RNA–Protein interactions for RNA: ENST00000483117.1

LAPTM4A-202, Transcript of lysosomal protein transmembrane 4 alpha, humanhuman

TSL 2

Gene LAPTM4A, Length 487 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4A-202ENST00000483117 KRT85P78386 507 aa4.08□□□□□ -1.76
LAPTM4A-202ENST00000483117 EIF2B5Q13144 721 aaKnown RBP4.08□□□□□ -1.76
LAPTM4A-202ENST00000483117 GRM1Q13255 1194 aa4.08□□□□□ -1.76
LAPTM4A-202ENST00000483117 BMPR2Q13873 1038 aa4.08□□□□□ -1.76
LAPTM4A-202ENST00000483117 LLGL1Q15334 1064 aa4.08□□□□□ -1.76
LAPTM4A-202ENST00000483117 TBCCQ15814 346 aa4.08□□□□□ -1.76
LAPTM4A-202ENST00000483117 PTPN21Q16825 1174 aa4.08□□□□□ -1.76
LAPTM4A-202ENST00000483117 VPS53Q5VIR6 699 aa4.08□□□□□ -1.76
LAPTM4A-202ENST00000483117 KIAA1614Q5VZ46 1190 aa4.08□□□□□ -1.76
LAPTM4A-202ENST00000483117 ZNF425Q6IV72 752 aa4.08□□□□□ -1.76
LAPTM4A-202ENST00000483117 SEMA6DQ8NFY4 1073 aa4.08□□□□□ -1.76
LAPTM4A-202ENST00000483117 CNPPD1Q9BV87 410 aa4.08□□□□□ -1.76
LAPTM4A-202ENST00000483117 GPR35Q9HC97 309 aa4.08□□□□□ -1.76
LAPTM4A-202ENST00000483117 SERHLQ9NQF3 203 aa4.08□□□□□ -1.76
LAPTM4A-202ENST00000483117 GNL3LQ9NVN8 582 aaKnown RBP4.08□□□□□ -1.76
LAPTM4A-202ENST00000483117 RLIMQ9NVW2 624 aa4.08□□□□□ -1.76
LAPTM4A-202ENST00000483117 FLRT1Q9NZU1 646 aa4.08□□□□□ -1.76
LAPTM4A-202ENST00000483117 TARM1B6A8C7 271 aa4.07□□□□□ -1.76
LAPTM4A-202ENST00000483117 ZRANB2O95218 330 aaKnown RBP eCLIP4.07□□□□□ -1.76
LAPTM4A-202ENST00000483117 CHEK2O96017 543 aa4.07□□□□□ -1.76
LAPTM4A-202ENST00000483117 RARBP10826 455 aa4.07□□□□□ -1.76
LAPTM4A-202ENST00000483117 JUPP14923 745 aa4.07□□□□□ -1.76
LAPTM4A-202ENST00000483117 ITGALP20701 1170 aa4.07□□□□□ -1.76
LAPTM4A-202ENST00000483117 CD6P30203 668 aa4.07□□□□□ -1.76
LAPTM4A-202ENST00000483117 PIK3CGP48736 1102 aa4.07□□□□□ -1.76
LAPTM4A-202ENST00000483117 FXR1P51114 621 aaKnown RBP eCLIP4.07□□□□□ -1.76
LAPTM4A-202ENST00000483117 SLC10A2Q12908 348 aaPredicted RBP4.07□□□□□ -1.76
LAPTM4A-202ENST00000483117 BOP1Q14137 746 aaKnown RBP4.07□□□□□ -1.76
LAPTM4A-202ENST00000483117 KIF22Q14807 665 aa4.07□□□□□ -1.76
LAPTM4A-202ENST00000483117 MTX3Q5HYI7 312 aa4.07□□□□□ -1.76
LAPTM4A-202ENST00000483117 SUMO4Q6EEV6 95 aa4.07□□□□□ -1.76
LAPTM4A-202ENST00000483117 FAM90A1Q86YD7 464 aa4.07□□□□□ -1.76
LAPTM4A-202ENST00000483117 C3orf20Q8ND61 904 aa4.07□□□□□ -1.76
LAPTM4A-202ENST00000483117 KLHDC4Q8TBB5 520 aa4.07□□□□□ -1.76
LAPTM4A-202ENST00000483117 TNPO1Q92973 898 aaKnown RBP4.07□□□□□ -1.76
LAPTM4A-202ENST00000483117 FAM136AQ96C01 138 aa4.07□□□□□ -1.76
LAPTM4A-202ENST00000483117 TINAGL1Q9GZM7 467 aaPredicted RBP4.07□□□□□ -1.76
LAPTM4A-202ENST00000483117 ARHGEF3Q9NR81 526 aa4.07□□□□□ -1.76
LAPTM4A-202ENST00000483117 SERTAD4Q9NUC0 356 aa4.07□□□□□ -1.76
LAPTM4A-202ENST00000483117 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.07□□□□□ -1.76
LAPTM4A-202ENST00000483117 RAD54BQ9Y620 910 aa4.07□□□□□ -1.76
LAPTM4A-202ENST00000483117 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.06□□□□□ -1.76
LAPTM4A-202ENST00000483117 M0QYG6 137 aa4.06□□□□□ -1.76
LAPTM4A-202ENST00000483117 PPM1DO15297 605 aa4.06□□□□□ -1.76
LAPTM4A-202ENST00000483117 PRR35P0CG20 571 aa4.06□□□□□ -1.76
LAPTM4A-202ENST00000483117 NHLRC4P0CG21 123 aaPredicted RBP4.06□□□□□ -1.76
LAPTM4A-202ENST00000483117 NDUFB7P17568 137 aa4.06□□□□□ -1.76
LAPTM4A-202ENST00000483117 ITGB6P18564 788 aa4.06□□□□□ -1.76
LAPTM4A-202ENST00000483117 PLAC9Q5JTB6 97 aa4.06□□□□□ -1.76
LAPTM4A-202ENST00000483117 ZNF626Q68DY1 528 aa4.06□□□□□ -1.76
LAPTM4A-202ENST00000483117 ZNF551Q7Z340 670 aaPredicted RBP4.06□□□□□ -1.76
LAPTM4A-202ENST00000483117 PPP1R32Q7Z5V6 425 aa4.06□□□□□ -1.76
LAPTM4A-202ENST00000483117 FAM109AQ8N4B1 249 aa4.06□□□□□ -1.76
LAPTM4A-202ENST00000483117 PRPF38AQ8NAV1 312 aaKnown RBP4.06□□□□□ -1.76
LAPTM4A-202ENST00000483117 SH3BP4Q9P0V3 963 aa4.06□□□□□ -1.76
LAPTM4A-202ENST00000483117 ABCF2Q9UG63 623 aa4.06□□□□□ -1.76
LAPTM4A-202ENST00000483117 POLHQ9Y253 713 aa4.06□□□□□ -1.76
LAPTM4A-202ENST00000483117 FNDC1Q4ZHG4 1894 aaPredicted RBP4.06□□□□□ -1.76
LAPTM4A-202ENST00000483117 ZNF804BA4D1E1 1349 aa4.05□□□□□ -1.76
LAPTM4A-202ENST00000483117 TP73O15350 636 aa4.05□□□□□ -1.76
LAPTM4A-202ENST00000483117 SOAT2O75908 522 aa4.05□□□□□ -1.76
LAPTM4A-202ENST00000483117 MPGP29372 298 aa4.05□□□□□ -1.76
LAPTM4A-202ENST00000483117 GCLCP48506 637 aaPredicted RBP4.05□□□□□ -1.76
LAPTM4A-202ENST00000483117 SSBP2P81877 361 aaPredicted RBP4.05□□□□□ -1.76
LAPTM4A-202ENST00000483117 TCF15Q12870 199 aa4.05□□□□□ -1.76
LAPTM4A-202ENST00000483117 NOGQ13253 232 aa4.05□□□□□ -1.76
LAPTM4A-202ENST00000483117 PROSER3Q2NL68 480 aa4.05□□□□□ -1.76
LAPTM4A-202ENST00000483117 TMEM108Q6UXF1 575 aa4.05□□□□□ -1.76
LAPTM4A-202ENST00000483117 ZNF66Q6ZN08 573 aa4.05□□□□□ -1.76
LAPTM4A-202ENST00000483117 HEATR3Q7Z4Q2 680 aa4.05□□□□□ -1.76
LAPTM4A-202ENST00000483117 USP37Q86T82 979 aa4.05□□□□□ -1.76
LAPTM4A-202ENST00000483117 MIER2Q8N344 545 aa4.05□□□□□ -1.76
LAPTM4A-202ENST00000483117 ZNF366Q8N895 744 aa4.05□□□□□ -1.76
LAPTM4A-202ENST00000483117 FAM46DQ8NEK8 389 aa4.05□□□□□ -1.76
LAPTM4A-202ENST00000483117 REPS1Q96D71 796 aa4.05□□□□□ -1.76
LAPTM4A-202ENST00000483117 SMAD5Q99717 465 aaKnown RBP4.05□□□□□ -1.76
LAPTM4A-202ENST00000483117 SLC13A1Q9BZW2 595 aa4.05□□□□□ -1.76
LAPTM4A-202ENST00000483117 MRPL46Q9H2W6 279 aaKnown RBP4.05□□□□□ -1.76
LAPTM4A-202ENST00000483117 SBNO2Q9Y2G9 1366 aa4.04□□□□□ -1.76
LAPTM4A-202ENST00000483117 SMIM22K7EJ46 135 aa4.04□□□□□ -1.76
LAPTM4A-202ENST00000483117 ZNF213O14771 459 aa4.04□□□□□ -1.76
LAPTM4A-202ENST00000483117 ARIH2O95376 493 aa4.04□□□□□ -1.76
LAPTM4A-202ENST00000483117 LATS1O95835 1130 aa4.04□□□□□ -1.76
LAPTM4A-202ENST00000483117 AHSGP02765 367 aa4.04□□□□□ -1.76
LAPTM4A-202ENST00000483117 FAM163BP0C2L3 166 aa4.04□□□□□ -1.76
LAPTM4A-202ENST00000483117 FTH1P19P0C7X4 201 aa4.04□□□□□ -1.76
LAPTM4A-202ENST00000483117 PDCP20941 246 aa4.04□□□□□ -1.76
LAPTM4A-202ENST00000483117 CCND1P24385 295 aa4.04□□□□□ -1.76
LAPTM4A-202ENST00000483117 EPHB2P29323 1055 aa4.04□□□□□ -1.76
LAPTM4A-202ENST00000483117 ZNF134P52741 427 aa4.04□□□□□ -1.76
LAPTM4A-202ENST00000483117 HK3P52790 923 aa4.04□□□□□ -1.76
LAPTM4A-202ENST00000483117 AMPD3Q01432 767 aa4.04□□□□□ -1.76
LAPTM4A-202ENST00000483117 SP2Q02086 613 aa4.04□□□□□ -1.76
LAPTM4A-202ENST00000483117 KLF9Q13886 244 aaPredicted RBP4.04□□□□□ -1.76
LAPTM4A-202ENST00000483117 LCE1AQ5T7P2 110 aa4.04□□□□□ -1.76
LAPTM4A-202ENST00000483117 RNF187Q5TA31 235 aaPredicted RBP4.04□□□□□ -1.76
LAPTM4A-202ENST00000483117 CEP85Q6P2H3 762 aa4.04□□□□□ -1.76
LAPTM4A-202ENST00000483117 MAVSQ7Z434 540 aa4.04□□□□□ -1.76
LAPTM4A-202ENST00000483117 PPP1R3BQ86XI6 285 aa4.04□□□□□ -1.76
LAPTM4A-202ENST00000483117 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms