RNA–Protein interactions for RNA: ENST00000480495.1

TDP2-205, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

TSL 1 (best)

Gene TDP2, Length 714 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-205ENST00000480495 PTPRJQ12913 1337 aa16.15■□□□□ 0.18
TDP2-205ENST00000480495 TSC2P49815 1807 aa16.15■□□□□ 0.18
TDP2-205ENST00000480495 TNNI1P19237 187 aa16.14■□□□□ 0.17
TDP2-205ENST00000480495 LHX1P48742 406 aa16.14■□□□□ 0.17
TDP2-205ENST00000480495 NDUFA8P51970 172 aa16.14■□□□□ 0.17
TDP2-205ENST00000480495 STK4Q13043 487 aa16.14■□□□□ 0.17
TDP2-205ENST00000480495 NFE2Q16621 373 aaPredicted RBP16.14■□□□□ 0.17
TDP2-205ENST00000480495 MGAT5BQ3V5L5 792 aa16.14■□□□□ 0.17
TDP2-205ENST00000480495 FAM78AQ5JUQ0 283 aa16.14■□□□□ 0.17
TDP2-205ENST00000480495 TANGO2Q6ICL3 276 aa16.14■□□□□ 0.17
TDP2-205ENST00000480495 POTEHQ6S545 545 aa16.14■□□□□ 0.17
TDP2-205ENST00000480495 DNAJB7Q7Z6W7 309 aaPredicted RBP16.14■□□□□ 0.17
TDP2-205ENST00000480495 SHKBP1Q8TBC3 707 aa16.14■□□□□ 0.17
TDP2-205ENST00000480495 TMEM174Q8WUU8 243 aa16.14■□□□□ 0.17
TDP2-205ENST00000480495 SMARCD2Q92925 531 aa16.14■□□□□ 0.17
TDP2-205ENST00000480495 CCDC47Q96A33 483 aaKnown RBP16.14■□□□□ 0.17
TDP2-205ENST00000480495 HPDLQ96IR7 371 aa16.14■□□□□ 0.17
TDP2-205ENST00000480495 FAM84AQ96KN4 292 aa16.14■□□□□ 0.17
TDP2-205ENST00000480495 CGRRF1Q99675 332 aa16.14■□□□□ 0.17
TDP2-205ENST00000480495 TRPV4Q9HBA0 871 aa16.14■□□□□ 0.17
TDP2-205ENST00000480495 DDX43Q9NXZ2 648 aaKnown RBP16.14■□□□□ 0.17
TDP2-205ENST00000480495 PCDHB5Q9Y5E4 795 aa16.14■□□□□ 0.17
TDP2-205ENST00000480495 EXOC3O60645 756 aa16.13■□□□□ 0.17
TDP2-205ENST00000480495 SOAT2O75908 522 aa16.13■□□□□ 0.17
TDP2-205ENST00000480495 RPN1P04843 607 aaKnown RBP16.13■□□□□ 0.17
TDP2-205ENST00000480495 DLATP10515 647 aaKnown RBP16.13■□□□□ 0.17
TDP2-205ENST00000480495 HAPLN1P10915 354 aaPredicted RBP16.13■□□□□ 0.17
TDP2-205ENST00000480495 FCARP24071 287 aa16.13■□□□□ 0.17
TDP2-205ENST00000480495 PCSK1P29120 753 aa16.13■□□□□ 0.17
TDP2-205ENST00000480495 STARD6P59095 220 aa16.13■□□□□ 0.17
TDP2-205ENST00000480495 PRKCQQ04759 706 aa16.13■□□□□ 0.17
TDP2-205ENST00000480495 TEAD2Q15562 447 aa16.13■□□□□ 0.17
TDP2-205ENST00000480495 SLC44A4Q53GD3 710 aa16.13■□□□□ 0.17
TDP2-205ENST00000480495 SCARA3Q6AZY7 606 aa16.13■□□□□ 0.17
TDP2-205ENST00000480495 TRAPPC11Q7Z392 1133 aa16.13■□□□□ 0.17
TDP2-205ENST00000480495 LIMS2Q7Z4I7 341 aa16.13■□□□□ 0.17
TDP2-205ENST00000480495 ADGRF2Q8IZF7 708 aa16.13■□□□□ 0.17
TDP2-205ENST00000480495 FSIP1Q8NA03 581 aa16.13■□□□□ 0.17
TDP2-205ENST00000480495 KIAA0895Q8NCT3 520 aa16.13■□□□□ 0.17
TDP2-205ENST00000480495 FAM200AQ8TCP9 573 aa16.13■□□□□ 0.17
TDP2-205ENST00000480495 E2F7Q96AV8 911 aa16.13■□□□□ 0.17
TDP2-205ENST00000480495 ZSWIM3Q96MP5 696 aa16.13■□□□□ 0.17
TDP2-205ENST00000480495 PLA2G2FQ9BZM2 168 aa16.13■□□□□ 0.17
TDP2-205ENST00000480495 SLITRK6Q9H5Y7 841 aa16.13■□□□□ 0.17
TDP2-205ENST00000480495 ABCB6Q9NP58 842 aa16.13■□□□□ 0.17
TDP2-205ENST00000480495 ABI2Q9NYB9 513 aaPredicted RBP16.13■□□□□ 0.17
TDP2-205ENST00000480495 A0A1W2PRU2 124 aa16.12■□□□□ 0.17
TDP2-205ENST00000480495 NRG2O14511 850 aaPredicted RBP16.12■□□□□ 0.17
TDP2-205ENST00000480495 GABRDO14764 452 aa16.12■□□□□ 0.17
TDP2-205ENST00000480495 PI15O43692 258 aa16.12■□□□□ 0.17
TDP2-205ENST00000480495 KIF20AO95235 890 aa16.12■□□□□ 0.17
TDP2-205ENST00000480495 GJA1P17302 382 aa16.12■□□□□ 0.17
TDP2-205ENST00000480495 NUCB2P80303 420 aa16.12■□□□□ 0.17
TDP2-205ENST00000480495 MLF2Q15773 248 aaPredicted RBP16.12■□□□□ 0.17
TDP2-205ENST00000480495 SOWAHAQ2M3V2 549 aa16.12■□□□□ 0.17
TDP2-205ENST00000480495 INTS6LQ5JSJ4 861 aaKnown RBP16.12■□□□□ 0.17
TDP2-205ENST00000480495 SLC9A9Q8IVB4 645 aa16.12■□□□□ 0.17
TDP2-205ENST00000480495 ZSCAN18Q8TBC5 510 aaPredicted RBP16.12■□□□□ 0.17
TDP2-205ENST00000480495 DEPDC1BQ8WUY9 529 aa16.12■□□□□ 0.17
TDP2-205ENST00000480495 CCDC127Q96BQ5 260 aa16.12■□□□□ 0.17
TDP2-205ENST00000480495 CCDC34Q96HJ3 373 aa16.12■□□□□ 0.17
TDP2-205ENST00000480495 DMAC2Q9NW81 257 aa16.12■□□□□ 0.17
TDP2-205ENST00000480495 PDXKO00764 312 aa16.11■□□□□ 0.17
TDP2-205ENST00000480495 RHOBTB3O94955 611 aa16.11■□□□□ 0.17
TDP2-205ENST00000480495 FAM163BP0C2L3 166 aa16.11■□□□□ 0.17
TDP2-205ENST00000480495 ATF6P18850 670 aa16.11■□□□□ 0.17
TDP2-205ENST00000480495 CDC25CP30307 473 aa16.11■□□□□ 0.17
TDP2-205ENST00000480495 SNW1Q13573 536 aaKnown RBP16.11■□□□□ 0.17
TDP2-205ENST00000480495 TAF12Q16514 161 aa16.11■□□□□ 0.17
TDP2-205ENST00000480495 ARHGAP15Q53QZ3 475 aa16.11■□□□□ 0.17
TDP2-205ENST00000480495 KRBA2Q6ZNG9 492 aa16.11■□□□□ 0.17
TDP2-205ENST00000480495 GAREM2Q75VX8 874 aa16.11■□□□□ 0.17
TDP2-205ENST00000480495 CCDC105Q8IYK2 499 aa16.11■□□□□ 0.17
TDP2-205ENST00000480495 DTWD2Q8NBA8 298 aa16.11■□□□□ 0.17
TDP2-205ENST00000480495 DNASE1L2Q92874 299 aa16.11■□□□□ 0.17
TDP2-205ENST00000480495 GCNAQ96QF7 691 aa16.11■□□□□ 0.17
TDP2-205ENST00000480495 PKMYT1Q99640 499 aa16.11■□□□□ 0.17
TDP2-205ENST00000480495 LPIN3Q9BQK8 851 aa16.11■□□□□ 0.17
TDP2-205ENST00000480495 TRMT61BQ9BVS5 477 aaKnown RBP16.11■□□□□ 0.17
TDP2-205ENST00000480495 KCTD10Q9H3F6 313 aa16.11■□□□□ 0.17
TDP2-205ENST00000480495 ZNF334Q9HCZ1 680 aaPredicted RBP16.11■□□□□ 0.17
TDP2-205ENST00000480495 TMLHEQ9NVH6 421 aa16.11■□□□□ 0.17
TDP2-205ENST00000480495 SIT1Q9Y3P8 196 aa16.11■□□□□ 0.17
TDP2-205ENST00000480495 WDFY4Q6ZS81 3184 aa16.1■□□□□ 0.17
TDP2-205ENST00000480495 TCHHQ07283 1943 aa16.1■□□□□ 0.17
TDP2-205ENST00000480495 H0Y858 1186 aa16.1■□□□□ 0.17
TDP2-205ENST00000480495 ZNF202O95125 648 aa16.1■□□□□ 0.17
TDP2-205ENST00000480495 PSMC3P17980 439 aa16.1■□□□□ 0.17
TDP2-205ENST00000480495 ACAT1P24752 427 aaKnown RBP16.1■□□□□ 0.17
TDP2-205ENST00000480495 GABRR2P28476 465 aa16.1■□□□□ 0.17
TDP2-205ENST00000480495 ATICP31939 592 aa16.1■□□□□ 0.17
TDP2-205ENST00000480495 AP3M2P53677 418 aa16.1■□□□□ 0.17
TDP2-205ENST00000480495 RPL10AP62906 217 aaKnown RBP16.1■□□□□ 0.17
TDP2-205ENST00000480495 DPYDQ12882 1025 aa16.1■□□□□ 0.17
TDP2-205ENST00000480495 VITQ6UXI7 678 aa16.1■□□□□ 0.17
TDP2-205ENST00000480495 OSTM1Q86WC4 334 aa16.1■□□□□ 0.17
TDP2-205ENST00000480495 PJA1Q8NG27 643 aa16.1■□□□□ 0.17
TDP2-205ENST00000480495 ATOH1Q92858 354 aaPredicted RBP16.1■□□□□ 0.17
TDP2-205ENST00000480495 IRF7Q92985 503 aa16.1■□□□□ 0.17
TDP2-205ENST00000480495 FUBP3Q96I24 572 aaKnown RBP eCLIP16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms