMBRD2Q68DH5 695 aaPredicted RBP19.42■□□□□ 0.7
ATG4B-221ENST00000483778 OSTM1Q86WC4 334 aa19.42■□□□□ 0.7
ATG4B-221ENST00000483778 SYCP3Q8IZU3 236 aa19.42■□□□□ 0.7
ATG4B-221ENST00000483778 THEM5Q8N1Q8 247 aa19.42■□□□□ 0.7
ATG4B-221ENST00000483778 PDCL2Q8N4E4 241 aa19.42■□□□□ 0.7
ATG4B-221ENST00000483778 LINC00301Q8NCQ3 95 aa19.42■□□□□ 0.7
ATG4B-221ENST00000483778 NOC3LQ8WTT2 800 aaKnown RBP19.42■□□□□ 0.7
ATG4B-221ENST00000483778 FOXD4L4Q8WXT5 416 aaPredicted RBP19.42■□□□□ 0.7
ATG4B-221ENST00000483778 RUBCNQ92622 972 aa19.42■□□□□ 0.7
ATG4B-221ENST00000483778 C2orf42Q9NWW7 574 aa19.42■□□□□ 0.7
ATG4B-221ENST00000483778 ZSCAN32Q9NX65 697 aa19.42■□□□□ 0.7
ATG4B-221ENST00000483778 PCDHB13Q9Y5F0 798 aa19.42■□□□□ 0.7
ATG4B-221ENST00000483778 MORC2Q9Y6X9 1032 aaPredicted RBP19.42■□□□□ 0.7
ATG4B-221ENST00000483778 PTPRJQ12913 1337 aa19.42■□□□□ 0.7
ATG4B-221ENST00000483778 CACNA1AO00555 2505 aa19.41■□□□□ 0.7
ATG4B-221ENST00000483778 GARTP22102 1010 aa19.41■□□□□ 0.7
ATG4B-221ENST00000483778 TXLNAP40222 546 aa19.41■□□□□ 0.7
ATG4B-221ENST00000483778 SV2CQ496J9 727 aa19.41■□□□□ 0.7
ATG4B-221ENST00000483778 ITIH5Q86UX2 942 aa19.41■□□□□ 0.7
ATG4B-221ENST00000483778 YAF2Q8IY57 180 aa19.41■□□□□ 0.7
ATG4B-221ENST00000483778 CSGALNACT2Q8N6G5 542 aa19.41■□□□□ 0.7
ATG4B-221ENST00000483778 ATRIPQ8WXE1 791 aa19.41■□□□□ 0.7
ATG4B-221ENST00000483778 HINFPQ9BQA5 517 aa19.41■□□□□ 0.7
ATG4B-221ENST00000483778 PI4K2AQ9BTU6 479 aa19.41■□□□□ 0.7
ATG4B-221ENST00000483778 TASP1Q9H6P5 420 aa19.41■□□□□ 0.7
ATG4B-221ENST00000483778 RBAKQ9NYW8 714 aaPredicted RBP19.41■□□□□ 0.7
ATG4B-221ENST00000483778 EXOC7Q9UPT5 735 aa19.41■□□□□ 0.7
ATG4B-221ENST00000483778 PCDHGA2Q9Y5H1 932 aa19.41■□□□□ 0.7
ATG4B-221ENST00000483778 EXTL3O43909 919 aa19.4■□□□□ 0.7
ATG4B-221ENST00000483778 F11P03951 625 aa19.4■□□□□ 0.7
ATG4B-221ENST00000483778 KPNA1P52294 538 aaPredicted RBP19.4■□□□□ 0.7
ATG4B-221ENST00000483778 SATB1Q01826 763 aa19.4■□□□□ 0.7
ATG4B-221ENST00000483778 DMWDQ09019 674 aa19.4■□□□□ 0.7
ATG4B-221ENST00000483778 BFSP1Q12934 665 aa19.4■□□□□ 0.7
ATG4B-221ENST00000483778 E2F4Q16254 413 aa19.4■□□□□ 0.7
ATG4B-221ENST00000483778 NT5DC4Q86YG4 428 aa19.4■□□□□ 0.7
ATG4B-221ENST00000483778 OR5B17Q8NGF7 314 aa19.4■□□□□ 0.7
ATG4B-221ENST00000483778 RIN3Q8TB24 985 aa19.4■□□□□ 0.7
ATG4B-221ENST00000483778 CSGALNACT1Q8TDX6 532 aa19.4■□□□□ 0.7
ATG4B-221ENST00000483778 E2F7Q96AV8 911 aa19.4■□□□□ 0.7
ATG4B-221ENST00000483778 PKMYT1Q99640 499 aa19.4■□□□□ 0.7
ATG4B-221ENST00000483778 CCL26Q9Y258 94 aa19.4■□□□□ 0.7
ATG4B-221ENST00000483778 PTPRDP23468 1912 aa19.39■□□□□ 0.7
ATG4B-221ENST00000483778 K7ELQ4 463 aaPredicted RBP19.39■□□□□ 0.69
ATG4B-221ENST00000483778 CYP2F1P24903 491 aa19.39■□□□□ 0.69
ATG4B-221ENST00000483778 NLRP12P59046 1061 aa19.39■□□□□ 0.69
ATG4B-221ENST00000483778 STK38Q15208 465 aa19.39■□□□□ 0.69
ATG4B-221ENST00000483778 DDR2Q16832 855 aa19.39■□□□□ 0.69
ATG4B-221ENST00000483778 MAMSTRQ6ZN01 415 aa19.39■□□□□ 0.69
ATG4B-221ENST00000483778 Q6ZS52 159 aa19.39■□□□□ 0.69
ATG4B-221ENST00000483778 SPPL2BQ8TCT7 592 aa19.39■□□□□ 0.69
ATG4B-221ENST00000483778 MTMR12Q9C0I1 747 aa19.39■□□□□ 0.69
ATG4B-221ENST00000483778 ZSCAN16Q9H4T2 348 aaPredicted RBP19.39■□□□□ 0.69
ATG4B-221ENST00000483778 GTF3C4Q9UKN8 822 aa19.39■□□□□ 0.69
ATG4B-221ENST00000483778 PCDHB5Q9Y5E4 795 aa19.39■□□□□ 0.69
ATG4B-221ENST00000483778 MYBPHLA2RUH7 354 aa19.38■□□□□ 0.69
ATG4B-221ENST00000483778 OTOL1A6NHN0 477 aaPredicted RBP19.38■□□□□ 0.69
ATG4B-221ENST00000483778 SPECC1L-ADORA2AF8WAN1 911 aa19.38■□□□□ 0.69
ATG4B-221ENST00000483778 DPYSL4O14531 572 aa19.38■□□□□ 0.69
ATG4B-221ENST00000483778 SPTLC2O15270 562 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms