RNA–Protein interactions for RNA: ENST00000480744.2

LIMS3-203, Transcript of LIM zinc finger domain containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS3, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-203ENST00000480744 KPNA1P52294 538 aaPredicted RBP16.43■□□□□ 0.22
LIMS3-203ENST00000480744 BFSP1Q12934 665 aa16.43■□□□□ 0.22
LIMS3-203ENST00000480744 FZD5Q13467 585 aa16.43■□□□□ 0.22
LIMS3-203ENST00000480744 ALCAMQ13740 583 aa16.43■□□□□ 0.22
LIMS3-203ENST00000480744 LRRTM3Q86VH5 581 aa16.43■□□□□ 0.22
LIMS3-203ENST00000480744 CCDC65Q8IXS2 484 aa16.43■□□□□ 0.22
LIMS3-203ENST00000480744 DCP1BQ8IZD4 617 aaKnown RBP16.43■□□□□ 0.22
LIMS3-203ENST00000480744 DCLK2Q8N568 766 aa16.43■□□□□ 0.22
LIMS3-203ENST00000480744 TTC8Q8TAM2 541 aa16.43■□□□□ 0.22
LIMS3-203ENST00000480744 SPPL2BQ8TCT7 592 aa16.43■□□□□ 0.22
LIMS3-203ENST00000480744 C2orf15Q8WU43 125 aaKnown RBP16.43■□□□□ 0.22
LIMS3-203ENST00000480744 CACTINQ8WUQ7 758 aaKnown RBP16.43■□□□□ 0.22
LIMS3-203ENST00000480744 RUBCNQ92622 972 aa16.43■□□□□ 0.22
LIMS3-203ENST00000480744 BORCS6Q96GS4 357 aa16.43■□□□□ 0.22
LIMS3-203ENST00000480744 CBWD1Q9BRT8 395 aa16.43■□□□□ 0.22
LIMS3-203ENST00000480744 MKNK1Q9BUB5 465 aa16.43■□□□□ 0.22
LIMS3-203ENST00000480744 LMAN1LQ9HAT1 526 aa16.43■□□□□ 0.22
LIMS3-203ENST00000480744 PCDHGA2Q9Y5H1 932 aa16.43■□□□□ 0.22
LIMS3-203ENST00000480744 OTOGLQ3ZCN5 2332 aa16.43■□□□□ 0.22
LIMS3-203ENST00000480744 FRMD3A2A2Y4 597 aa16.42■□□□□ 0.22
LIMS3-203ENST00000480744 CHADO15335 359 aa16.42■□□□□ 0.22
LIMS3-203ENST00000480744 KRT19P08727 400 aa16.42■□□□□ 0.22
LIMS3-203ENST00000480744 HAPLN1P10915 354 aaPredicted RBP16.42■□□□□ 0.22
LIMS3-203ENST00000480744 CDC25CP30307 473 aa16.42■□□□□ 0.22
LIMS3-203ENST00000480744 SOX9P48436 509 aa16.42■□□□□ 0.22
LIMS3-203ENST00000480744 NASPP49321 788 aaPredicted RBP16.42■□□□□ 0.22
LIMS3-203ENST00000480744 TSPY1Q01534 308 aa16.42■□□□□ 0.22
LIMS3-203ENST00000480744 SMARCB1Q12824 385 aa16.42■□□□□ 0.22
LIMS3-203ENST00000480744 C1orf127Q8N9H9 656 aa16.42■□□□□ 0.22
LIMS3-203ENST00000480744 ZFYVE19Q96K21 471 aa16.42■□□□□ 0.22
LIMS3-203ENST00000480744 CHRDQ9H2X0 955 aa16.42■□□□□ 0.22
LIMS3-203ENST00000480744 PRMT8Q9NR22 394 aaPredicted RBP16.42■□□□□ 0.22
LIMS3-203ENST00000480744 ZSCAN32Q9NX65 697 aa16.42■□□□□ 0.22
LIMS3-203ENST00000480744 NCDNQ9UBB6 729 aa16.42■□□□□ 0.22
LIMS3-203ENST00000480744 TFIP11Q9UBB9 837 aaKnown RBP16.42■□□□□ 0.22
LIMS3-203ENST00000480744 PCDHB5Q9Y5E4 795 aa16.42■□□□□ 0.22
LIMS3-203ENST00000480744 MORC2Q9Y6X9 1032 aaPredicted RBP16.42■□□□□ 0.22
LIMS3-203ENST00000480744 ARNTLO00327 626 aa16.41■□□□□ 0.22
LIMS3-203ENST00000480744 SPTLC2O15270 562 aa16.41■□□□□ 0.22
LIMS3-203ENST00000480744 EXTL3O43909 919 aa16.41■□□□□ 0.22
LIMS3-203ENST00000480744 HUS1O60921 280 aa16.41■□□□□ 0.22
LIMS3-203ENST00000480744 PRAMEF12O95522 483 aa16.41■□□□□ 0.22
LIMS3-203ENST00000480744 TMEM191BP0C7N4 346 aa16.41■□□□□ 0.22
LIMS3-203ENST00000480744 FCHO2Q0JRZ9 810 aa16.41■□□□□ 0.22
LIMS3-203ENST00000480744 FOXD4L5Q5VV16 416 aaPredicted RBP16.41■□□□□ 0.22
LIMS3-203ENST00000480744 STXBP4Q6ZWJ1 553 aa16.41■□□□□ 0.22
LIMS3-203ENST00000480744 ZNF687Q8N1G0 1237 aa16.41■□□□□ 0.22
LIMS3-203ENST00000480744 PDCL2Q8N4E4 241 aa16.41■□□□□ 0.22
LIMS3-203ENST00000480744 CSGALNACT2Q8N6G5 542 aa16.41■□□□□ 0.22
LIMS3-203ENST00000480744 SUMF1Q8NBK3 374 aa16.41■□□□□ 0.22
LIMS3-203ENST00000480744 LINC00301Q8NCQ3 95 aa16.41■□□□□ 0.22
LIMS3-203ENST00000480744 FOXD4L4Q8WXT5 416 aaPredicted RBP16.41■□□□□ 0.22
LIMS3-203ENST00000480744 HPS3Q969F9 1004 aa16.41■□□□□ 0.22
LIMS3-203ENST00000480744 ZNF396Q96N95 335 aaPredicted RBP16.41■□□□□ 0.22
LIMS3-203ENST00000480744 LRRC3BQ96PB8 259 aa16.41■□□□□ 0.22
LIMS3-203ENST00000480744 PI4K2AQ9BTU6 479 aa16.41■□□□□ 0.22
LIMS3-203ENST00000480744 SMG9Q9H0W8 520 aaKnown RBP16.41■□□□□ 0.22
LIMS3-203ENST00000480744 TASP1Q9H6P5 420 aa16.41■□□□□ 0.22
LIMS3-203ENST00000480744 TMEM206Q9H813 350 aa16.41■□□□□ 0.22
LIMS3-203ENST00000480744 IL21Q9HBE4 155 aa16.41■□□□□ 0.22
LIMS3-203ENST00000480744 PDE11AQ9HCR9 933 aa16.41■□□□□ 0.22
LIMS3-203ENST00000480744 TMLHEQ9NVH6 421 aa16.41■□□□□ 0.22
LIMS3-203ENST00000480744 L1RE1Q9UN81 338 aa16.41■□□□□ 0.22
LIMS3-203ENST00000480744 PRPF40AO75400 957 aaKnown RBP16.4■□□□□ 0.22
LIMS3-203ENST00000480744 ACAT1P24752 427 aaKnown RBP16.4■□□□□ 0.22
LIMS3-203ENST00000480744 GPR15P49685 360 aa16.4■□□□□ 0.22
LIMS3-203ENST00000480744 ARHGAP29Q52LW3 1261 aa16.4■□□□□ 0.22
LIMS3-203ENST00000480744 LMBRD2Q68DH5 695 aaPredicted RBP16.4■□□□□ 0.22
LIMS3-203ENST00000480744 SCARA3Q6AZY7 606 aa16.4■□□□□ 0.22
LIMS3-203ENST00000480744 GPD1LQ8N335 351 aa16.4■□□□□ 0.22
LIMS3-203ENST00000480744 STKLD1Q8NE28 680 aa16.4■□□□□ 0.22
LIMS3-203ENST00000480744 GLIS3Q8NEA6 775 aa16.4■□□□□ 0.22
LIMS3-203ENST00000480744 DHX58Q96C10 678 aa16.4■□□□□ 0.22
LIMS3-203ENST00000480744 MTMR12Q9C0I1 747 aa16.4■□□□□ 0.22
LIMS3-203ENST00000480744 LRRC27Q9C0I9 530 aa16.4■□□□□ 0.22
LIMS3-203ENST00000480744 TNMDQ9H2S6 317 aa16.4■□□□□ 0.22
LIMS3-203ENST00000480744 C8orf33Q9H7E9 229 aaPredicted RBP16.4■□□□□ 0.22
LIMS3-203ENST00000480744 DDX43Q9NXZ2 648 aaKnown RBP16.4■□□□□ 0.22
LIMS3-203ENST00000480744 GTSE1Q9NYZ3 720 aa16.4■□□□□ 0.22
LIMS3-203ENST00000480744 ITGA11Q9UKX5 1188 aa16.4■□□□□ 0.22
LIMS3-203ENST00000480744 MAGED2Q9UNF1 606 aaPredicted RBP16.4■□□□□ 0.22
LIMS3-203ENST00000480744 R3HCC1Q9Y3T6 440 aaKnown RBP16.4■□□□□ 0.22
LIMS3-203ENST00000480744 SNX9Q9Y5X1 595 aa16.4■□□□□ 0.22
LIMS3-203ENST00000480744 SPECC1L-ADORA2AF8WAN1 911 aa16.39■□□□□ 0.21
LIMS3-203ENST00000480744 CHRNB1P11230 501 aa16.39■□□□□ 0.21
LIMS3-203ENST00000480744 ASIC1P78348 528 aa16.39■□□□□ 0.21
LIMS3-203ENST00000480744 RBP5P82980 135 aa16.39■□□□□ 0.21
LIMS3-203ENST00000480744 MYL7Q01449 175 aa16.39■□□□□ 0.21
LIMS3-203ENST00000480744 LRRC32Q14392 662 aa16.39■□□□□ 0.21
LIMS3-203ENST00000480744 PPP2R5DQ14738 602 aa16.39■□□□□ 0.21
LIMS3-203ENST00000480744 NFE2Q16621 373 aaPredicted RBP16.39■□□□□ 0.21
LIMS3-203ENST00000480744 FOXD4L6Q3SYB3 417 aaPredicted RBP16.39■□□□□ 0.21
LIMS3-203ENST00000480744 SDHAF4Q5VUM1 108 aa16.39■□□□□ 0.21
LIMS3-203ENST00000480744 FOXD4L3Q6VB84 417 aaPredicted RBP16.39■□□□□ 0.21
LIMS3-203ENST00000480744 LRRC52Q8N7C0 313 aa16.39■□□□□ 0.21
LIMS3-203ENST00000480744 ZBTB44Q8NCP5 570 aa16.39■□□□□ 0.21
LIMS3-203ENST00000480744 BPIFB1Q8TDL5 484 aa16.39■□□□□ 0.21
LIMS3-203ENST00000480744 MSANTD3Q96H12 275 aa16.39■□□□□ 0.21
LIMS3-203ENST00000480744 ANKRD36BP1Q96IX9 119 aa16.39■□□□□ 0.21
LIMS3-203ENST00000480744 IER2Q9BTL4 223 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms