RNA–Protein interactions for RNA: ENST00000483544.1

LINC00477-201, long intergenic non-protein coding RNA 477, humanhuman

TSL 2 BASIC

Gene LINC00477, Length 1,710 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00477-201ENST00000483544 BRCA1P38398 1863 aaKnown RBP13.17□□□□□ -0.3
LINC00477-201ENST00000483544 SPDYE5A6NIY4 337 aa13.16□□□□□ -0.3
LINC00477-201ENST00000483544 ZNF862O60290 1169 aa13.16□□□□□ -0.3
LINC00477-201ENST00000483544 ATG7O95352 703 aa13.16□□□□□ -0.3
LINC00477-201ENST00000483544 GAS8O95995 478 aa13.16□□□□□ -0.3
LINC00477-201ENST00000483544 CYP1A1P04798 512 aaPredicted RBP13.16□□□□□ -0.3
LINC00477-201ENST00000483544 CLTAP09496 248 aa13.16□□□□□ -0.3
LINC00477-201ENST00000483544 SUPT20HL2P0C7V6 817 aa13.16□□□□□ -0.3
LINC00477-201ENST00000483544 KRT5P13647 590 aa13.16□□□□□ -0.3
LINC00477-201ENST00000483544 ATP2A2P16615 1042 aaKnown RBP13.16□□□□□ -0.3
LINC00477-201ENST00000483544 ATP6V1C1P21283 382 aa13.16□□□□□ -0.3
LINC00477-201ENST00000483544 SP100P23497 879 aaPredicted RBP13.16□□□□□ -0.3
LINC00477-201ENST00000483544 MLH1P40692 756 aa13.16□□□□□ -0.3
LINC00477-201ENST00000483544 ARPC4P59998 168 aa13.16□□□□□ -0.3
LINC00477-201ENST00000483544 PRKCEQ02156 737 aa13.16□□□□□ -0.3
LINC00477-201ENST00000483544 NSUN2Q08J23 767 aaKnown RBP eCLIP13.16□□□□□ -0.3
LINC00477-201ENST00000483544 GRM1Q13255 1194 aa13.16□□□□□ -0.3
LINC00477-201ENST00000483544 PTK6Q13882 451 aa13.16□□□□□ -0.3
LINC00477-201ENST00000483544 SUPT20HL1Q3ZLR7 823 aa13.16□□□□□ -0.3
LINC00477-201ENST00000483544 TNFAIP8L3Q5GJ75 292 aa13.16□□□□□ -0.3
LINC00477-201ENST00000483544 ERMARDQ5T6L9 678 aa13.16□□□□□ -0.3
LINC00477-201ENST00000483544 TTC27Q6P3X3 843 aa13.16□□□□□ -0.3
LINC00477-201ENST00000483544 ZSWIM2Q8NEG5 633 aa13.16□□□□□ -0.3
LINC00477-201ENST00000483544 BSNDQ8WZ55 320 aa13.16□□□□□ -0.3
LINC00477-201ENST00000483544 ATG4CQ96DT6 458 aa13.16□□□□□ -0.3
LINC00477-201ENST00000483544 DDX27Q96GQ7 796 aaKnown RBP13.16□□□□□ -0.3
LINC00477-201ENST00000483544 MIS12Q9H081 205 aa13.16□□□□□ -0.3
LINC00477-201ENST00000483544 TMEM134Q9H6X4 195 aa13.16□□□□□ -0.3
LINC00477-201ENST00000483544 CNTN6Q9UQ52 1028 aa13.16□□□□□ -0.3
LINC00477-201ENST00000483544 SSC5DA1L4H1 1573 aa13.16□□□□□ -0.3
LINC00477-201ENST00000483544 RIPK2O43353 540 aa13.16□□□□□ -0.3
LINC00477-201ENST00000483544 C4BPAP04003 597 aaKnown RBP13.16□□□□□ -0.3
LINC00477-201ENST00000483544 ACADSP16219 412 aa13.16□□□□□ -0.3
LINC00477-201ENST00000483544 RFC5P40937 340 aa13.16□□□□□ -0.3
LINC00477-201ENST00000483544 NSFP46459 744 aaKnown RBP13.16□□□□□ -0.3
LINC00477-201ENST00000483544 ACTR2P61160 394 aa13.16□□□□□ -0.3
LINC00477-201ENST00000483544 KLC1Q07866 573 aa13.16□□□□□ -0.3
LINC00477-201ENST00000483544 PPP1R7Q15435 360 aa13.16□□□□□ -0.3
LINC00477-201ENST00000483544 SGO2Q562F6 1265 aa13.16□□□□□ -0.3
LINC00477-201ENST00000483544 GKAP1Q5VSY0 366 aaPredicted RBP13.16□□□□□ -0.3
LINC00477-201ENST00000483544 SNRNP48Q6IEG0 339 aaKnown RBP13.16□□□□□ -0.3
LINC00477-201ENST00000483544 SWSAP1Q6NVH7 229 aa13.16□□□□□ -0.3
LINC00477-201ENST00000483544 IRGCQ6NXR0 463 aa13.16□□□□□ -0.3
LINC00477-201ENST00000483544 ADAT2Q7Z6V5 191 aaKnown RBP13.16□□□□□ -0.3
LINC00477-201ENST00000483544 APOBEC3FQ8IUX4 373 aaKnown RBP13.16□□□□□ -0.3
LINC00477-201ENST00000483544 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.16□□□□□ -0.3
LINC00477-201ENST00000483544 RAPGEF5Q92565 580 aa13.16□□□□□ -0.3
LINC00477-201ENST00000483544 RNF25Q96BH1 459 aaPredicted RBP13.16□□□□□ -0.3
LINC00477-201ENST00000483544 SNF8Q96H20 258 aa13.16□□□□□ -0.3
LINC00477-201ENST00000483544 SNX27Q96L92 541 aa13.16□□□□□ -0.3
LINC00477-201ENST00000483544 SERPINB12Q96P63 405 aa13.16□□□□□ -0.3
LINC00477-201ENST00000483544 XPO6Q96QU8 1125 aaKnown RBP13.16□□□□□ -0.3
LINC00477-201ENST00000483544 CGREF1Q99674 301 aa13.16□□□□□ -0.3
LINC00477-201ENST00000483544 TEX13BQ9BXU2 312 aa13.16□□□□□ -0.3
LINC00477-201ENST00000483544 EIF2AQ9BY44 585 aaKnown RBP13.16□□□□□ -0.3
LINC00477-201ENST00000483544 ZCWPW1Q9H0M4 648 aa13.16□□□□□ -0.3
LINC00477-201ENST00000483544 POLR3FQ9H1D9 316 aaPredicted RBP13.16□□□□□ -0.3
LINC00477-201ENST00000483544 PPANQ9NQ55 473 aaKnown RBP13.16□□□□□ -0.3
LINC00477-201ENST00000483544 XPNPEP1Q9NQW7 623 aa13.16□□□□□ -0.3
LINC00477-201ENST00000483544 TBCCD1Q9NVR7 557 aa13.16□□□□□ -0.3
LINC00477-201ENST00000483544 HOXC10Q9NYD6 342 aa13.16□□□□□ -0.3
LINC00477-201ENST00000483544 SEPT9Q9UHD8 586 aaPredicted RBP13.16□□□□□ -0.3
LINC00477-201ENST00000483544 ANAPC7Q9UJX3 599 aa13.16□□□□□ -0.3
LINC00477-201ENST00000483544 LTBP3Q9NS15 1303 aa13.15□□□□□ -0.3
LINC00477-201ENST00000483544 ASAP2O43150 1006 aa13.15□□□□□ -0.3
LINC00477-201ENST00000483544 THAP12O43422 761 aa13.15□□□□□ -0.3
LINC00477-201ENST00000483544 KDM1AO60341 852 aa13.15□□□□□ -0.3
LINC00477-201ENST00000483544 TCEA3O75764 348 aa13.15□□□□□ -0.3
LINC00477-201ENST00000483544 PROSCO94903 275 aa13.15□□□□□ -0.3
LINC00477-201ENST00000483544 HLA-DRAP01903 254 aa13.15□□□□□ -0.3
LINC00477-201ENST00000483544 HOXD10P28358 340 aa13.15□□□□□ -0.3
LINC00477-201ENST00000483544 TCF7P36402 384 aaPredicted RBP13.15□□□□□ -0.3
LINC00477-201ENST00000483544 MARCKSL1P49006 195 aa13.15□□□□□ -0.3
LINC00477-201ENST00000483544 POLE2P56282 527 aa13.15□□□□□ -0.3
LINC00477-201ENST00000483544 C1QBPQ07021 282 aaKnown RBP13.15□□□□□ -0.3
LINC00477-201ENST00000483544 MAP7Q14244 749 aa13.15□□□□□ -0.3
LINC00477-201ENST00000483544 RCN1Q15293 331 aa13.15□□□□□ -0.3
LINC00477-201ENST00000483544 ZNF568Q3ZCX4 644 aa13.15□□□□□ -0.3
LINC00477-201ENST00000483544 CFAP157Q5JU67 520 aa13.15□□□□□ -0.3
LINC00477-201ENST00000483544 OR52E8Q6IFG1 317 aa13.15□□□□□ -0.3
LINC00477-201ENST00000483544 PHF13Q86YI8 300 aaPredicted RBP13.15□□□□□ -0.3
LINC00477-201ENST00000483544 CHST13Q8NET6 341 aa13.15□□□□□ -0.3
LINC00477-201ENST00000483544 PTPRN2Q92932 1015 aa13.15□□□□□ -0.3
LINC00477-201ENST00000483544 CHMP6Q96FZ7 201 aa13.15□□□□□ -0.3
LINC00477-201ENST00000483544 SEC16BQ96JE7 1060 aa13.15□□□□□ -0.3
LINC00477-201ENST00000483544 HAPLN3Q96S86 360 aa13.15□□□□□ -0.3
LINC00477-201ENST00000483544 FAM213AQ9BRX8 229 aa13.15□□□□□ -0.3
LINC00477-201ENST00000483544 NIFKQ9BYG3 293 aaKnown RBP13.15□□□□□ -0.3
LINC00477-201ENST00000483544 NSRP1Q9H0G5 558 aaKnown RBP13.15□□□□□ -0.3
LINC00477-201ENST00000483544 PORCNQ9H237 461 aa13.15□□□□□ -0.3
LINC00477-201ENST00000483544 CYP39A1Q9NYL5 469 aa13.15□□□□□ -0.3
LINC00477-201ENST00000483544 AGO2Q9UKV8 859 aaKnown RBP13.15□□□□□ -0.3
LINC00477-201ENST00000483544 ZNF214Q9UL59 606 aaPredicted RBP13.15□□□□□ -0.3
LINC00477-201ENST00000483544 N6AMT1Q9Y5N5 214 aa13.15□□□□□ -0.3
LINC00477-201ENST00000483544 PPP2R3BQ9Y5P8 575 aa13.15□□□□□ -0.3
LINC00477-201ENST00000483544 COMMD3-BMI1R4GMX3 469 aa13.15□□□□□ -0.3
LINC00477-201ENST00000483544 DOCK5Q9H7D0 1870 aa13.15□□□□□ -0.3
LINC00477-201ENST00000483544 TMEM150BA6NC51 233 aa13.14□□□□□ -0.31
LINC00477-201ENST00000483544 RASGRF2O14827 1237 aa13.14□□□□□ -0.31
LINC00477-201ENST00000483544 DLATP10515 647 aaKnown RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms