RNA–Protein interactions for RNA: ENST00000480562.3

ABCF3-214, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 1 (best)

Gene ABCF3, Length 1,182 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-214ENST00000480562 HAPLN1P10915 354 aaPredicted RBP20.31■□□□□ 0.84
ABCF3-214ENST00000480562 CHRNB1P11230 501 aa20.31■□□□□ 0.84
ABCF3-214ENST00000480562 TDGF1P13385 188 aa20.31■□□□□ 0.84
ABCF3-214ENST00000480562 POLR2BP30876 1174 aaKnown RBP20.31■□□□□ 0.84
ABCF3-214ENST00000480562 STAT6P42226 847 aa20.31■□□□□ 0.84
ABCF3-214ENST00000480562 TAF12Q16514 161 aa20.31■□□□□ 0.84
ABCF3-214ENST00000480562 CCDC73Q6ZRK6 1079 aa20.31■□□□□ 0.84
ABCF3-214ENST00000480562 NT5DC4Q86YG4 428 aa20.31■□□□□ 0.84
ABCF3-214ENST00000480562 BRSK2Q8IWQ3 736 aa20.31■□□□□ 0.84
ABCF3-214ENST00000480562 SYCP3Q8IZU3 236 aa20.31■□□□□ 0.84
ABCF3-214ENST00000480562 NOC3LQ8WTT2 800 aaKnown RBP20.31■□□□□ 0.84
ABCF3-214ENST00000480562 ZNF560Q96MR9 790 aa20.31■□□□□ 0.84
ABCF3-214ENST00000480562 SMG9Q9H0W8 520 aaKnown RBP20.31■□□□□ 0.84
ABCF3-214ENST00000480562 TASP1Q9H6P5 420 aa20.31■□□□□ 0.84
ABCF3-214ENST00000480562 TMLHEQ9NVH6 421 aa20.31■□□□□ 0.84
ABCF3-214ENST00000480562 GTSE1Q9NYZ3 720 aa20.31■□□□□ 0.84
ABCF3-214ENST00000480562 AGAP1Q9UPQ3 857 aa20.31■□□□□ 0.84
ABCF3-214ENST00000480562 SMG5Q9UPR3 1016 aaKnown RBP20.31■□□□□ 0.84
ABCF3-214ENST00000480562 MTMR6Q9Y217 621 aa20.31■□□□□ 0.84
ABCF3-214ENST00000480562 ITGB3P05106 788 aa20.3■□□□□ 0.84
ABCF3-214ENST00000480562 MLLT6P55198 1093 aaPredicted RBP20.3■□□□□ 0.84
ABCF3-214ENST00000480562 SATB1Q01826 763 aa20.3■□□□□ 0.84
ABCF3-214ENST00000480562 GAS6Q14393 721 aa20.3■□□□□ 0.84
ABCF3-214ENST00000480562 SLC39A14Q15043 492 aa20.3■□□□□ 0.84
ABCF3-214ENST00000480562 SPPL2BQ8TCT7 592 aa20.3■□□□□ 0.84
ABCF3-214ENST00000480562 C2orf15Q8WU43 125 aaKnown RBP20.3■□□□□ 0.84
ABCF3-214ENST00000480562 GCNAQ96QF7 691 aa20.3■□□□□ 0.84
ABCF3-214ENST00000480562 EPC1Q9H2F5 836 aa20.3■□□□□ 0.84
ABCF3-214ENST00000480562 C8orf33Q9H7E9 229 aaPredicted RBP20.3■□□□□ 0.84
ABCF3-214ENST00000480562 OLFML3Q9NRN5 406 aa20.3■□□□□ 0.84
ABCF3-214ENST00000480562 RBM12Q9NTZ6 932 aaKnown RBP20.3■□□□□ 0.84
ABCF3-214ENST00000480562 PANK4Q9NVE7 773 aa20.3■□□□□ 0.84
ABCF3-214ENST00000480562 RBAKQ9NYW8 714 aaPredicted RBP20.3■□□□□ 0.84
ABCF3-214ENST00000480562 PCDHB13Q9Y5F0 798 aa20.3■□□□□ 0.84
ABCF3-214ENST00000480562 CEP250Q9BV73 2442 aa20.29■□□□□ 0.84
ABCF3-214ENST00000480562 SPECC1L-ADORA2AF8WAN1 911 aa20.29■□□□□ 0.84
ABCF3-214ENST00000480562 PRPF6O94906 941 aaKnown RBP20.29■□□□□ 0.84
ABCF3-214ENST00000480562 CDC25CP30307 473 aa20.29■□□□□ 0.84
ABCF3-214ENST00000480562 GPR15P49685 360 aa20.29■□□□□ 0.84
ABCF3-214ENST00000480562 ARHGAP29Q52LW3 1261 aa20.29■□□□□ 0.84
ABCF3-214ENST00000480562 WDR44Q5JSH3 913 aa20.29■□□□□ 0.84
ABCF3-214ENST00000480562 TXNDC11Q6PKC3 985 aa20.29■□□□□ 0.84
ABCF3-214ENST00000480562 MAMSTRQ6ZN01 415 aa20.29■□□□□ 0.84
ABCF3-214ENST00000480562 DCP1BQ8IZD4 617 aaKnown RBP20.29■□□□□ 0.84
ABCF3-214ENST00000480562 PDILTQ8N807 584 aa20.29■□□□□ 0.84
ABCF3-214ENST00000480562 C1orf127Q8N9H9 656 aa20.29■□□□□ 0.84
ABCF3-214ENST00000480562 STKLD1Q8NE28 680 aa20.29■□□□□ 0.84
ABCF3-214ENST00000480562 CBWD1Q9BRT8 395 aa20.29■□□□□ 0.84
ABCF3-214ENST00000480562 IER2Q9BTL4 223 aa20.29■□□□□ 0.84
ABCF3-214ENST00000480562 SLC46A2Q9BY10 475 aa20.29■□□□□ 0.84
ABCF3-214ENST00000480562 FAM126AQ9BYI3 521 aaPredicted RBP20.29■□□□□ 0.84
ABCF3-214ENST00000480562 PCIF1Q9H4Z3 704 aa20.29■□□□□ 0.84
ABCF3-214ENST00000480562 PCDHB5Q9Y5E4 795 aa20.29■□□□□ 0.84
ABCF3-214ENST00000480562 CACNA1AO00555 2505 aa20.29■□□□□ 0.84
ABCF3-214ENST00000480562 FRMD3A2A2Y4 597 aa20.28■□□□□ 0.84
ABCF3-214ENST00000480562 MYBPHLA2RUH7 354 aa20.28■□□□□ 0.84
ABCF3-214ENST00000480562 GARTP22102 1010 aa20.28■□□□□ 0.84
ABCF3-214ENST00000480562 CTHP32929 405 aa20.28■□□□□ 0.84
ABCF3-214ENST00000480562 PNPLA4P41247 253 aa20.28■□□□□ 0.84
ABCF3-214ENST00000480562 CCR3P51677 355 aa20.28■□□□□ 0.84
ABCF3-214ENST00000480562 TSPY1Q01534 308 aa20.28■□□□□ 0.84
ABCF3-214ENST00000480562 TNK2Q07912 1038 aa20.28■□□□□ 0.84
ABCF3-214ENST00000480562 SMARCB1Q12824 385 aa20.28■□□□□ 0.84
ABCF3-214ENST00000480562 BFSP1Q12934 665 aa20.28■□□□□ 0.84
ABCF3-214ENST00000480562 SDHAF4Q5VUM1 108 aa20.28■□□□□ 0.84
ABCF3-214ENST00000480562 PDCL2Q8N4E4 241 aa20.28■□□□□ 0.84
ABCF3-214ENST00000480562 BPIFB1Q8TDL5 484 aa20.28■□□□□ 0.84
ABCF3-214ENST00000480562 MSANTD3Q96H12 275 aa20.28■□□□□ 0.84
ABCF3-214ENST00000480562 PI4K2AQ9BTU6 479 aa20.28■□□□□ 0.84
ABCF3-214ENST00000480562 OBP2AQ9NY56 170 aa20.28■□□□□ 0.84
ABCF3-214ENST00000480562 L1RE1Q9UN81 338 aa20.28■□□□□ 0.84
ABCF3-214ENST00000480562 NUP210Q8TEM1 1887 aaPredicted RBP20.28■□□□□ 0.84
ABCF3-214ENST00000480562 EXTL3O43909 919 aa20.27■□□□□ 0.84
ABCF3-214ENST00000480562 PRPF40AO75400 957 aaKnown RBP20.27■□□□□ 0.84
ABCF3-214ENST00000480562 LDHAP00338 332 aaKnown RBP20.27■□□□□ 0.84
ABCF3-214ENST00000480562 HMGA1P17096 107 aaKnown RBP20.27■□□□□ 0.84
ABCF3-214ENST00000480562 ACAT1P24752 427 aaKnown RBP20.27■□□□□ 0.84
ABCF3-214ENST00000480562 CXCL12P48061 93 aa20.27■□□□□ 0.84
ABCF3-214ENST00000480562 ALCAMQ13740 583 aa20.27■□□□□ 0.84
ABCF3-214ENST00000480562 LRRC32Q14392 662 aa20.27■□□□□ 0.84
ABCF3-214ENST00000480562 PPP2R5DQ14738 602 aa20.27■□□□□ 0.84
ABCF3-214ENST00000480562 Q6ZS52 159 aa20.27■□□□□ 0.84
ABCF3-214ENST00000480562 TMEM150AQ86TG1 271 aa20.27■□□□□ 0.84
ABCF3-214ENST00000480562 RALGPS2Q86X27 583 aaPredicted RBP20.27■□□□□ 0.84
ABCF3-214ENST00000480562 CSGALNACT2Q8N6G5 542 aa20.27■□□□□ 0.84
ABCF3-214ENST00000480562 CACTINQ8WUQ7 758 aaKnown RBP20.27■□□□□ 0.84
ABCF3-214ENST00000480562 INTS4Q96HW7 963 aaKnown RBP20.27■□□□□ 0.84
ABCF3-214ENST00000480562 PDE11AQ9HCR9 933 aa20.27■□□□□ 0.84
ABCF3-214ENST00000480562 DDX43Q9NXZ2 648 aaKnown RBP20.27■□□□□ 0.84
ABCF3-214ENST00000480562 HUS1O60921 280 aa20.26■□□□□ 0.83
ABCF3-214ENST00000480562 KRT19P08727 400 aa20.26■□□□□ 0.83
ABCF3-214ENST00000480562 WEE1P30291 646 aa20.26■□□□□ 0.83
ABCF3-214ENST00000480562 NRLP54845 237 aa20.26■□□□□ 0.83
ABCF3-214ENST00000480562 NLRP12P59046 1061 aa20.26■□□□□ 0.83
ABCF3-214ENST00000480562 PON2Q15165 354 aa20.26■□□□□ 0.83
ABCF3-214ENST00000480562 LPAL2Q16609 132 aa20.26■□□□□ 0.83
ABCF3-214ENST00000480562 CCDC142Q17RM4 750 aa20.26■□□□□ 0.83
ABCF3-214ENST00000480562 LMBRD2Q68DH5 695 aaPredicted RBP20.26■□□□□ 0.83
ABCF3-214ENST00000480562 C1orf228Q6PIY5 440 aa20.26■□□□□ 0.83
ABCF3-214ENST00000480562 DGLUCYQ7Z3D6 616 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms