RNA–Protein interactions for RNA: ENST00000481231.5

SMARCE1-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 695 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-210ENST00000481231 SEZ6Q53EL9 994 aa10.26□□□□□ -0.77
SMARCE1-210ENST00000481231 TRIM61Q5EBN2 209 aa10.26□□□□□ -0.77
SMARCE1-210ENST00000481231 TMEM196Q5HYL7 178 aa10.26□□□□□ -0.77
SMARCE1-210ENST00000481231 KRT79Q5XKE5 535 aa10.26□□□□□ -0.77
SMARCE1-210ENST00000481231 NAIF1Q69YI7 327 aaPredicted RBP10.26□□□□□ -0.77
SMARCE1-210ENST00000481231 HAUS6Q7Z4H7 955 aa10.26□□□□□ -0.77
SMARCE1-210ENST00000481231 RAB44Q7Z6P3 723 aaPredicted RBP10.26□□□□□ -0.77
SMARCE1-210ENST00000481231 FAM184AQ8NB25 1140 aa10.26□□□□□ -0.77
SMARCE1-210ENST00000481231 TMEM161BQ8NDZ6 487 aa10.26□□□□□ -0.77
SMARCE1-210ENST00000481231 APPL2Q8NEU8 664 aa10.26□□□□□ -0.77
SMARCE1-210ENST00000481231 SPIRE2Q8WWL2 714 aa10.26□□□□□ -0.77
SMARCE1-210ENST00000481231 PIGKQ92643 395 aa10.26□□□□□ -0.77
SMARCE1-210ENST00000481231 DDX12PQ92771 950 aa10.26□□□□□ -0.77
SMARCE1-210ENST00000481231 C17orf75Q9HAS0 396 aa10.26□□□□□ -0.77
SMARCE1-210ENST00000481231 FSCN3Q9NQT6 498 aa10.26□□□□□ -0.77
SMARCE1-210ENST00000481231 PCDHB8Q9UN66 801 aa10.26□□□□□ -0.77
SMARCE1-210ENST00000481231 H0Y626 953 aa10.25□□□□□ -0.77
SMARCE1-210ENST00000481231 LAD1O00515 517 aa10.25□□□□□ -0.77
SMARCE1-210ENST00000481231 DPYSL4O14531 572 aa10.25□□□□□ -0.77
SMARCE1-210ENST00000481231 TRIM16O95361 564 aa10.25□□□□□ -0.77
SMARCE1-210ENST00000481231 VNN2O95498 520 aa10.25□□□□□ -0.77
SMARCE1-210ENST00000481231 APBB3O95704 486 aa10.25□□□□□ -0.77
SMARCE1-210ENST00000481231 CXCL8P10145 99 aa10.25□□□□□ -0.77
SMARCE1-210ENST00000481231 MAPTP10636 758 aaKnown RBP10.25□□□□□ -0.77
SMARCE1-210ENST00000481231 CPB1P15086 417 aa10.25□□□□□ -0.77
SMARCE1-210ENST00000481231 ENGP17813 658 aa10.25□□□□□ -0.77
SMARCE1-210ENST00000481231 GUCY2CP25092 1073 aa10.25□□□□□ -0.77
SMARCE1-210ENST00000481231 DHPSP49366 369 aaPredicted RBP10.25□□□□□ -0.77
SMARCE1-210ENST00000481231 DGKEP52429 567 aa10.25□□□□□ -0.77
SMARCE1-210ENST00000481231 MCL1Q07820 350 aa10.25□□□□□ -0.77
SMARCE1-210ENST00000481231 STRN3Q13033 797 aa10.25□□□□□ -0.77
SMARCE1-210ENST00000481231 SEMA3BQ13214 749 aa10.25□□□□□ -0.77
SMARCE1-210ENST00000481231 ZRSR1Q15695 479 aaKnown RBP10.25□□□□□ -0.77
SMARCE1-210ENST00000481231 ITPRIPL2Q3MIP1 535 aa10.25□□□□□ -0.77
SMARCE1-210ENST00000481231 ARHGAP29Q52LW3 1261 aa10.25□□□□□ -0.77
SMARCE1-210ENST00000481231 DTHD1Q6ZMT9 781 aa10.25□□□□□ -0.77
SMARCE1-210ENST00000481231 RNF19BQ6ZMZ0 732 aa10.25□□□□□ -0.77
SMARCE1-210ENST00000481231 ARMCX6Q7L4S7 300 aa10.25□□□□□ -0.77
SMARCE1-210ENST00000481231 TMC8Q8IU68 726 aa10.25□□□□□ -0.77
SMARCE1-210ENST00000481231 BEST2Q8NFU1 509 aa10.25□□□□□ -0.77
SMARCE1-210ENST00000481231 RPLP0P6Q8NHW5 317 aa10.25□□□□□ -0.77
SMARCE1-210ENST00000481231 NTPCRQ9BSD7 190 aaKnown RBP10.25□□□□□ -0.77
SMARCE1-210ENST00000481231 TIPINQ9BVW5 301 aa10.25□□□□□ -0.77
SMARCE1-210ENST00000481231 LRRC3Q9BY71 257 aa10.25□□□□□ -0.77
SMARCE1-210ENST00000481231 SMG9Q9H0W8 520 aaKnown RBP10.25□□□□□ -0.77
SMARCE1-210ENST00000481231 FBRSL1Q9HCM7 1045 aaKnown RBP10.25□□□□□ -0.77
SMARCE1-210ENST00000481231 MBD1Q9UIS9 605 aaPredicted RBP10.25□□□□□ -0.77
SMARCE1-210ENST00000481231 MAFFQ9ULX9 164 aa10.25□□□□□ -0.77
SMARCE1-210ENST00000481231 YIPF1Q9Y548 306 aa10.25□□□□□ -0.77
SMARCE1-210ENST00000481231 ATXN2Q99700 1313 aaKnown RBP10.25□□□□□ -0.77
SMARCE1-210ENST00000481231 ASCC3Q8N3C0 2202 aaKnown RBP10.25□□□□□ -0.77
SMARCE1-210ENST00000481231 TRIP11Q15643 1979 aa10.25□□□□□ -0.77
SMARCE1-210ENST00000481231 APC2O95996 2303 aa10.24□□□□□ -0.77
SMARCE1-210ENST00000481231 OTOL1A6NHN0 477 aaPredicted RBP10.24□□□□□ -0.77
SMARCE1-210ENST00000481231 M0QZQ0 153 aa10.24□□□□□ -0.77
SMARCE1-210ENST00000481231 EIF5BO60841 1220 aaKnown RBP10.24□□□□□ -0.77
SMARCE1-210ENST00000481231 OAZ2O95190 189 aa10.24□□□□□ -0.77
SMARCE1-210ENST00000481231 CLTAP09496 248 aa10.24□□□□□ -0.77
SMARCE1-210ENST00000481231 PLS3P13797 630 aa10.24□□□□□ -0.77
SMARCE1-210ENST00000481231 MARCKSP29966 332 aaPredicted RBP10.24□□□□□ -0.77
SMARCE1-210ENST00000481231 PRPHP41219 470 aa10.24□□□□□ -0.77
SMARCE1-210ENST00000481231 SMTNP53814 917 aa10.24□□□□□ -0.77
SMARCE1-210ENST00000481231 SPAG1Q07617 926 aa10.24□□□□□ -0.77
SMARCE1-210ENST00000481231 LMAN2Q12907 356 aa10.24□□□□□ -0.77
SMARCE1-210ENST00000481231 DMC1Q14565 340 aa10.24□□□□□ -0.77
SMARCE1-210ENST00000481231 TRIM68Q6AZZ1 485 aa10.24□□□□□ -0.77
SMARCE1-210ENST00000481231 ZPBP2Q6X784 338 aa10.24□□□□□ -0.77
SMARCE1-210ENST00000481231 LURAP1LQ8IV03 231 aa10.24□□□□□ -0.77
SMARCE1-210ENST00000481231 PNPLA1Q8N8W4 532 aa10.24□□□□□ -0.77
SMARCE1-210ENST00000481231 LEMD2Q8NC56 503 aa10.24□□□□□ -0.77
SMARCE1-210ENST00000481231 ZSCAN31Q96LW9 406 aaPredicted RBP10.24□□□□□ -0.77
SMARCE1-210ENST00000481231 PNMA5Q96PV4 448 aa10.24□□□□□ -0.77
SMARCE1-210ENST00000481231 NUSAP1Q9BXS6 441 aaKnown RBP10.24□□□□□ -0.77
SMARCE1-210ENST00000481231 GPR88Q9GZN0 384 aa10.24□□□□□ -0.77
SMARCE1-210ENST00000481231 HAPLN2Q9GZV7 340 aa10.24□□□□□ -0.77
SMARCE1-210ENST00000481231 CRISPLD1Q9H336 500 aa10.24□□□□□ -0.77
SMARCE1-210ENST00000481231 SCUBE2Q9NQ36 999 aa10.24□□□□□ -0.77
SMARCE1-210ENST00000481231 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.24□□□□□ -0.77
SMARCE1-210ENST00000481231 PPP4R2Q9NY27 417 aa10.24□□□□□ -0.77
SMARCE1-210ENST00000481231 EBF1Q9UH73 591 aa10.24□□□□□ -0.77
SMARCE1-210ENST00000481231 EVLQ9UI08 416 aaPredicted RBP10.24□□□□□ -0.77
SMARCE1-210ENST00000481231 TIMM13Q9Y5L4 95 aaPredicted RBP10.24□□□□□ -0.77
SMARCE1-210ENST00000481231 HECTD1Q9ULT8 2610 aa10.23□□□□□ -0.77
SMARCE1-210ENST00000481231 ZNF462Q96JM2 2506 aa10.23□□□□□ -0.77
SMARCE1-210ENST00000481231 NPHP3-ACAD11A0A0J9YXS1 232 aa10.23□□□□□ -0.77
SMARCE1-210ENST00000481231 TTC26A0AVF1 554 aa10.23□□□□□ -0.77
SMARCE1-210ENST00000481231 TRDMT1O14717 391 aaKnown RBP10.23□□□□□ -0.77
SMARCE1-210ENST00000481231 CLDN3O15551 220 aa10.23□□□□□ -0.77
SMARCE1-210ENST00000481231 OR4Q2P0C623 313 aa10.23□□□□□ -0.77
SMARCE1-210ENST00000481231 LRPAP1P30533 357 aa10.23□□□□□ -0.77
SMARCE1-210ENST00000481231 RDXP35241 583 aaKnown RBP10.23□□□□□ -0.77
SMARCE1-210ENST00000481231 AARSP49588 968 aaKnown RBP eCLIP10.23□□□□□ -0.77
SMARCE1-210ENST00000481231 GUCY2FP51841 1108 aa10.23□□□□□ -0.77
SMARCE1-210ENST00000481231 SLC12A3P55017 1021 aa10.23□□□□□ -0.77
SMARCE1-210ENST00000481231 YWHAHQ04917 246 aaPredicted RBP10.23□□□□□ -0.77
SMARCE1-210ENST00000481231 DUSP4Q13115 394 aa10.23□□□□□ -0.77
SMARCE1-210ENST00000481231 ZNF423Q2M1K9 1284 aa10.23□□□□□ -0.77
SMARCE1-210ENST00000481231 HYIQ5T013 277 aa10.23□□□□□ -0.77
SMARCE1-210ENST00000481231 SYT13Q7L8C5 426 aa10.23□□□□□ -0.77
SMARCE1-210ENST00000481231 OR2I1PQ8NGU4 316 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms