RNA–Protein interactions for RNA: ENST00000482889.1

CLCC1-209, Transcript of chloride channel CLIC like 1, humanhuman

TSL 3

Gene CLCC1, Length 752 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-209ENST00000482889 LSM14BQ9BX40 385 aaKnown RBP4.28□□□□□ -1.72
CLCC1-209ENST00000482889 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.28□□□□□ -1.724e-7■■■■□ 23.1
CLCC1-209ENST00000482889 OR10A2Q9H208 303 aa4.28□□□□□ -1.72
CLCC1-209ENST00000482889 ZHX3Q9H4I2 956 aa4.28□□□□□ -1.72
CLCC1-209ENST00000482889 L2HGDHQ9H9P8 463 aa4.28□□□□□ -1.72
CLCC1-209ENST00000482889 A1CFQ9NQ94 594 aaKnown RBP4.28□□□□□ -1.72
CLCC1-209ENST00000482889 TM7SF3Q9NS93 570 aa4.28□□□□□ -1.72
CLCC1-209ENST00000482889 JKAMPQ9P055 326 aa4.28□□□□□ -1.72
CLCC1-209ENST00000482889 XPR1Q9UBH6 696 aa4.28□□□□□ -1.72
CLCC1-209ENST00000482889 ZMYND8Q9ULU4 1186 aaPredicted RBP4.28□□□□□ -1.72
CLCC1-209ENST00000482889 ZDHHC9Q9Y397 364 aa4.28□□□□□ -1.72
CLCC1-209ENST00000482889 ADAMTS20P59510 1910 aa4.28□□□□□ -1.72
CLCC1-209ENST00000482889 UBE2QL1A1L167 161 aa4.27□□□□□ -1.73
CLCC1-209ENST00000482889 MBD3L4A6NDZ8 208 aaPredicted RBP4.27□□□□□ -1.73
CLCC1-209ENST00000482889 MBD3L3A6NE82 208 aaPredicted RBP4.27□□□□□ -1.73
CLCC1-209ENST00000482889 H7C4K7 107 aa4.27□□□□□ -1.73
CLCC1-209ENST00000482889 M0QYG6 137 aa4.27□□□□□ -1.73
CLCC1-209ENST00000482889 HNRNPDLO14979 420 aaKnown RBP4.27□□□□□ -1.73
CLCC1-209ENST00000482889 DCLK1O15075 740 aa4.27□□□□□ -1.73
CLCC1-209ENST00000482889 EPB41L2O43491 1005 aaKnown RBP4.27□□□□□ -1.73
CLCC1-209ENST00000482889 KCNQ3O43525 872 aa4.27□□□□□ -1.73
CLCC1-209ENST00000482889 NOBOXO60393 691 aa4.27□□□□□ -1.73
CLCC1-209ENST00000482889 VPS4BO75351 444 aa4.27□□□□□ -1.73
CLCC1-209ENST00000482889 AGFG2O95081 481 aa4.27□□□□□ -1.73
CLCC1-209ENST00000482889 CNOT4O95628 575 aaKnown RBP4.27□□□□□ -1.73
CLCC1-209ENST00000482889 CD4P01730 458 aa4.27□□□□□ -1.73
CLCC1-209ENST00000482889 LDHCP07864 332 aa4.27□□□□□ -1.73
CLCC1-209ENST00000482889 ITGA5P08648 1049 aa4.27□□□□□ -1.73
CLCC1-209ENST00000482889 MTHFD1P11586 935 aaKnown RBP4.27□□□□□ -1.73
CLCC1-209ENST00000482889 PECAM1P16284 738 aaPredicted RBP4.27□□□□□ -1.73
CLCC1-209ENST00000482889 GZMKP49863 264 aa4.27□□□□□ -1.73
CLCC1-209ENST00000482889 DDX10Q13206 875 aaKnown RBP4.27□□□□□ -1.73
CLCC1-209ENST00000482889 FHL3Q13643 280 aa4.27□□□□□ -1.73
CLCC1-209ENST00000482889 USP10Q14694 798 aaKnown RBP4.27□□□□□ -1.73
CLCC1-209ENST00000482889 KCNAB1Q14722 419 aa4.27□□□□□ -1.73
CLCC1-209ENST00000482889 NFIXQ14938 502 aa4.27□□□□□ -1.73
CLCC1-209ENST00000482889 UBXN2BQ14CS0 331 aa4.27□□□□□ -1.73
CLCC1-209ENST00000482889 LMBRD2Q68DH5 695 aaPredicted RBP4.27□□□□□ -1.73
CLCC1-209ENST00000482889 KRT40Q6A162 431 aa4.27□□□□□ -1.73
CLCC1-209ENST00000482889 TANGO2Q6ICL3 276 aa4.27□□□□□ -1.73
CLCC1-209ENST00000482889 C1orf122Q6ZSJ8 110 aa4.27□□□□□ -1.73
CLCC1-209ENST00000482889 ZNF365Q70YC5 407 aa4.27□□□□□ -1.73
CLCC1-209ENST00000482889 MAATS1Q7Z4T9 603 aa4.27□□□□□ -1.73
CLCC1-209ENST00000482889 ZNF761Q86XN6 746 aaPredicted RBP4.27□□□□□ -1.73
CLCC1-209ENST00000482889 ZNF280BQ86YH2 543 aa4.27□□□□□ -1.73
CLCC1-209ENST00000482889 ANKRD18AQ8IVF6 992 aa4.27□□□□□ -1.73
CLCC1-209ENST00000482889 HERC6Q8IVU3 1022 aa4.27□□□□□ -1.73
CLCC1-209ENST00000482889 SYT8Q8NBV8 401 aa4.27□□□□□ -1.73
CLCC1-209ENST00000482889 SLC17A8Q8NDX2 589 aa4.27□□□□□ -1.73
CLCC1-209ENST00000482889 NSUN7Q8NE18 718 aaKnown RBP4.27□□□□□ -1.73
CLCC1-209ENST00000482889 PPHLN1Q8NEY8 458 aaKnown RBP4.27□□□□□ -1.73
CLCC1-209ENST00000482889 SCAMP5Q8TAC9 235 aa4.27□□□□□ -1.73
CLCC1-209ENST00000482889 CXorf38Q8TB03 319 aa4.27□□□□□ -1.73
CLCC1-209ENST00000482889 OTUD7AQ8TE49 926 aaPredicted RBP4.27□□□□□ -1.73
CLCC1-209ENST00000482889 ADAMTS17Q8TE56 1095 aa4.27□□□□□ -1.73
CLCC1-209ENST00000482889 PPM1MQ96MI6 270 aa4.27□□□□□ -1.73
CLCC1-209ENST00000482889 FAM167BQ9BTA0 163 aa4.27□□□□□ -1.73
CLCC1-209ENST00000482889 PAGR1Q9BTK6 254 aa4.27□□□□□ -1.73
CLCC1-209ENST00000482889 TLR10Q9BXR5 811 aa4.27□□□□□ -1.73
CLCC1-209ENST00000482889 PACSIN1Q9BY11 444 aa4.27□□□□□ -1.73
CLCC1-209ENST00000482889 TINAGL1Q9GZM7 467 aaPredicted RBP4.27□□□□□ -1.73
CLCC1-209ENST00000482889 MS4A7Q9GZW8 240 aaPredicted RBP4.27□□□□□ -1.73
CLCC1-209ENST00000482889 SERHLQ9NQF3 203 aa4.27□□□□□ -1.73
CLCC1-209ENST00000482889 MOCS1Q9NZB8 636 aa4.27□□□□□ -1.73
CLCC1-209ENST00000482889 LPAR3Q9UBY5 353 aa4.27□□□□□ -1.73
CLCC1-209ENST00000482889 ZNF212Q9UDV6 495 aa4.27□□□□□ -1.73
CLCC1-209ENST00000482889 NRBP1Q9UHY1 535 aa4.27□□□□□ -1.73
CLCC1-209ENST00000482889 ADAM29Q9UKF5 820 aa4.27□□□□□ -1.73
CLCC1-209ENST00000482889 ATP11BQ9Y2G3 1177 aa4.27□□□□□ -1.73
CLCC1-209ENST00000482889 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.27□□□□□ -1.73
CLCC1-209ENST00000482889 CDHR4A6H8M9 788 aa4.26□□□□□ -1.73
CLCC1-209ENST00000482889 C9orf118A6NHY6 69 aa4.26□□□□□ -1.73
CLCC1-209ENST00000482889 RAB27BO00194 218 aa4.26□□□□□ -1.73
CLCC1-209ENST00000482889 HOXA3O43365 443 aaPredicted RBP4.26□□□□□ -1.73
CLCC1-209ENST00000482889 SNX2O60749 519 aa4.26□□□□□ -1.73
CLCC1-209ENST00000482889 RASSF9O75901 435 aa4.26□□□□□ -1.73
CLCC1-209ENST00000482889 ATP1A3P13637 1013 aa4.26□□□□□ -1.73
CLCC1-209ENST00000482889 KLRC1P26715 233 aa4.26□□□□□ -1.73
CLCC1-209ENST00000482889 IL1R2P27930 398 aa4.26□□□□□ -1.73
CLCC1-209ENST00000482889 PRKAA2P54646 552 aa4.26□□□□□ -1.73
CLCC1-209ENST00000482889 MPP1Q00013 466 aa4.26□□□□□ -1.73
CLCC1-209ENST00000482889 TBX2Q13207 712 aaPredicted RBP4.26□□□□□ -1.73
CLCC1-209ENST00000482889 GRM1Q13255 1194 aa4.26□□□□□ -1.73
CLCC1-209ENST00000482889 RAB32Q13637 225 aa4.26□□□□□ -1.73
CLCC1-209ENST00000482889 CNGB1Q14028 1251 aaPredicted RBP4.26□□□□□ -1.73
CLCC1-209ENST00000482889 HABP2Q14520 560 aaPredicted RBP4.26□□□□□ -1.73
CLCC1-209ENST00000482889 FAM110CQ1W6H9 321 aa4.26□□□□□ -1.73
CLCC1-209ENST00000482889 NOMO2Q5JPE7 1267 aa4.26□□□□□ -1.73
CLCC1-209ENST00000482889 GPATCH4Q5T3I0 446 aaKnown RBP4.26□□□□□ -1.73
CLCC1-209ENST00000482889 INTS11Q5TA45 600 aaKnown RBP4.26□□□□□ -1.73
CLCC1-209ENST00000482889 NT5DC1Q5TFE4 455 aa4.26□□□□□ -1.73
CLCC1-209ENST00000482889 PLAG1Q6DJT9 500 aa4.26□□□□□ -1.73
CLCC1-209ENST00000482889 RETSATQ6NUM9 610 aa4.26□□□□□ -1.73
CLCC1-209ENST00000482889 FBXO38Q6PIJ6 1188 aa4.26□□□□□ -1.73
CLCC1-209ENST00000482889 RFX8Q6ZV50 586 aa4.26□□□□□ -1.73
CLCC1-209ENST00000482889 KRT28Q7Z3Y7 464 aa4.26□□□□□ -1.73
CLCC1-209ENST00000482889 PPP1R32Q7Z5V6 425 aa4.26□□□□□ -1.73
CLCC1-209ENST00000482889 TBC1D1Q86TI0 1168 aaPredicted RBP4.26□□□□□ -1.73
CLCC1-209ENST00000482889 HEATR4Q86WZ0 1026 aa4.26□□□□□ -1.73
CLCC1-209ENST00000482889 GPR135Q8IZ08 494 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms