RNA–Protein interactions for RNA: ENST00000482614.5

EXOSC3-205, Transcript of exosome component 3, humanhuman

TSL 5

Gene EXOSC3, Length 462 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-205ENST00000482614 FAM84AQ96KN4 292 aa16.5■□□□□ 0.23
EXOSC3-205ENST00000482614 ASB16Q96NS5 453 aa16.5■□□□□ 0.23
EXOSC3-205ENST00000482614 SEPT5Q99719 369 aaPredicted RBP16.5■□□□□ 0.23
EXOSC3-205ENST00000482614 ACBD6Q9BR61 282 aa16.5■□□□□ 0.23
EXOSC3-205ENST00000482614 PLA2G2FQ9BZM2 168 aa16.5■□□□□ 0.23
EXOSC3-205ENST00000482614 TBC1D17Q9HA65 648 aa16.5■□□□□ 0.23
EXOSC3-205ENST00000482614 DDX43Q9NXZ2 648 aaKnown RBP16.5■□□□□ 0.23
EXOSC3-205ENST00000482614 PCDHB5Q9Y5E4 795 aa16.5■□□□□ 0.23
EXOSC3-205ENST00000482614 SNX9Q9Y5X1 595 aa16.5■□□□□ 0.23
EXOSC3-205ENST00000482614 PTPRJQ12913 1337 aa16.49■□□□□ 0.23
EXOSC3-205ENST00000482614 A0A1W2PQ27 194 aa16.49■□□□□ 0.23
EXOSC3-205ENST00000482614 A0A1W2PQ64 194 aa16.49■□□□□ 0.23
EXOSC3-205ENST00000482614 A0A1W2PQD8 194 aa16.49■□□□□ 0.23
EXOSC3-205ENST00000482614 SOAT2O75908 522 aa16.49■□□□□ 0.23
EXOSC3-205ENST00000482614 DLATP10515 647 aaKnown RBP16.49■□□□□ 0.23
EXOSC3-205ENST00000482614 HAPLN1P10915 354 aaPredicted RBP16.49■□□□□ 0.23
EXOSC3-205ENST00000482614 GJA1P17302 382 aa16.49■□□□□ 0.23
EXOSC3-205ENST00000482614 LHX1P48742 406 aa16.49■□□□□ 0.23
EXOSC3-205ENST00000482614 NDUFA8P51970 172 aa16.49■□□□□ 0.23
EXOSC3-205ENST00000482614 STARD6P59095 220 aa16.49■□□□□ 0.23
EXOSC3-205ENST00000482614 PRKCQQ04759 706 aa16.49■□□□□ 0.23
EXOSC3-205ENST00000482614 CYP24A1Q07973 514 aa16.49■□□□□ 0.23
EXOSC3-205ENST00000482614 STK4Q13043 487 aa16.49■□□□□ 0.23
EXOSC3-205ENST00000482614 VEPH1Q14D04 833 aa16.49■□□□□ 0.23
EXOSC3-205ENST00000482614 TEAD2Q15562 447 aa16.49■□□□□ 0.23
EXOSC3-205ENST00000482614 NFE2Q16621 373 aaPredicted RBP16.49■□□□□ 0.23
EXOSC3-205ENST00000482614 SLC44A4Q53GD3 710 aa16.49■□□□□ 0.23
EXOSC3-205ENST00000482614 SCARA3Q6AZY7 606 aa16.49■□□□□ 0.23
EXOSC3-205ENST00000482614 TRAPPC11Q7Z392 1133 aa16.49■□□□□ 0.23
EXOSC3-205ENST00000482614 SHKBP1Q8TBC3 707 aa16.49■□□□□ 0.23
EXOSC3-205ENST00000482614 SMARCD2Q92925 531 aa16.49■□□□□ 0.23
EXOSC3-205ENST00000482614 CCDC47Q96A33 483 aaKnown RBP16.49■□□□□ 0.23
EXOSC3-205ENST00000482614 HPDLQ96IR7 371 aa16.49■□□□□ 0.23
EXOSC3-205ENST00000482614 CGRRF1Q99675 332 aa16.49■□□□□ 0.23
EXOSC3-205ENST00000482614 ABI2Q9NYB9 513 aaPredicted RBP16.49■□□□□ 0.23
EXOSC3-205ENST00000482614 A0A1W2PRU2 124 aa16.48■□□□□ 0.23
EXOSC3-205ENST00000482614 NRG2O14511 850 aaPredicted RBP16.48■□□□□ 0.23
EXOSC3-205ENST00000482614 EXOC3O60645 756 aa16.48■□□□□ 0.23
EXOSC3-205ENST00000482614 FCARP24071 287 aa16.48■□□□□ 0.23
EXOSC3-205ENST00000482614 SNW1Q13573 536 aaKnown RBP16.48■□□□□ 0.23
EXOSC3-205ENST00000482614 MLF2Q15773 248 aaPredicted RBP16.48■□□□□ 0.23
EXOSC3-205ENST00000482614 TAF12Q16514 161 aa16.48■□□□□ 0.23
EXOSC3-205ENST00000482614 ALYREFQ86V81 257 aaKnown RBP16.48■□□□□ 0.23
EXOSC3-205ENST00000482614 CCDC105Q8IYK2 499 aa16.48■□□□□ 0.23
EXOSC3-205ENST00000482614 ADGRF2Q8IZF7 708 aa16.48■□□□□ 0.23
EXOSC3-205ENST00000482614 FSIP1Q8NA03 581 aa16.48■□□□□ 0.23
EXOSC3-205ENST00000482614 KIAA0895Q8NCT3 520 aa16.48■□□□□ 0.23
EXOSC3-205ENST00000482614 ZSCAN18Q8TBC5 510 aaPredicted RBP16.48■□□□□ 0.23
EXOSC3-205ENST00000482614 ATOH1Q92858 354 aaPredicted RBP16.48■□□□□ 0.23
EXOSC3-205ENST00000482614 E2F7Q96AV8 911 aa16.48■□□□□ 0.23
EXOSC3-205ENST00000482614 ZSWIM3Q96MP5 696 aa16.48■□□□□ 0.23
EXOSC3-205ENST00000482614 SLITRK6Q9H5Y7 841 aa16.48■□□□□ 0.23
EXOSC3-205ENST00000482614 TRPV4Q9HBA0 871 aa16.48■□□□□ 0.23
EXOSC3-205ENST00000482614 SIT1Q9Y3P8 196 aa16.48■□□□□ 0.23
EXOSC3-205ENST00000482614 H0Y858 1186 aa16.47■□□□□ 0.23
EXOSC3-205ENST00000482614 GABRDO14764 452 aa16.47■□□□□ 0.23
EXOSC3-205ENST00000482614 RPN1P04843 607 aaKnown RBP16.47■□□□□ 0.23
EXOSC3-205ENST00000482614 ATF6P18850 670 aa16.47■□□□□ 0.23
EXOSC3-205ENST00000482614 GABRR2P28476 465 aa16.47■□□□□ 0.23
EXOSC3-205ENST00000482614 PCSK1P29120 753 aa16.47■□□□□ 0.23
EXOSC3-205ENST00000482614 SOWAHAQ2M3V2 549 aa16.47■□□□□ 0.23
EXOSC3-205ENST00000482614 ARHGAP15Q53QZ3 475 aa16.47■□□□□ 0.23
EXOSC3-205ENST00000482614 INTS6LQ5JSJ4 861 aaKnown RBP16.47■□□□□ 0.23
EXOSC3-205ENST00000482614 OSTM1Q86WC4 334 aa16.47■□□□□ 0.23
EXOSC3-205ENST00000482614 DTWD2Q8NBA8 298 aa16.47■□□□□ 0.23
EXOSC3-205ENST00000482614 DEPDC1BQ8WUY9 529 aa16.47■□□□□ 0.23
EXOSC3-205ENST00000482614 DNASE1L2Q92874 299 aa16.47■□□□□ 0.23
EXOSC3-205ENST00000482614 CCDC127Q96BQ5 260 aa16.47■□□□□ 0.23
EXOSC3-205ENST00000482614 LPIN3Q9BQK8 851 aa16.47■□□□□ 0.23
EXOSC3-205ENST00000482614 TRMT61BQ9BVS5 477 aaKnown RBP16.47■□□□□ 0.23
EXOSC3-205ENST00000482614 ATXN3LQ9H3M9 355 aa16.47■□□□□ 0.23
EXOSC3-205ENST00000482614 ZNF334Q9HCZ1 680 aaPredicted RBP16.47■□□□□ 0.23
EXOSC3-205ENST00000482614 TMLHEQ9NVH6 421 aa16.47■□□□□ 0.23
EXOSC3-205ENST00000482614 WDFY4Q6ZS81 3184 aa16.47■□□□□ 0.23
EXOSC3-205ENST00000482614 KANSL1LA0AUZ9 987 aa16.46■□□□□ 0.23
EXOSC3-205ENST00000482614 PDXKO00764 312 aa16.46■□□□□ 0.23
EXOSC3-205ENST00000482614 KIF20AO95235 890 aa16.46■□□□□ 0.23
EXOSC3-205ENST00000482614 CST3P01034 146 aaPredicted RBP16.46■□□□□ 0.23
EXOSC3-205ENST00000482614 PSMC3P17980 439 aa16.46■□□□□ 0.23
EXOSC3-205ENST00000482614 ACAT1P24752 427 aaKnown RBP16.46■□□□□ 0.23
EXOSC3-205ENST00000482614 CDC25CP30307 473 aa16.46■□□□□ 0.23
EXOSC3-205ENST00000482614 MRE11P49959 708 aa16.46■□□□□ 0.23
EXOSC3-205ENST00000482614 CDR1P51861 262 aa16.46■□□□□ 0.23
EXOSC3-205ENST00000482614 NUCB2P80303 420 aa16.46■□□□□ 0.23
EXOSC3-205ENST00000482614 KRBA2Q6ZNG9 492 aa16.46■□□□□ 0.23
EXOSC3-205ENST00000482614 GAREM2Q75VX8 874 aa16.46■□□□□ 0.23
EXOSC3-205ENST00000482614 LIMS2Q7Z4I7 341 aa16.46■□□□□ 0.23
EXOSC3-205ENST00000482614 SLC9A9Q8IVB4 645 aa16.46■□□□□ 0.23
EXOSC3-205ENST00000482614 GIPC2Q8TF65 315 aa16.46■□□□□ 0.23
EXOSC3-205ENST00000482614 TMEM174Q8WUU8 243 aa16.46■□□□□ 0.23
EXOSC3-205ENST00000482614 CCDC34Q96HJ3 373 aa16.46■□□□□ 0.23
EXOSC3-205ENST00000482614 GCNAQ96QF7 691 aa16.46■□□□□ 0.23
EXOSC3-205ENST00000482614 PI4K2AQ9BTU6 479 aa16.46■□□□□ 0.23
EXOSC3-205ENST00000482614 DDX23Q9BUQ8 820 aaKnown RBP16.46■□□□□ 0.23
EXOSC3-205ENST00000482614 BRD9Q9H8M2 597 aa16.46■□□□□ 0.23
EXOSC3-205ENST00000482614 ABCB6Q9NP58 842 aa16.46■□□□□ 0.23
EXOSC3-205ENST00000482614 ZNF202O95125 648 aa16.45■□□□□ 0.22
EXOSC3-205ENST00000482614 FAM163BP0C2L3 166 aa16.45■□□□□ 0.22
EXOSC3-205ENST00000482614 VIPR2P41587 438 aa16.45■□□□□ 0.22
EXOSC3-205ENST00000482614 AP3M2P53677 418 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms