RNA–Protein interactions for RNA: ENST00000482655.2

GTF3A-207, Transcript of general transcription factor IIIA, humanhuman

TSL 2

Gene GTF3A, Length 829 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-207ENST00000482655 DSC2Q02487 901 aa4.71□□□□□ -1.66
GTF3A-207ENST00000482655 TAP2Q03519 686 aa4.71□□□□□ -1.66
GTF3A-207ENST00000482655 ITIH3Q06033 890 aa4.71□□□□□ -1.66
GTF3A-207ENST00000482655 SNAPC2Q13487 334 aa4.71□□□□□ -1.66
GTF3A-207ENST00000482655 MYO1HQ8N1T3 1032 aa4.71□□□□□ -1.66
GTF3A-207ENST00000482655 TFAP2BQ92481 460 aa4.71□□□□□ -1.66
GTF3A-207ENST00000482655 LPIN2Q92539 896 aa4.71□□□□□ -1.66
GTF3A-207ENST00000482655 RGMAQ96B86 450 aa4.71□□□□□ -1.66
GTF3A-207ENST00000482655 CAMKK2Q96RR4 588 aa4.71□□□□□ -1.66
GTF3A-207ENST00000482655 LRFN3Q9BTN0 628 aa4.71□□□□□ -1.66
GTF3A-207ENST00000482655 CNPPD1Q9BV87 410 aa4.71□□□□□ -1.66
GTF3A-207ENST00000482655 GOLGA6AQ9NYA3 693 aa4.71□□□□□ -1.66
GTF3A-207ENST00000482655 LUC7L2Q9Y383 392 aaKnown RBP4.71□□□□□ -1.66
GTF3A-207ENST00000482655 CUL7Q14999 1698 aa4.7□□□□□ -1.66
GTF3A-207ENST00000482655 LRRC14BA6NHZ5 514 aa4.7□□□□□ -1.66
GTF3A-207ENST00000482655 NT5C1B-RDH14C9J2C7 533 aa4.7□□□□□ -1.66
GTF3A-207ENST00000482655 PROM1O43490 865 aa4.7□□□□□ -1.66
GTF3A-207ENST00000482655 SCGB1D2O95969 90 aa4.7□□□□□ -1.66
GTF3A-207ENST00000482655 IGLV2-14P01704 120 aa4.7□□□□□ -1.66
GTF3A-207ENST00000482655 GNAI2P04899 355 aa4.7□□□□□ -1.66
GTF3A-207ENST00000482655 CHRM2P08172 466 aa4.7□□□□□ -1.66
GTF3A-207ENST00000482655 PPP3CBP16298 524 aa4.7□□□□□ -1.66
GTF3A-207ENST00000482655 ATF3P18847 181 aa4.7□□□□□ -1.66
GTF3A-207ENST00000482655 PDCP20941 246 aa4.7□□□□□ -1.66
GTF3A-207ENST00000482655 FXR1P51114 621 aaKnown RBP eCLIP4.7□□□□□ -1.66
GTF3A-207ENST00000482655 CCDC157Q569K6 752 aa4.7□□□□□ -1.66
GTF3A-207ENST00000482655 KIAA0895LQ68EN5 471 aa4.7□□□□□ -1.66
GTF3A-207ENST00000482655 PEG10Q86TG7 708 aaKnown RBP4.7□□□□□ -1.66
GTF3A-207ENST00000482655 RAVER1Q8IY67 606 aaKnown RBP4.7□□□□□ -1.66
GTF3A-207ENST00000482655 MYCBPAPQ8TBZ2 947 aa4.7□□□□□ -1.66
GTF3A-207ENST00000482655 TSR2Q969E8 191 aaKnown RBP4.7□□□□□ -1.66
GTF3A-207ENST00000482655 CDH19Q9H159 772 aa4.7□□□□□ -1.66
GTF3A-207ENST00000482655 KLK15Q9H2R5 256 aa4.7□□□□□ -1.66
GTF3A-207ENST00000482655 WDCPQ9H6R7 721 aa4.7□□□□□ -1.66
GTF3A-207ENST00000482655 KMT5AQ9NQR1 393 aa4.7□□□□□ -1.66
GTF3A-207ENST00000482655 SEMA4GQ9NTN9 838 aa4.7□□□□□ -1.66
GTF3A-207ENST00000482655 VSX1Q9NZR4 365 aaPredicted RBP4.7□□□□□ -1.66
GTF3A-207ENST00000482655 PCDHA3Q9Y5H8 950 aa4.7□□□□□ -1.66
GTF3A-207ENST00000482655 NR2E3Q9Y5X4 410 aa4.7□□□□□ -1.66
GTF3A-207ENST00000482655 KIF21BO75037 1637 aa4.7□□□□□ -1.66
GTF3A-207ENST00000482655 TOP2BQ02880 1626 aa4.69□□□□□ -1.66
GTF3A-207ENST00000482655 EPRSP07814 1512 aaKnown RBP4.69□□□□□ -1.66
GTF3A-207ENST00000482655 A0A0B4J269 797 aa4.69□□□□□ -1.66
GTF3A-207ENST00000482655 E9PLN8 166 aa4.69□□□□□ -1.66
GTF3A-207ENST00000482655 F5H697 171 aa4.69□□□□□ -1.66
GTF3A-207ENST00000482655 TRIAP1O43715 76 aa4.69□□□□□ -1.66
GTF3A-207ENST00000482655 FTLP02792 175 aaPredicted RBP4.69□□□□□ -1.66
GTF3A-207ENST00000482655 RARBP10826 455 aa4.69□□□□□ -1.66
GTF3A-207ENST00000482655 VCAM1P19320 739 aa4.69□□□□□ -1.66
GTF3A-207ENST00000482655 ITGALP20701 1170 aa4.69□□□□□ -1.66
GTF3A-207ENST00000482655 GRIA3P42263 894 aa4.69□□□□□ -1.66
GTF3A-207ENST00000482655 MAPK10P53779 464 aa4.69□□□□□ -1.66
GTF3A-207ENST00000482655 NXPH1P58417 271 aa4.69□□□□□ -1.66
GTF3A-207ENST00000482655 NOGQ13253 232 aa4.69□□□□□ -1.66
GTF3A-207ENST00000482655 TUBB3Q13509 450 aa4.69□□□□□ -1.66
GTF3A-207ENST00000482655 PTPRRQ15256 657 aa4.69□□□□□ -1.66
GTF3A-207ENST00000482655 TMEM240Q5SV17 173 aa4.69□□□□□ -1.66
GTF3A-207ENST00000482655 ZNF362Q5T0B9 420 aaPredicted RBP4.69□□□□□ -1.66
GTF3A-207ENST00000482655 SLC30A10Q6XR72 485 aa4.69□□□□□ -1.66
GTF3A-207ENST00000482655 TSHZ1Q6ZSZ6 1077 aa4.69□□□□□ -1.66
GTF3A-207ENST00000482655 USP45Q70EL2 814 aa4.69□□□□□ -1.66
GTF3A-207ENST00000482655 HEATR3Q7Z4Q2 680 aa4.69□□□□□ -1.66
GTF3A-207ENST00000482655 FAM9AQ8IZU1 332 aaPredicted RBP4.69□□□□□ -1.66
GTF3A-207ENST00000482655 FAM98AQ8NCA5 519 aaKnown RBP4.69□□□□□ -1.66
GTF3A-207ENST00000482655 ZNF384Q8TF68 577 aa4.69□□□□□ -1.66
GTF3A-207ENST00000482655 NTN5Q8WTR8 489 aaPredicted RBP4.69□□□□□ -1.66
GTF3A-207ENST00000482655 TNPO1Q92973 898 aaKnown RBP4.69□□□□□ -1.66
GTF3A-207ENST00000482655 HSPBAP1Q96EW2 488 aa4.69□□□□□ -1.66
GTF3A-207ENST00000482655 UROC1Q96N76 676 aa4.69□□□□□ -1.66
GTF3A-207ENST00000482655 VKORC1Q9BQB6 163 aa4.69□□□□□ -1.66
GTF3A-207ENST00000482655 TPSD1Q9BZJ3 242 aa4.69□□□□□ -1.66
GTF3A-207ENST00000482655 ALG13Q9NP73 1137 aaKnown RBP4.69□□□□□ -1.66
GTF3A-207ENST00000482655 IL17RBQ9NRM6 502 aa4.69□□□□□ -1.66
GTF3A-207ENST00000482655 ASB6Q9NWX5 421 aa4.69□□□□□ -1.66
GTF3A-207ENST00000482655 ABCF2Q9UG63 623 aa4.69□□□□□ -1.66
GTF3A-207ENST00000482655 IP6K2Q9UHH9 426 aa4.69□□□□□ -1.66
GTF3A-207ENST00000482655 ADAMTSL3P82987 1691 aa4.69□□□□□ -1.66
GTF3A-207ENST00000482655 SOAT2O75908 522 aa4.68□□□□□ -1.66
GTF3A-207ENST00000482655 ZNF37AP17032 561 aaPredicted RBP4.68□□□□□ -1.66
GTF3A-207ENST00000482655 GPD1P21695 349 aa4.68□□□□□ -1.66
GTF3A-207ENST00000482655 PRDX5P30044 214 aa4.68□□□□□ -1.66
GTF3A-207ENST00000482655 PHKA1P46020 1223 aa4.68□□□□□ -1.66
GTF3A-207ENST00000482655 NDUFV1P49821 464 aa4.68□□□□□ -1.66
GTF3A-207ENST00000482655 HK3P52790 923 aa4.68□□□□□ -1.66
GTF3A-207ENST00000482655 TBX4P57082 545 aa4.68□□□□□ -1.66
GTF3A-207ENST00000482655 PGS1Q32NB8 556 aa4.68□□□□□ -1.66
GTF3A-207ENST00000482655 CCDC146Q8IYE0 955 aa4.68□□□□□ -1.66
GTF3A-207ENST00000482655 CPA6Q8N4T0 437 aa4.68□□□□□ -1.66
GTF3A-207ENST00000482655 PSD4Q8NDX1 1056 aa4.68□□□□□ -1.66
GTF3A-207ENST00000482655 POC1BQ8TC44 478 aa4.68□□□□□ -1.66
GTF3A-207ENST00000482655 JPH3Q8WXH2 748 aaPredicted RBP4.68□□□□□ -1.66
GTF3A-207ENST00000482655 DDX17Q92841 729 aaKnown RBP4.68□□□□□ -1.66
GTF3A-207ENST00000482655 FAM167AQ96KS9 214 aa4.68□□□□□ -1.66
GTF3A-207ENST00000482655 C1orf43Q9BWL3 253 aa4.68□□□□□ -1.66
GTF3A-207ENST00000482655 CPNE5Q9HCH3 593 aa4.68□□□□□ -1.66
GTF3A-207ENST00000482655 LMBRD1Q9NUN5 540 aa4.68□□□□□ -1.66
GTF3A-207ENST00000482655 ZDHHC8Q9ULC8 765 aa4.68□□□□□ -1.66
GTF3A-207ENST00000482655 ANKRD6Q9Y2G4 727 aa4.68□□□□□ -1.66
GTF3A-207ENST00000482655 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.68□□□□□ -1.66
GTF3A-207ENST00000482655 ENTPD2Q9Y5L3 495 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms