RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 CCDC189A1A4V9 331 aa13.36□□□□□ -0.27
VPS52-218ENST00000482399 WDR64B1ANS9 1081 aa13.36□□□□□ -0.27
VPS52-218ENST00000482399 ASMTLO95671 621 aa13.36□□□□□ -0.27
VPS52-218ENST00000482399 FDX1P10109 184 aa13.36□□□□□ -0.27
VPS52-218ENST00000482399 PYGBP11216 843 aa13.36□□□□□ -0.27
VPS52-218ENST00000482399 CHRNA5P30532 468 aa13.36□□□□□ -0.27
VPS52-218ENST00000482399 ATXN3P54252 364 aaPredicted RBP13.36□□□□□ -0.27
VPS52-218ENST00000482399 RPS6P62753 249 aaKnown RBP13.36□□□□□ -0.27
VPS52-218ENST00000482399 OTUD4Q01804 1114 aaKnown RBP13.36□□□□□ -0.27
VPS52-218ENST00000482399 CENPCQ03188 943 aa13.36□□□□□ -0.27
VPS52-218ENST00000482399 CYP24A1Q07973 514 aa13.36□□□□□ -0.27
VPS52-218ENST00000482399 PTK7Q13308 1070 aa13.36□□□□□ -0.27
VPS52-218ENST00000482399 ANO7Q6IWH7 933 aa13.36□□□□□ -0.27
VPS52-218ENST00000482399 FAM43BQ6ZT52 329 aaPredicted RBP13.36□□□□□ -0.27
VPS52-218ENST00000482399 PODNQ7Z5L7 613 aa13.36□□□□□ -0.27
VPS52-218ENST00000482399 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.36□□□□□ -0.27
VPS52-218ENST00000482399 MECRQ9BV79 373 aa13.36□□□□□ -0.27
VPS52-218ENST00000482399 POLR3FQ9H1D9 316 aaPredicted RBP13.36□□□□□ -0.27
VPS52-218ENST00000482399 PPP1R1BQ9UD71 204 aaPredicted RBP13.36□□□□□ -0.27
VPS52-218ENST00000482399 AGO2Q9UKV8 859 aaKnown RBP13.36□□□□□ -0.27
VPS52-218ENST00000482399 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.36□□□□□ -0.27
VPS52-218ENST00000482399 DNALI1O14645 258 aaPredicted RBP13.36□□□□□ -0.27
VPS52-218ENST00000482399 PAPOLAP51003 745 aaKnown RBP13.36□□□□□ -0.27
VPS52-218ENST00000482399 MRPS35P82673 323 aaKnown RBP13.36□□□□□ -0.27
VPS52-218ENST00000482399 PRKG1Q13976 671 aa13.36□□□□□ -0.27
VPS52-218ENST00000482399 SLC15A2Q16348 729 aa13.36□□□□□ -0.27
VPS52-218ENST00000482399 ARMC3Q5W041 872 aa13.36□□□□□ -0.27
VPS52-218ENST00000482399 CLNKQ7Z7G1 428 aa13.36□□□□□ -0.27
VPS52-218ENST00000482399 THNSL1Q8IYQ7 743 aa13.36□□□□□ -0.27
VPS52-218ENST00000482399 ZCCHC9Q8N567 271 aaKnown RBP13.36□□□□□ -0.27
VPS52-218ENST00000482399 PRR11Q96HE9 360 aaPredicted RBP13.36□□□□□ -0.27
VPS52-218ENST00000482399 ZDHHC15Q96MV8 337 aa13.36□□□□□ -0.27
VPS52-218ENST00000482399 PARVAQ9NVD7 372 aa13.36□□□□□ -0.27
VPS52-218ENST00000482399 KCND2Q9NZV8 630 aa13.36□□□□□ -0.27
VPS52-218ENST00000482399 STARD13Q9Y3M8 1113 aa13.36□□□□□ -0.27
VPS52-218ENST00000482399 SCINQ9Y6U3 715 aa13.36□□□□□ -0.27
VPS52-218ENST00000482399 UBE4BO95155 1302 aa13.36□□□□□ -0.27
VPS52-218ENST00000482399 LOC100653049A0A140TA62 436 aa13.36□□□□□ -0.27
VPS52-218ENST00000482399 MEI4A8MW99 385 aa13.36□□□□□ -0.27
VPS52-218ENST00000482399 KRT34O76011 436 aa13.36□□□□□ -0.27
VPS52-218ENST00000482399 SRGAP2CP0DJJ0 459 aa13.36□□□□□ -0.27
VPS52-218ENST00000482399 VHLP40337 213 aa13.36□□□□□ -0.27
VPS52-218ENST00000482399 NLRP11P59045 1033 aaKnown RBP13.36□□□□□ -0.27
VPS52-218ENST00000482399 MAMLD1Q13495 774 aa13.36□□□□□ -0.27
VPS52-218ENST00000482399 PDK4Q16654 411 aa13.36□□□□□ -0.27
VPS52-218ENST00000482399 ZCCHC23Q6ZST2 131 aa13.36□□□□□ -0.27
VPS52-218ENST00000482399 ARHGAP24Q8N264 748 aa13.36□□□□□ -0.27
VPS52-218ENST00000482399 NSL1Q96IY1 281 aa13.36□□□□□ -0.27
VPS52-218ENST00000482399 RIT2Q99578 217 aa13.36□□□□□ -0.27
VPS52-218ENST00000482399 SYT15Q9BQS2 421 aa13.36□□□□□ -0.27
VPS52-218ENST00000482399 LRMDAQ9H2I8 198 aa13.36□□□□□ -0.27
VPS52-218ENST00000482399 CORO1CQ9ULV4 474 aaPredicted RBP13.36□□□□□ -0.27
VPS52-218ENST00000482399 UMODL1Q5DID0 1318 aa13.35□□□□□ -0.27
VPS52-218ENST00000482399 SLC26A4O43511 780 aa13.35□□□□□ -0.27
VPS52-218ENST00000482399 IVDP26440 423 aa13.35□□□□□ -0.27
VPS52-218ENST00000482399 MMP14P50281 582 aa13.35□□□□□ -0.27
VPS52-218ENST00000482399 ANKRD22Q5VYY1 191 aa13.35□□□□□ -0.27
VPS52-218ENST00000482399 ALYREFQ86V81 257 aaKnown RBP13.35□□□□□ -0.27
VPS52-218ENST00000482399 SLC9A9Q8IVB4 645 aa13.35□□□□□ -0.27
VPS52-218ENST00000482399 EFCAB3Q8N7B9 438 aa13.35□□□□□ -0.27
VPS52-218ENST00000482399 OLIG1Q8TAK6 271 aa13.35□□□□□ -0.27
VPS52-218ENST00000482399 FAF2Q96CS3 445 aa13.35□□□□□ -0.27
VPS52-218ENST00000482399 PPP1R36Q96LQ0 422 aa13.35□□□□□ -0.27
VPS52-218ENST00000482399 COL20A1Q9P218 1284 aa13.35□□□□□ -0.27
VPS52-218ENST00000482399 IP6K2Q9UHH9 426 aa13.35□□□□□ -0.27
VPS52-218ENST00000482399 GRID1Q9ULK0 1009 aa13.35□□□□□ -0.27
VPS52-218ENST00000482399 WASF2Q9Y6W5 498 aa13.35□□□□□ -0.27
VPS52-218ENST00000482399 AVILO75366 819 aa13.35□□□□□ -0.27
VPS52-218ENST00000482399 VIL1P09327 827 aaKnown RBP13.35□□□□□ -0.27
VPS52-218ENST00000482399 GPAT2Q6NUI2 795 aa13.35□□□□□ -0.27
VPS52-218ENST00000482399 RGS9BPQ6ZS82 235 aa13.35□□□□□ -0.27
VPS52-218ENST00000482399 ANKS1BQ7Z6G8 1248 aa13.35□□□□□ -0.27
VPS52-218ENST00000482399 CCNJLQ8IV13 435 aa13.35□□□□□ -0.27
VPS52-218ENST00000482399 SLC26A7Q8TE54 656 aa13.35□□□□□ -0.27
VPS52-218ENST00000482399 BSNDQ8WZ55 320 aa13.35□□□□□ -0.27
VPS52-218ENST00000482399 ADGRA3Q8IWK6 1321 aa13.35□□□□□ -0.27
VPS52-218ENST00000482399 FAM155BO75949 473 aa13.34□□□□□ -0.27
VPS52-218ENST00000482399 USP1O94782 785 aa13.34□□□□□ -0.27
VPS52-218ENST00000482399 LINGO3P0C6S8 592 aa13.34□□□□□ -0.27
VPS52-218ENST00000482399 ETS2P15036 469 aa13.34□□□□□ -0.27
VPS52-218ENST00000482399 NOVP48745 357 aa13.34□□□□□ -0.27
VPS52-218ENST00000482399 CACNA2D1P54289 1103 aa13.34□□□□□ -0.27
VPS52-218ENST00000482399 POU5F2Q8N7G0 328 aa13.34□□□□□ -0.27
VPS52-218ENST00000482399 ZNF395Q9H8N7 513 aaPredicted RBP13.34□□□□□ -0.27
VPS52-218ENST00000482399 PIH1D1Q9NWS0 290 aaKnown RBP13.34□□□□□ -0.27
VPS52-218ENST00000482399 MCF2LO15068 1137 aa13.34□□□□□ -0.27
VPS52-218ENST00000482399 LIASO43766 372 aa13.34□□□□□ -0.27
VPS52-218ENST00000482399 OAS1P00973 400 aaKnown RBP13.34□□□□□ -0.27
VPS52-218ENST00000482399 RBP3P10745 1247 aa13.34□□□□□ -0.27
VPS52-218ENST00000482399 NCF2P19878 526 aaPredicted RBP13.34□□□□□ -0.27
VPS52-218ENST00000482399 GLRA2P23416 452 aa13.34□□□□□ -0.27
VPS52-218ENST00000482399 YARSP54577 528 aaKnown RBP13.34□□□□□ -0.27
VPS52-218ENST00000482399 EIF3EP60228 445 aaKnown RBP13.34□□□□□ -0.27
VPS52-218ENST00000482399 PPP6R3Q5H9R7 873 aaPredicted RBP13.34□□□□□ -0.27
VPS52-218ENST00000482399 MROH9Q5TGP6 573 aa13.34□□□□□ -0.27
VPS52-218ENST00000482399 WDR78Q5VTH9 848 aa13.34□□□□□ -0.27
VPS52-218ENST00000482399 TMEM161BQ8NDZ6 487 aa13.34□□□□□ -0.27
VPS52-218ENST00000482399 TRIM49D1C9J1S8 452 aa13.34□□□□□ -0.27
VPS52-218ENST00000482399 FCHO1O14526 889 aa13.34□□□□□ -0.27
VPS52-218ENST00000482399 ZWINTO95229 277 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms