RNA–Protein interactions for RNA: ENST00000483122.1

VTI1A-205, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 4

Gene VTI1A, Length 2,423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-205ENST00000483122 SLFN12Q8IYM2 578 aa12.42□□□□□ -0.42
VTI1A-205ENST00000483122 CLMNQ96JQ2 1002 aa12.42□□□□□ -0.42
VTI1A-205ENST00000483122 DDX18Q9NVP1 670 aaKnown RBP12.42□□□□□ -0.42
VTI1A-205ENST00000483122 ZDHHC7Q9NXF8 308 aa12.42□□□□□ -0.42
VTI1A-205ENST00000483122 PTTG2Q9NZH5 202 aa12.42□□□□□ -0.42
VTI1A-205ENST00000483122 MYH11P35749 1972 aa12.42□□□□□ -0.42
VTI1A-205ENST00000483122 DNALI1O14645 258 aaPredicted RBP12.42□□□□□ -0.42
VTI1A-205ENST00000483122 BGNP21810 368 aa12.42□□□□□ -0.42
VTI1A-205ENST00000483122 NOVP48745 357 aa12.42□□□□□ -0.42
VTI1A-205ENST00000483122 GEMIN4P57678 1058 aaKnown RBP12.42□□□□□ -0.42
VTI1A-205ENST00000483122 KDSRQ06136 332 aa12.42□□□□□ -0.42
VTI1A-205ENST00000483122 RASA3Q14644 834 aa12.42□□□□□ -0.42
VTI1A-205ENST00000483122 CCNG2Q16589 344 aa12.42□□□□□ -0.42
VTI1A-205ENST00000483122 CCDC142Q17RM4 750 aa12.42□□□□□ -0.42
VTI1A-205ENST00000483122 TMCO4Q5TGY1 634 aa12.42□□□□□ -0.42
VTI1A-205ENST00000483122 ISLR2Q6UXK2 745 aa12.42□□□□□ -0.42
VTI1A-205ENST00000483122 SLC30A10Q6XR72 485 aa12.42□□□□□ -0.42
VTI1A-205ENST00000483122 PYDC1Q8WXC3 89 aa12.42□□□□□ -0.42
VTI1A-205ENST00000483122 LZICQ8WZA0 190 aa12.42□□□□□ -0.42
VTI1A-205ENST00000483122 KREMEN1Q96MU8 473 aa12.42□□□□□ -0.42
VTI1A-205ENST00000483122 MBOAT7Q96N66 472 aa12.42□□□□□ -0.42
VTI1A-205ENST00000483122 FIZ1Q96SL8 496 aa12.42□□□□□ -0.42
VTI1A-205ENST00000483122 P2RX7Q99572 595 aaKnown RBP12.42□□□□□ -0.42
VTI1A-205ENST00000483122 VPS11Q9H270 941 aa12.42□□□□□ -0.42
VTI1A-205ENST00000483122 DNAJB4Q9UDY4 337 aa12.42□□□□□ -0.42
VTI1A-205ENST00000483122 SLC24A2Q9UI40 661 aa12.42□□□□□ -0.42
VTI1A-205ENST00000483122 CYP3A7-CYP3A51PA0A087WV96 503 aa12.41□□□□□ -0.42
VTI1A-205ENST00000483122 SMIM18P0DKX4 95 aa12.41□□□□□ -0.42
VTI1A-205ENST00000483122 GAP43P17677 238 aa12.41□□□□□ -0.42
VTI1A-205ENST00000483122 CYP3A7P24462 503 aa12.41□□□□□ -0.42
VTI1A-205ENST00000483122 RGS2P41220 211 aa12.41□□□□□ -0.42
VTI1A-205ENST00000483122 GALK1P51570 392 aa12.41□□□□□ -0.42
VTI1A-205ENST00000483122 GPX6P59796 221 aa12.41□□□□□ -0.42
VTI1A-205ENST00000483122 ASPHQ12797 758 aa12.41□□□□□ -0.42
VTI1A-205ENST00000483122 PRKD1Q15139 912 aaPredicted RBP12.41□□□□□ -0.42
VTI1A-205ENST00000483122 TMEM259Q4ZIN3 620 aa12.41□□□□□ -0.42
VTI1A-205ENST00000483122 FAM71AQ8IYT1 594 aa12.41□□□□□ -0.42
VTI1A-205ENST00000483122 LARGE2Q8N3Y3 721 aa12.41□□□□□ -0.42
VTI1A-205ENST00000483122 BANPQ8N9N5 519 aa12.41□□□□□ -0.42
VTI1A-205ENST00000483122 FAM172AQ8WUF8 416 aa12.41□□□□□ -0.42
VTI1A-205ENST00000483122 HAUS1Q96CS2 278 aa12.41□□□□□ -0.42
VTI1A-205ENST00000483122 DGCR14Q96DF8 476 aaKnown RBP12.41□□□□□ -0.42
VTI1A-205ENST00000483122 MTBPQ96DY7 904 aa12.41□□□□□ -0.42
VTI1A-205ENST00000483122 FOXP3Q9BZS1 431 aa12.41□□□□□ -0.42
VTI1A-205ENST00000483122 PCIF1Q9H4Z3 704 aa12.41□□□□□ -0.42
VTI1A-205ENST00000483122 GPAMQ9HCL2 828 aa12.41□□□□□ -0.42
VTI1A-205ENST00000483122 SSU72Q9NP77 194 aaKnown RBP12.41□□□□□ -0.42
VTI1A-205ENST00000483122 SRP68Q9UHB9 627 aaKnown RBP12.41□□□□□ -0.42
VTI1A-205ENST00000483122 CDK5RAP2Q96SN8 1893 aa12.41□□□□□ -0.42
VTI1A-205ENST00000483122 DCAF8L1A6NGE4 600 aa12.41□□□□□ -0.42
VTI1A-205ENST00000483122 CAPN14A8MX76 684 aa12.41□□□□□ -0.42
VTI1A-205ENST00000483122 TISP43B9A030 160 aa12.41□□□□□ -0.42
VTI1A-205ENST00000483122 SNHG28P0DPA3 235 aa12.41□□□□□ -0.42
VTI1A-205ENST00000483122 VCLP18206 1134 aa12.41□□□□□ -0.42
VTI1A-205ENST00000483122 GJC1P36383 396 aa12.41□□□□□ -0.42
VTI1A-205ENST00000483122 ADARP55265 1226 aaKnown RBP12.41□□□□□ -0.42
VTI1A-205ENST00000483122 PPP4CP60510 307 aa12.41□□□□□ -0.42
VTI1A-205ENST00000483122 PLOD1Q02809 727 aaPredicted RBP12.41□□□□□ -0.42
VTI1A-205ENST00000483122 ZNF543Q08ER8 600 aa12.41□□□□□ -0.42
VTI1A-205ENST00000483122 TBL3Q12788 808 aaKnown RBP12.41□□□□□ -0.42
VTI1A-205ENST00000483122 TMED1Q13445 227 aa12.41□□□□□ -0.42
VTI1A-205ENST00000483122 MTMR2Q13614 643 aa12.41□□□□□ -0.42
VTI1A-205ENST00000483122 NCOA4Q13772 614 aa12.41□□□□□ -0.42
VTI1A-205ENST00000483122 PDK3Q15120 406 aa12.41□□□□□ -0.42
VTI1A-205ENST00000483122 SF3B3Q15393 1217 aaKnown RBP12.41□□□□□ -0.42
VTI1A-205ENST00000483122 HSF5Q4G112 596 aaPredicted RBP12.41□□□□□ -0.42
VTI1A-205ENST00000483122 EPC2Q52LR7 807 aa12.41□□□□□ -0.42
VTI1A-205ENST00000483122 EFHC2Q5JST6 749 aa12.41□□□□□ -0.42
VTI1A-205ENST00000483122 KLC3Q6P597 504 aa12.41□□□□□ -0.42
VTI1A-205ENST00000483122 FBXL19Q6PCT2 694 aa12.41□□□□□ -0.42
VTI1A-205ENST00000483122 ZNF720Q7Z2F6 126 aa12.41□□□□□ -0.42
VTI1A-205ENST00000483122 ANKRD23Q86SG2 305 aa12.41□□□□□ -0.42
VTI1A-205ENST00000483122 SLC51AQ86UW1 340 aa12.41□□□□□ -0.42
VTI1A-205ENST00000483122 GSTCDQ8NEC7 633 aa12.41□□□□□ -0.42
VTI1A-205ENST00000483122 MZB1Q8WU39 189 aa12.41□□□□□ -0.42
VTI1A-205ENST00000483122 TTC17Q96AE7 1141 aa12.41□□□□□ -0.42
VTI1A-205ENST00000483122 ELMO3Q96BJ8 720 aa12.41□□□□□ -0.42
VTI1A-205ENST00000483122 EPB41L1Q9H4G0 881 aa12.41□□□□□ -0.42
VTI1A-205ENST00000483122 USP29Q9HBJ7 922 aa12.41□□□□□ -0.42
VTI1A-205ENST00000483122 S100A14Q9HCY8 104 aa12.41□□□□□ -0.42
VTI1A-205ENST00000483122 MTMR4Q9NYA4 1195 aa12.41□□□□□ -0.42
VTI1A-205ENST00000483122 ADAMTS6Q9UKP5 1117 aa12.41□□□□□ -0.42
VTI1A-205ENST00000483122 COL24A1Q17RW2 1714 aa12.4□□□□□ -0.42
VTI1A-205ENST00000483122 SPDYE16A6NNV3 312 aaPredicted RBP12.4□□□□□ -0.42
VTI1A-205ENST00000483122 GOLGA8SH3BPF8 625 aa12.4□□□□□ -0.42
VTI1A-205ENST00000483122 GOLGA8MH3BSY2 632 aa12.4□□□□□ -0.42
VTI1A-205ENST00000483122 TXNDC9O14530 226 aa12.4□□□□□ -0.42
VTI1A-205ENST00000483122 HNRNPCP07910 306 aaKnown RBP eCLIP12.4□□□□□ -0.42
VTI1A-205ENST00000483122 CDK4P11802 303 aa12.4□□□□□ -0.42
VTI1A-205ENST00000483122 SLC1A1P43005 524 aa12.4□□□□□ -0.42
VTI1A-205ENST00000483122 ITGA9Q13797 1035 aa12.4□□□□□ -0.42
VTI1A-205ENST00000483122 TFDP1Q14186 410 aa12.4□□□□□ -0.42
VTI1A-205ENST00000483122 C2CD6Q53TS8 623 aa12.4□□□□□ -0.42
VTI1A-205ENST00000483122 FAM91A1Q658Y4 838 aa12.4□□□□□ -0.42
VTI1A-205ENST00000483122 KLHDC10Q6PID8 442 aa12.4□□□□□ -0.42
VTI1A-205ENST00000483122 UGT2A3Q6UWM9 527 aa12.4□□□□□ -0.42
VTI1A-205ENST00000483122 B3GNT6Q6ZMB0 384 aa12.4□□□□□ -0.42
VTI1A-205ENST00000483122 KCTD1Q719H9 257 aa12.4□□□□□ -0.42
VTI1A-205ENST00000483122 DHDDSQ86SQ9 333 aa12.4□□□□□ -0.42
VTI1A-205ENST00000483122 ZSWIM2Q8NEG5 633 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms