RNA–Protein interactions for RNA: ENST00000481300.1

CBX3-207, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-207ENST00000481300 VPS4BO75351 444 aa4.67□□□□□ -1.66
CBX3-207ENST00000481300 PEX14O75381 377 aa4.67□□□□□ -1.66
CBX3-207ENST00000481300 DNAJB5O75953 348 aa4.67□□□□□ -1.66
CBX3-207ENST00000481300 PIK3CBP42338 1070 aa4.67□□□□□ -1.66
CBX3-207ENST00000481300 NANOS3P60323 173 aaKnown RBP4.67□□□□□ -1.66
CBX3-207ENST00000481300 SATB1Q01826 763 aa4.67□□□□□ -1.66
CBX3-207ENST00000481300 COL10A1Q03692 680 aa4.67□□□□□ -1.66
CBX3-207ENST00000481300 OCA2Q04671 838 aa4.67□□□□□ -1.66
CBX3-207ENST00000481300 CTBP1Q13363 440 aa4.67□□□□□ -1.66
CBX3-207ENST00000481300 BIRC2Q13490 618 aa4.67□□□□□ -1.66
CBX3-207ENST00000481300 PREPLQ4J6C6 727 aaPredicted RBP4.67□□□□□ -1.66
CBX3-207ENST00000481300 TAPT1Q6NXT6 567 aa4.67□□□□□ -1.66
CBX3-207ENST00000481300 SLC30A10Q6XR72 485 aa4.67□□□□□ -1.66
CBX3-207ENST00000481300 MRGPREQ86SM8 312 aa4.67□□□□□ -1.66
CBX3-207ENST00000481300 SLC15A4Q8N697 577 aa4.67□□□□□ -1.66
CBX3-207ENST00000481300 SAMD3Q8N6K7 520 aa4.67□□□□□ -1.66
CBX3-207ENST00000481300 DNAJC5GQ8N7S2 189 aa4.67□□□□□ -1.66
CBX3-207ENST00000481300 NSUN7Q8NE18 718 aaKnown RBP4.67□□□□□ -1.66
CBX3-207ENST00000481300 ACRBPQ8NEB7 543 aa4.67□□□□□ -1.66
CBX3-207ENST00000481300 MOGAT1Q96PD6 335 aa4.67□□□□□ -1.66
CBX3-207ENST00000481300 STRBPQ96SI9 672 aaKnown RBP4.67□□□□□ -1.66
CBX3-207ENST00000481300 PRRX2Q99811 253 aa4.67□□□□□ -1.66
CBX3-207ENST00000481300 MYD88Q99836 296 aa4.67□□□□□ -1.66
CBX3-207ENST00000481300 ELAC2Q9BQ52 826 aaKnown RBP4.67□□□□□ -1.66
CBX3-207ENST00000481300 UNKQ9C0B0 810 aaKnown RBP4.67□□□□□ -1.66
CBX3-207ENST00000481300 ZNF518BQ9C0D4 1074 aa4.67□□□□□ -1.66
CBX3-207ENST00000481300 NRDE2Q9H7Z3 1164 aa4.67□□□□□ -1.66
CBX3-207ENST00000481300 AKIP1Q9NQ31 210 aa4.67□□□□□ -1.66
CBX3-207ENST00000481300 STK32BQ9NY57 414 aa4.67□□□□□ -1.66
CBX3-207ENST00000481300 NEU2Q9Y3R4 380 aa4.67□□□□□ -1.66
CBX3-207ENST00000481300 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.66□□□□□ -1.66
CBX3-207ENST00000481300 FOXN1O15353 648 aa4.66□□□□□ -1.66
CBX3-207ENST00000481300 NCR1O76036 304 aa4.66□□□□□ -1.66
CBX3-207ENST00000481300 IL18RAPO95256 599 aa4.66□□□□□ -1.66
CBX3-207ENST00000481300 XRCC6P12956 609 aaKnown RBP eCLIP4.66□□□□□ -1.66
CBX3-207ENST00000481300 KCNA2P16389 499 aa4.66□□□□□ -1.66
CBX3-207ENST00000481300 SLC11A2P49281 568 aa4.66□□□□□ -1.66
CBX3-207ENST00000481300 PRIM2P49643 509 aa4.66□□□□□ -1.66
CBX3-207ENST00000481300 PTTG1IPP53801 180 aa4.66□□□□□ -1.66
CBX3-207ENST00000481300 UCP3P55916 312 aa4.66□□□□□ -1.66
CBX3-207ENST00000481300 C3orf38Q5JPI3 329 aa4.66□□□□□ -1.66
CBX3-207ENST00000481300 LAYNQ6UX15 382 aa4.66□□□□□ -1.66
CBX3-207ENST00000481300 RHOUQ7L0Q8 258 aa4.66□□□□□ -1.66
CBX3-207ENST00000481300 CLNKQ7Z7G1 428 aa4.66□□□□□ -1.66
CBX3-207ENST00000481300 SRLQ86TD4 932 aa4.66□□□□□ -1.66
CBX3-207ENST00000481300 SESTD1Q86VW0 696 aa4.66□□□□□ -1.66
CBX3-207ENST00000481300 FAM186BQ8IYM0 893 aa4.66□□□□□ -1.66
CBX3-207ENST00000481300 ZNF276Q8N554 614 aa4.66□□□□□ -1.66
CBX3-207ENST00000481300 CCDC33Q8N5R6 958 aa4.66□□□□□ -1.66
CBX3-207ENST00000481300 SLC25A43Q8WUT9 341 aaPredicted RBP4.66□□□□□ -1.66
CBX3-207ENST00000481300 NMD3Q96D46 503 aaKnown RBP4.66□□□□□ -1.66
CBX3-207ENST00000481300 RNF31Q96EP0 1072 aa4.66□□□□□ -1.66
CBX3-207ENST00000481300 CCDC138Q96M89 665 aa4.66□□□□□ -1.66
CBX3-207ENST00000481300 TTPALQ9BTX7 342 aa4.66□□□□□ -1.66
CBX3-207ENST00000481300 TEX101Q9BY14 249 aa4.66□□□□□ -1.66
CBX3-207ENST00000481300 DPH1Q9BZG8 443 aa4.66□□□□□ -1.66
CBX3-207ENST00000481300 TTYH3Q9C0H2 523 aa4.66□□□□□ -1.66
CBX3-207ENST00000481300 NLRC4Q9NPP4 1024 aa4.66□□□□□ -1.66
CBX3-207ENST00000481300 A1CFQ9NQ94 594 aaKnown RBP4.66□□□□□ -1.66
CBX3-207ENST00000481300 ZSCAN32Q9NX65 697 aa4.66□□□□□ -1.66
CBX3-207ENST00000481300 HSFX1Q9UBD0 423 aa4.66□□□□□ -1.66
CBX3-207ENST00000481300 XPR1Q9UBH6 696 aa4.66□□□□□ -1.66
CBX3-207ENST00000481300 KCNE5Q9UJ90 142 aa4.66□□□□□ -1.66
CBX3-207ENST00000481300 MYO15BQ96JP2 1530 aa4.66□□□□□ -1.66
CBX3-207ENST00000481300 TRIM43BA6NCK2 446 aa4.65□□□□□ -1.67
CBX3-207ENST00000481300 POM121BA6NF01 834 aa4.65□□□□□ -1.67
CBX3-207ENST00000481300 RAMP2O60895 175 aa4.65□□□□□ -1.67
CBX3-207ENST00000481300 PPFIA4O75335 1185 aa4.65□□□□□ -1.67
CBX3-207ENST00000481300 SOAT2O75908 522 aa4.65□□□□□ -1.67
CBX3-207ENST00000481300 NDUFA10O95299 355 aa4.65□□□□□ -1.67
CBX3-207ENST00000481300 CFIP05156 583 aa4.65□□□□□ -1.67
CBX3-207ENST00000481300 PARP1P09874 1014 aaKnown RBP4.65□□□□□ -1.67
CBX3-207ENST00000481300 LAG3P18627 525 aa4.65□□□□□ -1.67
CBX3-207ENST00000481300 CHRM3P20309 590 aa4.65□□□□□ -1.67
CBX3-207ENST00000481300 ITGALP20701 1170 aa4.65□□□□□ -1.67
CBX3-207ENST00000481300 TGM1P22735 817 aa4.65□□□□□ -1.67
CBX3-207ENST00000481300 NR4A1P22736 598 aa4.65□□□□□ -1.67
CBX3-207ENST00000481300 PTGS2P35354 604 aa4.65□□□□□ -1.67
CBX3-207ENST00000481300 CASP5P51878 434 aa4.65□□□□□ -1.67
CBX3-207ENST00000481300 RPS16P62249 146 aaKnown RBP4.65□□□□□ -1.67
CBX3-207ENST00000481300 CXADRP78310 365 aa4.65□□□□□ -1.67
CBX3-207ENST00000481300 DAG1Q14118 895 aa4.65□□□□□ -1.67
CBX3-207ENST00000481300 IQCB1Q15051 598 aa4.65□□□□□ -1.67
CBX3-207ENST00000481300 LONRF3Q496Y0 759 aa4.65□□□□□ -1.67
CBX3-207ENST00000481300 ARMC6Q6NXE6 501 aa4.65□□□□□ -1.67
CBX3-207ENST00000481300 PPP1R32Q7Z5V6 425 aa4.65□□□□□ -1.67
CBX3-207ENST00000481300 DPP9Q86TI2 863 aa4.65□□□□□ -1.67
CBX3-207ENST00000481300 ZNF575Q86XF7 245 aa4.65□□□□□ -1.67
CBX3-207ENST00000481300 SYNE4Q8N205 404 aa4.65□□□□□ -1.67
CBX3-207ENST00000481300 TMEM132CQ8N3T6 1108 aa4.65□□□□□ -1.67
CBX3-207ENST00000481300 PSD4Q8NDX1 1056 aa4.65□□□□□ -1.67
CBX3-207ENST00000481300 HAS1Q92839 578 aa4.65□□□□□ -1.67
CBX3-207ENST00000481300 GJA10Q969M2 543 aa4.65□□□□□ -1.67
CBX3-207ENST00000481300 TRIM43Q96BQ3 446 aaPredicted RBP4.65□□□□□ -1.67
CBX3-207ENST00000481300 MSLNLQ96KJ4 702 aa4.65□□□□□ -1.67
CBX3-207ENST00000481300 SLC46A1Q96NT5 459 aa4.65□□□□□ -1.67
CBX3-207ENST00000481300 RPS6KC1Q96S38 1066 aa4.65□□□□□ -1.67
CBX3-207ENST00000481300 SPATA5L1Q9BVQ7 753 aa4.65□□□□□ -1.67
CBX3-207ENST00000481300 ZNF768Q9H5H4 540 aaKnown RBP4.65□□□□□ -1.67
CBX3-207ENST00000481300 SMURF2Q9HAU4 748 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms