RNA–Protein interactions for RNA: ENST00000480525.5

HDAC6-223, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-223ENST00000480525 TYRO3Q06418 890 aa5.44□□□□□ -1.54
HDAC6-223ENST00000480525 KCNH2Q12809 1159 aa5.44□□□□□ -1.54
HDAC6-223ENST00000480525 CAMK4Q16566 473 aa5.44□□□□□ -1.54
HDAC6-223ENST00000480525 WDR72Q3MJ13 1102 aa5.44□□□□□ -1.54
HDAC6-223ENST00000480525 CTXN3Q4LDR2 81 aa5.44□□□□□ -1.54
HDAC6-223ENST00000480525 WDR44Q5JSH3 913 aa5.44□□□□□ -1.54
HDAC6-223ENST00000480525 TJAP1Q5JTD0 557 aa5.44□□□□□ -1.54
HDAC6-223ENST00000480525 LIN9Q5TKA1 542 aa5.44□□□□□ -1.54
HDAC6-223ENST00000480525 PLPP4Q5VZY2 271 aa5.44□□□□□ -1.54
HDAC6-223ENST00000480525 SYCE2Q6PIF2 218 aa5.44□□□□□ -1.54
HDAC6-223ENST00000480525 ADGRD2Q7Z7M1 963 aa5.44□□□□□ -1.54
HDAC6-223ENST00000480525 ITIH5Q86UX2 942 aa5.44□□□□□ -1.54
HDAC6-223ENST00000480525 ADGRF2Q8IZF7 708 aa5.44□□□□□ -1.54
HDAC6-223ENST00000480525 ZDHHC14Q8IZN3 488 aa5.44□□□□□ -1.54
HDAC6-223ENST00000480525 UBR7Q8N806 425 aa5.44□□□□□ -1.54
HDAC6-223ENST00000480525 KREMEN2Q8NCW0 462 aa5.44□□□□□ -1.54
HDAC6-223ENST00000480525 ZSWIM2Q8NEG5 633 aa5.44□□□□□ -1.54
HDAC6-223ENST00000480525 ANKRD20A12PQ8NF67 263 aa5.44□□□□□ -1.54
HDAC6-223ENST00000480525 MYCBPAPQ8TBZ2 947 aa5.44□□□□□ -1.54
HDAC6-223ENST00000480525 MICAL1Q8TDZ2 1067 aa5.44□□□□□ -1.54
HDAC6-223ENST00000480525 OVCA2Q8WZ82 227 aa5.44□□□□□ -1.54
HDAC6-223ENST00000480525 PSMG2Q969U7 264 aa5.44□□□□□ -1.54
HDAC6-223ENST00000480525 E2F7Q96AV8 911 aa5.44□□□□□ -1.54
HDAC6-223ENST00000480525 CCDC127Q96BQ5 260 aa5.44□□□□□ -1.54
HDAC6-223ENST00000480525 ASB2Q96Q27 587 aa5.44□□□□□ -1.54
HDAC6-223ENST00000480525 RTP3Q9BQQ7 232 aa5.44□□□□□ -1.54
HDAC6-223ENST00000480525 PHF7Q9BWX1 381 aaPredicted RBP5.44□□□□□ -1.54
HDAC6-223ENST00000480525 SRRTQ9BXP5 876 aaKnown RBP5.44□□□□□ -1.54
HDAC6-223ENST00000480525 ELOVL4Q9GZR5 314 aa5.44□□□□□ -1.54
HDAC6-223ENST00000480525 CERS4Q9HA82 394 aa5.44□□□□□ -1.54
HDAC6-223ENST00000480525 CSNK1G1Q9HCP0 422 aa5.44□□□□□ -1.54
HDAC6-223ENST00000480525 WDR6Q9NNW5 1121 aaKnown RBP5.44□□□□□ -1.54
HDAC6-223ENST00000480525 CYLDQ9NQC7 956 aa5.44□□□□□ -1.54
HDAC6-223ENST00000480525 GDE1Q9NZC3 331 aa5.44□□□□□ -1.54
HDAC6-223ENST00000480525 LIMA1Q9UHB6 759 aaKnown RBP5.44□□□□□ -1.54
HDAC6-223ENST00000480525 MYO6Q9UM54 1294 aa5.44□□□□□ -1.54
HDAC6-223ENST00000480525 BARX2Q9UMQ3 279 aaPredicted RBP5.44□□□□□ -1.54
HDAC6-223ENST00000480525 L1RE1Q9UN81 338 aa5.44□□□□□ -1.54
HDAC6-223ENST00000480525 CTNND2Q9UQB3 1225 aa5.44□□□□□ -1.54
HDAC6-223ENST00000480525 MAPK8IP1Q9UQF2 711 aa5.44□□□□□ -1.54
HDAC6-223ENST00000480525 NFE2L3Q9Y4A8 694 aa5.44□□□□□ -1.54
HDAC6-223ENST00000480525 SNX9Q9Y5X1 595 aa5.44□□□□□ -1.54
HDAC6-223ENST00000480525 CDY1Q9Y6F8 540 aa5.44□□□□□ -1.54
HDAC6-223ENST00000480525 ATP8B3O60423 1300 aa5.44□□□□□ -1.54
HDAC6-223ENST00000480525 F5P12259 2224 aa5.43□□□□□ -1.54
HDAC6-223ENST00000480525 A0A1W2PQC6 194 aa5.43□□□□□ -1.54
HDAC6-223ENST00000480525 MTMR11A4FU01 709 aa5.43□□□□□ -1.54
HDAC6-223ENST00000480525 LOC730098B7Z3J9 87 aa5.43□□□□□ -1.54
HDAC6-223ENST00000480525 F8W810 466 aa5.43□□□□□ -1.54
HDAC6-223ENST00000480525 RFXAPO00287 272 aa5.43□□□□□ -1.54
HDAC6-223ENST00000480525 ZNF197O14709 1029 aa5.43□□□□□ -1.54
HDAC6-223ENST00000480525 PPEF2O14830 753 aa5.43□□□□□ -1.54
HDAC6-223ENST00000480525 TRIM66O15016 1216 aa5.43□□□□□ -1.54
HDAC6-223ENST00000480525 MBTPS2O43462 519 aa5.43□□□□□ -1.54
HDAC6-223ENST00000480525 PHACTR2O75167 634 aa5.43□□□□□ -1.54
HDAC6-223ENST00000480525 CILPO75339 1184 aa5.43□□□□□ -1.54
HDAC6-223ENST00000480525 C8AP07357 584 aa5.43□□□□□ -1.54
HDAC6-223ENST00000480525 TPM2P07951 284 aa5.43□□□□□ -1.54
HDAC6-223ENST00000480525 CSH1P0DML2 217 aa5.43□□□□□ -1.54
HDAC6-223ENST00000480525 CSH2P0DML3 217 aa5.43□□□□□ -1.54
HDAC6-223ENST00000480525 BMP1P13497 986 aa5.43□□□□□ -1.54
HDAC6-223ENST00000480525 DDX6P26196 483 aaKnown RBP eCLIP5.43□□□□□ -1.54
HDAC6-223ENST00000480525 ELF1P32519 619 aa5.43□□□□□ -1.54
HDAC6-223ENST00000480525 PIK3CAP42336 1068 aa5.43□□□□□ -1.54
HDAC6-223ENST00000480525 BRCC3P46736 316 aa5.43□□□□□ -1.54
HDAC6-223ENST00000480525 ZNF445P59923 1031 aa5.43□□□□□ -1.54
HDAC6-223ENST00000480525 MYL6P60660 151 aa5.43□□□□□ -1.54
HDAC6-223ENST00000480525 BIRC3Q13489 604 aa5.43□□□□□ -1.54
HDAC6-223ENST00000480525 NCAPHQ15003 741 aa5.43□□□□□ -1.54
HDAC6-223ENST00000480525 CCDC40Q4G0X9 1142 aa5.43□□□□□ -1.54
HDAC6-223ENST00000480525 CBWD6Q4V339 395 aa5.43□□□□□ -1.54
HDAC6-223ENST00000480525 PABPC1LQ4VXU2 614 aaKnown RBP5.43□□□□□ -1.54
HDAC6-223ENST00000480525 TCP11X2Q5H9J9 407 aa5.43□□□□□ -1.54
HDAC6-223ENST00000480525 FIGNQ5HY92 759 aa5.43□□□□□ -1.54
HDAC6-223ENST00000480525 CBWD3Q5JTY5 395 aa5.43□□□□□ -1.54
HDAC6-223ENST00000480525 MIIPQ5JXC2 388 aa5.43□□□□□ -1.54
HDAC6-223ENST00000480525 CBWD5Q5RIA9 395 aa5.43□□□□□ -1.54
HDAC6-223ENST00000480525 ATAT1Q5SQI0 421 aa5.43□□□□□ -1.54
HDAC6-223ENST00000480525 SNX30Q5VWJ9 437 aa5.43□□□□□ -1.54
HDAC6-223ENST00000480525 WSCD1Q658N2 575 aa5.43□□□□□ -1.54
HDAC6-223ENST00000480525 ARHGAP17Q68EM7 881 aa5.43□□□□□ -1.54
HDAC6-223ENST00000480525 TRIM65Q6PJ69 517 aa5.43□□□□□ -1.54
HDAC6-223ENST00000480525 GBP6Q6ZN66 633 aa5.43□□□□□ -1.54
HDAC6-223ENST00000480525 TAS1R1Q7RTX1 841 aa5.43□□□□□ -1.54
HDAC6-223ENST00000480525 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.43□□□□□ -1.54
HDAC6-223ENST00000480525 ADHFE1Q8IWW8 467 aa5.43□□□□□ -1.54
HDAC6-223ENST00000480525 RDH13Q8NBN7 331 aa5.43□□□□□ -1.54
HDAC6-223ENST00000480525 B3GALNT2Q8NCR0 500 aa5.43□□□□□ -1.54
HDAC6-223ENST00000480525 OR10T2Q8NGX3 314 aa5.43□□□□□ -1.54
HDAC6-223ENST00000480525 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.43□□□□□ -1.54
HDAC6-223ENST00000480525 FAM200AQ8TCP9 573 aa5.43□□□□□ -1.54
HDAC6-223ENST00000480525 TAS1R2Q8TE23 839 aa5.43□□□□□ -1.54
HDAC6-223ENST00000480525 STK32AQ8WU08 396 aa5.43□□□□□ -1.54
HDAC6-223ENST00000480525 ZNF707Q96C28 371 aaPredicted RBP5.43□□□□□ -1.54
HDAC6-223ENST00000480525 FAM212AQ96EL1 285 aa5.43□□□□□ -1.54
HDAC6-223ENST00000480525 CNOT6LQ96LI5 555 aaKnown RBP5.43□□□□□ -1.54
HDAC6-223ENST00000480525 C8orf48Q96LL4 319 aa5.43□□□□□ -1.54
HDAC6-223ENST00000480525 NT5C1BQ96P26 610 aa5.43□□□□□ -1.54
HDAC6-223ENST00000480525 ERGIC2Q96RQ1 377 aa5.43□□□□□ -1.54
HDAC6-223ENST00000480525 HNRNPABQ99729 332 aaKnown RBP5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms